Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0024610 | OGI:11010520 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:30143321-30146707 | ||||||||
| Gene Symbol | RLCK356, OsRLCK356, EXS, OsEXS, MRKc, MRKc, RKc, TRKc | ||||||||||
| DNA seq | ctagtattgccgaggcctctgcatttccagcatagatgcagagtaatccttcttgatccctttcagctttgaaactacatcattcattgccatcctttgctcaggtgactcactcgaacacagcaggcctagctcaaatatcgacataaggaagctgttactcctgccagtcgaggaagatcccaatgacgtattctggtgatcaaaacaaagacgtgtttcttcgtctagcagtagatgctcatcggcaacatcaataagattctcaggaaatgattgagaaacccacagcctcagggtcaatccaccaatgaacatgggatctgtaggcctcttcccagtaaacacctcgagcagcatgattccgaagctgaacacatcgctcttccgtgatgcctttcccatgaatgcatactctgtcagagaaatttaggaagtcaactgaaaaaagtttgctaaaaatttaaatgaaaacacatgtttcttgggggaaaaaatgtatgtggctttagattggctagtgtaagtacctggtgccatgtacccaattgtgcctggcatgcttgctgaaactgctgaattgtcatcccctaacaacatctttgctatgccaaagtctgctacatgtgcagtcatctcttcatcaaatagcacgttgctaggtttcaaatcacaatgcaggacgacctcatggtgttcatgatgcagatattccatagccattgacacatctaggataatctccatccttttgaggaatgatcccacacaaggcctgctttcagagtgcaagtatgactccaagtttccattgggcatgaactgaagaaacagtgctctgaaatccaagttggaacatgtatttagtatctttatcaggttgcgatgtctggccatccgcaagacatggcactctgcatcaaaactcctaatagctcgttcaacctgcatgttgaggattttgattgcaaccaccaaaccgtcatccagccgacccttgaaaactttgccaaaacttccaactccaagtaggttgtcctcattgaaattttcggtagcgcgaacgatttcttggtaggacactagcctgtggcaaatcgcatctgctatgccaaaagaagccgtaatatctggatttttcattttctttgcaatcattaggtataggaacacaacaatggcaccaaacgccgcaatgacagtagggagcacaatcttcagcaagtgttttgttctagtcgagtcggacttctccagacatgcaggaaatcccagacgtggagcaccacagagtccagcatttcccattaaagattgcatagtgatgtttgaaaaaatacctccacttggtatctgaccttgtagattgttaaaggagaggttcaaagaagtaagataggttaagttggaaaagtattttggtatgcctcctgaaagattgttatgagacagatccaatgtttctaaattaattagacctttgaaagagtctggaattgaatcattgaatgtgttttgagataaattcaggtagcttgacagttggagctgtcccaacgaagttgggaggctaccgaccaaattatttgctgagatgtccattaggcctattactttgaaggaactgagatcagaaggcaatgaaccagtaaagttattattagaaatatctagttggagaagattactaagattaactaagcttgcgggtataactgatgacaacctattatatgacagaaataagtactgcaacgtgcttagattgccaacaccgttagggatggaactagaaagattgttgccactgagagataatgcgaccattccttttggggtaccaatttgtcctgggattggtccaaacaaattgtttatagagaggtccaatgcctgtagattatccattagcattatagaatctggaattgtgccgcttatttggttgtcaaaaaggcctattacattcaggttagtcagatttgatatggtagcgggaatactgccagttaagttgttattgtttgcataaaaagattgtaagttgttagagaggtttgctagtaaactcgcagaaatgctccctgagaaagaattcattcctatgtcgaggaattggagttccctacaattggagagaagggcaaagaagtgaagtttcccttgtagatgattttttcctataccaagggagtatagagacctgaggttcccaagggtctcaggtacttgtccggtcagcaggttagattctaatcctagaaaagataattttgtcaagttaccaagggaggtaggaaaaggaccagttaggcgattaaatgagaggtgcaagatgttgagttgtgtaatctttcctagttccaatggaatgattccacttagcttgcaagatgacagatcaagcacggtgagcttggtgagattgcttagcacaactgggatcgaaccgacaagctcattctgacctataaccaaggtgcttagcagggacaagcccgctaaccattccggcacatgatccgtcaagagattcccacctaactcaagcatctggagtttccggcatgccgcaagcccaggtggaattcggcctgtgaatccgttgaaagagagacacatcacccgaatcatggggatgctaataaaggtctggtttccagctgggtgtgggataggtccagtgagattgtttcgagtggcatacagcttttcaagtctggacatgttgaagatggctgggggcagtgagccggacaattgattgtgctctagaacaaggacctgcagcacgtgcaacgagaatatcacgtgcggtattggccctgacaagctgttgttgccaatgctgagataacctaacaatggggtgttgttgaatagagtgttgggaatcgagccactgagatagttcctacggagattcatgctgccaaggcttcgcaggccctgcagctctgctgggattggaccagatagccggttaaactggagatcaagaagctcaagtttggtgaggtttcctatggtggctgggatgttacctgacagagcattgtagccaagatcaaggagctccaggcgatgcagccttcctataacacccgggagtgtccccgtgaggctggtgttggcgaggttgaggacgatgaggaaagagaggttaccgaggtgaggggtgatcgacccttgcaggggaatgcccggcagctccagggcggtgacgcgctgccggcggcggctgcacgacacgccgatccactggcagaagcaggatgcattgtcctccctccagccgtcacggaggaagcccagagggtcagagacctgtgccttgaaggcaagcagcgcggcgatgtcggtatcattgctcggctcatccgccat
More
|
||||||||||
| CDS seq | atggcggatgagccgagcaatgataccgacatcgccgcgctgcttgccttcaaggcacaggtctctgaccctctgggcttcctccgtgacggctggagggaggacaatgcatcctgcttctgccagtggatcggcgtgtcgtgcagccgccgccggcagcgcgtcaccgccctggagctgccgggcattcccctgcaagggtcgatcacccctcacctcggtaacctctctttcctcatcgtcctcaacctcgccaacaccagcctcacggggacactcccgggtgttataggaaggctgcatcgcctggagctccttgatcttggctacaatgctctgtcaggtaacatcccagccaccataggaaacctcaccaaacttgagcttcttgatctccagtttaaccggctatctggtccaatcccagcagagctgcagggcctgcgaagccttggcagcatgaatctccgtaggaactatctcagtggctcgattcccaacactctattcaacaacaccccattgttaggttatctcagcattggcaacaacagcttgtcagggccaataccgcacgtgatattctcgttgcacgtgctgcaggtccttgttctagagcacaatcaattgtccggctcactgcccccagccatcttcaacatgtccagacttgaaaagctgtatgccactcgaaacaatctcactggacctatcccacacccagctggaaaccagacctttattagcatccccatgattcgggtgatgtgtctctctttcaacggattcacaggccgaattccacctgggcttgcggcatgccggaaactccagatgcttgagttaggtgggaatctcttgacggatcatgtgccggaatggttagcgggcttgtccctgctaagcaccttggttataggtcagaatgagcttgtcggttcgatcccagttgtgctaagcaatctcaccaagctcaccgtgcttgatctgtcatcttgcaagctaagtggaatcattccattggaactaggaaagattacacaactcaacatcttgcacctctcatttaatcgcctaactggtccttttcctacctcccttggtaacttgacaaaattatcttttctaggattagaatctaacctgctgaccggacaagtacctgagacccttgggaacctcaggtctctatactcccttggtataggaaaaaatcatctacaagggaaacttcacttctttgcccttctctccaattgtagggaactccaattcctcgacataggaatgaattctttctcagggagcatttctgcgagtttactagcaaacctctctaacaacttacaatctttttatgcaaacaataacaacttaactggcagtattcccgctaccatatcaaatctgactaacctgaatgtaataggcctttttgacaaccaaataagcggcacaattccagattctataatgctaatggataatctacaggcattggacctctctataaacaatttgtttggaccaatcccaggacaaattggtaccccaaaaggaatggtcgcattatctctcagtggcaacaatctttctagttccatccctaacggtgttggcaatctaagcacgttgcagtacttatttctgtcatataataggttgtcatcagttatacccgcaagcttagttaatcttagtaatcttctccaactagatatttctaataataactttactggttcattgccttctgatctcagttccttcaaagtaataggcctaatggacatctcagcaaataatttggtcggtagcctcccaacttcgttgggacagctccaactgtcaagctacctgaatttatctcaaaacacattcaatgattcaattccagactctttcaaaggtctaattaatttagaaacattggatctgtctcataacaatctttcaggaggcataccaaaatacttttccaacttaacctatcttacttctttgaacctctcctttaacaatctacaaggtcagataccaagtggaggtattttttcaaacatcactatgcaatctttaatgggaaatgctggactctgtggtgctccacgtctgggatttcctgcatgtctggagaagtccgactcgactagaacaaaacacttgctgaagattgtgctccctactgtcattgcggcgtttggtgccattgttgtgttcctatacctaatgattgcaaagaaaatgaaaaatccagatattacggcttcttttggcatagcagatgcgatttgccacaggctagtgtcctaccaagaaatcgttcgcgctaccgaaaatttcaatgaggacaacctacttggagttggaagttttggcaaagttttcaagggtcggctggatgacggtttggtggttgcaatcaaaatcctcaacatgcaggttgaacgagctattaggagttttgatgcagagtgccatgtcttgcggatggccagacatcgcaacctgataaagatactaaatacatgttccaacttggatttcagagcactgtttcttcagttcatgcccaatggaaacttggagtcatacttgcactctgaaagcaggccttgtgtgggatcattcctcaaaaggatggagattatcctagatgtgtcaatggctatggaatatctgcatcatgaacaccatgaggtcgtcctgcattgtgatttgaaacctagcaacgtgctatttgatgaagagatgactgcacatgtagcagactttggcatagcaaagatgttgttaggggatgacaattcagcagtttcagcaagcatgccaggcacaattgggtacatggcaccagagtatgcattcatgggaaaggcatcacggaagagcgatgtgttcagcttcggaatcatgctgctcgaggtgtttactgggaagaggcctacagatcccatgttcattggtggattgaccctgaggctgtgggtttctcaatcatttcctgagaatcttattgatgttgccgatgagcatctactgctagacgaagaaacacgtctttgttttgatcaccagaatacgtcattgggatcttcctcgactggcaggagtaacagcttccttatgtcgatatttgagctaggcctgctgtgttcgagtgagtcacctgagcaaaggatggcaatgaatgatgtagtttcaaagctgaaagggatcaagaaggattactctgcatctatgctggaaatgcagaggcctcggcaatactag
More
|
||||||||||
| Protein seq | MADEPSNDTDIAALLAFKAQVSDPLGFLRDGWREDNASCFCQWIGVSCSRRRQRVTALELPGIPLQGSITPHLGNLSFLIVLNLANTSLTGTLPGVIGRLHRLELLDLGYNALSGNIPATIGNLTKLELLDLQFNRLSGPIPAELQGLRSLGSMNLRRNYLSGSIPNTLFNNTPLLGYLSIGNNSLSGPIPHVIFSLHVLQVLVLEHNQLSGSLPPAIFNMSRLEKLYATRNNLTGPIPHPAGNQTFISIPMIRVMCLSFNGFTGRIPPGLAACRKLQMLELGGNLLTDHVPEWLAGLSLLSTLVIGQNELVGSIPVVLSNLTKLTVLDLSSCKLSGIIPLELGKITQLNILHLSFNRLTGPFPTSLGNLTKLSFLGLESNLLTGQVPETLGNLRSLYSLGIGKNHLQGKLHFFALLSNCRELQFLDIGMNSFSGSISASLLANLSNNLQSFYANNNNLTGSIPATISNLTNLNVIGLFDNQISGTIPDSIMLMDNLQALDLSINNLFGPIPGQIGTPKGMVALSLSGNNLSSSIPNGVGNLSTLQYLFLSYNRLSSVIPASLVNLSNLLQLDISNNNFTGSLPSDLSSFKVIGLMDISANNLVGSLPTSLGQLQLSSYLNLSQNTFNDSIPDSFKGLINLETLDLSHNNLSGGIPKYFSNLTYLTSLNLSFNNLQGQIPSGGIFSNITMQSLMGNAGLCGAPRLGFPACLEKSDSTRTKHLLKIVLPTVIAAFGAIVVFLYLMIAKKMKNPDITASFGIADAICHRLVSYQEIVRATENFNEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQVERAIRSFDAECHVLRMARHRNLIKILNTCSNLDFRALFLQFMPNGNLESYLHSESRPCVGSFLKRMEIILDVSMAMEYLHHEHHEVVLHCDLKPSNVLFDEEMTAHVADFGIAKMLLGDDNSAVSASMPGTIGYMAPEYAFMGKASRKSDVFSFGIMLLEVFTGKRPTDPMFIGGLTLRLWVSQSFPENLIDVADEHLLLDEETRLCFDHQNTSLGSSSTGRSNSFLMSIFELGLLCSSESPEQRMAMNDVVSKLKGIKKDYSASMLEMQRPRQY |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0024610 | OsKeNa_11g0024610.01 | Chr11 | 30143321 | 30146707 | - | NAM | ||
| CDS seq | atggcggatgagccgagcaatgataccgacatcgccgcgctgcttgccttcaaggcacaggtctctgaccctctgggcttcctccgtgacggctggagggaggacaatgcatcctgcttctgccagtggatcggcgtgtcgtgcagccgccgccggcagcgcgtcaccgccctggagctgccgggcattcccctgcaagggtcgatcacccctcacctcggtaacctctctttcctcatcgtcctcaacctcgccaacaccagcctcacggggacactcccgggtgttataggaaggctgcatcgcctggagctccttgatcttggctacaatgctctgtcaggtaacatcccagccaccataggaaacctcaccaaacttgagcttcttgatctccagtttaaccggctatctggtccaatcccagcagagctgcagggcctgcgaagccttggcagcatgaatctccgtaggaactatctcagtggctcgattcccaacactctattcaacaacaccccattgttaggttatctcagcattggcaacaacagcttgtcagggccaataccgcacgtgatattctcgttgcacgtgctgcaggtccttgttctagagcacaatcaattgtccggctcactgcccccagccatcttcaacatgtccagacttgaaaagctgtatgccactcgaaacaatctcactggacctatcccacacccagctggaaaccagacctttattagcatccccatgattcgggtgatgtgtctctctttcaacggattcacaggccgaattccacctgggcttgcggcatgccggaaactccagatgcttgagttaggtgggaatctcttgacggatcatgtgccggaatggttagcgggcttgtccctgctaagcaccttggttataggtcagaatgagcttgtcggttcgatcccagttgtgctaagcaatctcaccaagctcaccgtgcttgatctgtcatcttgcaagctaagtggaatcattccattggaactaggaaagattacacaactcaacatcttgcacctctcatttaatcgcctaactggtccttttcctacctcccttggtaacttgacaaaattatcttttctaggattagaatctaacctgctgaccggacaagtacctgagacccttgggaacctcaggtctctatactcccttggtataggaaaaaatcatctacaagggaaacttcacttctttgcccttctctccaattgtagggaactccaattcctcgacataggaatgaattctttctcagggagcatttctgcgagtttactagcaaacctctctaacaacttacaatctttttatgcaaacaataacaacttaactggcagtattcccgctaccatatcaaatctgactaacctgaatgtaataggcctttttgacaaccaaataagcggcacaattccagattctataatgctaatggataatctacaggcattggacctctctataaacaatttgtttggaccaatcccaggacaaattggtaccccaaaaggaatggtcgcattatctctcagtggcaacaatctttctagttccatccctaacggtgttggcaatctaagcacgttgcagtacttatttctgtcatataataggttgtcatcagttatacccgcaagcttagttaatcttagtaatcttctccaactagatatttctaataataactttactggttcattgccttctgatctcagttccttcaaagtaataggcctaatggacatctcagcaaataatttggtcggtagcctcccaacttcgttgggacagctccaactgtcaagctacctgaatttatctcaaaacacattcaatgattcaattccagactctttcaaaggtctaattaatttagaaacattggatctgtctcataacaatctttcaggaggcataccaaaatacttttccaacttaacctatcttacttctttgaacctctcctttaacaatctacaaggtcagataccaagtggaggtattttttcaaacatcactatgcaatctttaatgggaaatgctggactctgtggtgctccacgtctgggatttcctgcatgtctggagaagtccgactcgactagaacaaaacacttgctgaagattgtgctccctactgtcattgcggcgtttggtgccattgttgtgttcctatacctaatgattgcaaagaaaatgaaaaatccagatattacggcttcttttggcatagcagatgcgatttgccacaggctagtgtcctaccaagaaatcgttcgcgctaccgaaaatttcaatgaggacaacctacttggagttggaagttttggcaaagttttcaagggtcggctggatgacggtttggtggttgcaatcaaaatcctcaacatgcaggttgaacgagctattaggagttttgatgcagagtgccatgtcttgcggatggccagacatcgcaacctgataaagatactaaatacatgttccaacttggatttcagagcactgtttcttcagttcatgcccaatggaaacttggagtcatacttgcactctgaaagcaggccttgtgtgggatcattcctcaaaaggatggagattatcctagatgtgtcaatggctatggaatatctgcatcatgaacaccatgaggtcgtcctgcattgtgatttgaaacctagcaacgtgctatttgatgaagagatgactgcacatgtagcagactttggcatagcaaagatgttgttaggggatgacaattcagcagtttcagcaagcatgccaggcacaattgggtacatggcaccagagtatgcattcatgggaaaggcatcacggaagagcgatgtgttcagcttcggaatcatgctgctcgaggtgtttactgggaagaggcctacagatcccatgttcattggtggattgaccctgaggctgtgggtttctcaatcatttcctgagaatcttattgatgttgccgatgagcatctactgctagacgaagaaacacgtctttgttttgatcaccagaatacgtcattgggatcttcctcgactggcaggagtaacagcttccttatgtcgatatttgagctaggcctgctgtgttcgagtgagtcacctgagcaaaggatggcaatgaatgatgtagtttcaaagctgaaagggatcaagaaggattactctgcatctatgctggaaatgcagaggcctcggcaatactag
More
|
|||||||
| Protein seq | MADEPSNDTDIAALLAFKAQVSDPLGFLRDGWREDNASCFCQWIGVSCSRRRQRVTALELPGIPLQGSITPHLGNLSFLIVLNLANTSLTGTLPGVIGRLHRLELLDLGYNALSGNIPATIGNLTKLELLDLQFNRLSGPIPAELQGLRSLGSMNLRRNYLSGSIPNTLFNNTPLLGYLSIGNNSLSGPIPHVIFSLHVLQVLVLEHNQLSGSLPPAIFNMSRLEKLYATRNNLTGPIPHPAGNQTFISIPMIRVMCLSFNGFTGRIPPGLAACRKLQMLELGGNLLTDHVPEWLAGLSLLSTLVIGQNELVGSIPVVLSNLTKLTVLDLSSCKLSGIIPLELGKITQLNILHLSFNRLTGPFPTSLGNLTKLSFLGLESNLLTGQVPETLGNLRSLYSLGIGKNHLQGKLHFFALLSNCRELQFLDIGMNSFSGSISASLLANLSNNLQSFYANNNNLTGSIPATISNLTNLNVIGLFDNQISGTIPDSIMLMDNLQALDLSINNLFGPIPGQIGTPKGMVALSLSGNNLSSSIPNGVGNLSTLQYLFLSYNRLSSVIPASLVNLSNLLQLDISNNNFTGSLPSDLSSFKVIGLMDISANNLVGSLPTSLGQLQLSSYLNLSQNTFNDSIPDSFKGLINLETLDLSHNNLSGGIPKYFSNLTYLTSLNLSFNNLQGQIPSGGIFSNITMQSLMGNAGLCGAPRLGFPACLEKSDSTRTKHLLKIVLPTVIAAFGAIVVFLYLMIAKKMKNPDITASFGIADAICHRLVSYQEIVRATENFNEDNLLGVGSFGKVFKGRLDDGLVVAIKILNMQVERAIRSFDAECHVLRMARHRNLIKILNTCSNLDFRALFLQFMPNGNLESYLHSESRPCVGSFLKRMEIILDVSMAMEYLHHEHHEVVLHCDLKPSNVLFDEEMTAHVADFGIAKMLLGDDNSAVSASMPGTIGYMAPEYAFMGKASRKSDVFSFGIMLLEVFTGKRPTDPMFIGGLTLRLWVSQSFPENLIDVADEHLLLDEETRLCFDHQNTSLGSSSTGRSNSFLMSIFELGLLCSSESPEQRMAMNDVVSKLKGIKKDYSASMLEMQRPRQY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 1.959447 | 0.097477 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0695800 | SBH | 0.068483 | 0.0 | 0.167381 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g47310 | SBH | 0.046286 | 0.0 | 0.043063 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0695800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024590 | RBH | 0.0 | 5.368335 | 1.046873 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024160 | RBH | 0.0 | 14.940664 | 4.490395 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0024120 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024440 | RBH | 0.0 | 2.110048 | 0.689818 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0444900 | RBH | 0.0035985 | 16.211173 | 0.0034995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024950 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0440500 | SBH | 0.005107 | 0.2015625 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024770 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024760 | RBH | 0.027641 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0024230 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023910 | SBH | 0.018860 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024350 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024320 | SBH | 0.088229 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024490 | RBH | 0.0 | 2.211889 | 0.0 |
