Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsCMeo_11g0008770 OGI:11022570 | 16/16 CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) Chr11:7375675-7381209
Gene Symbol -
DNA seq

atggggcattctccaacttcttggaggatcatccatctgttagtcttcctgatcattgttcttgaccacgctctcataatctcagcagatacagatccacaagatagtaagtgtttcagtctcattccagtttctggttaatttgctgtaaaaaactagattttgtttcatgatgatgtttcttcactctcatcgctttgtagcctctgccctaaatggcatagcagcttcctgggataacgccaagtccaagctatcagaatgggttggtaatgatccatgcggcgaaaaatggccaggagtgtactgcacccagaatcgtgtcacctcaatgtaagaaccattttagccaaatcaacatgatctttctcccctttgccctttcttatactttgtggaatcaacatgttgtttcctctatgtttcaactaatgattttctctctctcttttttctcggatggtttgcagaaggctgtcaagttttggattgtccggatcactttcaggtgacatacagtcattgtcagaattacagtacctgtatgtgctactatcttgtcaaattcgtgctaagctttccagtgctataaacaagacctgaaaacatggatcttgcttaatggtgctgaatctgtttgggcaagcttttgccttgtttgatgctgatgaatctattttgatcatatgcagggacttgtcttacaacaacttgagcggtccacttccaccgaacattggatccttgagtaaccttgaaagcctgtaagcacaaaattaaatgtttatgttagctcattgttggttgattaattcataacaaagtctgaagctggattattcaaaagtcataaactgatcatttgattagaacaaagattccatatcatgattttaatataatatcaattttaatttcattaatgaatcgcttctctcactttctcttgtgcatgacaggagcgttgttggctgccaattttctggtgacataccaaaagaactcagccaactcccaaagctgcggttcctgtaaagatctcaatgacttggaaaatattgttaatgatctcatatacctgcgtcattttttttatgttaataagaagttgtgacggtaaaaagttgtgacggtaaatgaagacagtagtttagacttagttgaaatttcaatttgaaaacccttcttttttcacattgacttatttgttagctcgaaaccatttccatttcattccaggtaaaacagaaaatagtttttatctgttttgggggatataacaaacaaaaggaaatgctaactgagtatcaactttgtattatttcttatagtatcatggtataagagttgatggattgtattgctgcaggtccttgaacaacaacaggtttactggaagtatacctccatcaattggcaacctttcaaatatgtactggcttgacttgggtgaaaatcgtctgactggatcacttccagtatctgatggaaccaatactggattggacaatttgacaaacgctctgcatttgtgagtacctttcttaaaatatctaccaggctttcagttcactcgcttccattctaaggaaaatgttcggactgctctttattcagtcattttggggtcaaccagctatcaggcaccataccaagccagctattcaaatcaaatatgaagctcatacatctgtaaggcaaagataaccttagataatatttgcaaactgtttcattacttttaatctgttatgtcatgctcaagattacccattgttcttgtcattcaggttgcttgataacaacaatttcactggcggcattcctcccacattgacccttttaactaaacttgaagtcctgtaagtgcatactttttctgagcaggcttataaccagctttcttctaactgagtgaccattcagtatataatccatacaactcaatatgcacaggcgtctcgacagaaattaccaactgactggacctgttcctgccagcatcaatagcctcacaaaactacaagaattgtaattttctggttactctgaatctctgatcagtatttgaatgtgctagccttcaattctaacaaataaccaaccttattctttgtcaggcatctagaaaacaataaattgacaggccctctgccagacttgacaggaatggattcactatatgttgtgtaagtgccgaacacactgtggtacactctactgaaattttatcataggaaacccttgtatctggcatattgaacttttggttcatttggccagtaaatacaactaatctgacaacacatttgcagctccatgggcaacaacaacttcagttcatccaatgttccaacctggttcacagctttgtcagccttgacttcactgtaattcttctctgcacactttttgtagaacacaaggatgcaattttttttacactcgctttcaaatctcggtaaatgcacaggaaccttgagaacctacacatcactggggagcttccgcagcctcttttcaaactcccggctatccagacactgtgagtggaattagtgttatctttgctcataatatgtggttacaagaactatgcactcaatgaacaaaaaaaaaagagtaaaggaaattgaacatgtcagtgctaactagcaaggtaaactggtggtggcaggggtcttaagggcaataatttcaacggcacactaaccatcggatcagactacagcagcacgctctcactgattgatttgcaggacaaccagatcaccactctcgccgtgagcggggctcagtacaacaagaaactcatgtaagatccatcaaatataccaagagaaattttacggtcctttaaaaagaacttcgaggtacctaaatttacactaaagattttggaacctcgagttacctagtacctggaggtatcaagttttacactagaaaatgtgatacctcctggtaccttctcaaggatgataaaattacccaatataccaattcttcagcatgtaggcgctcttatatatgctttcattcacactcccatgtttctcttctcatcacagacttgttgggaacccaatctgtgttcaggggaacaatgaggcactgtactgcaaaagctcacagcaagcgaaccctgcagcaaagccttactctactcaatccatttgtcctggattaccacccacatgcctgtcggaccagtatctcagccccaactgcacctgcgcggtgccatacatgggtactctgcacttccggtcaccaccgttcttcgacctaagcaacgatacattctttgtactcctcgaggaaaacatgaaagaagcgttcctgggcaagcagcttcctgttgagtccattgctctggataacccggcattcggtcctagcaacaacttggatataaacttgagagtgttcccaagcggaaagattcggttcggcaaagaagatatctcctacattgggttcatgctcaacaaccagacctacaagcctcatgctcctggtataaattatgggccatactatttcattgggcaatcctacccattcgctgagagtaagtcaactgttcgaaaatctcaactactgtagaattaatccactaccgaattccttttttttttttgttgaagaattggcactactgatttctagacttcttcatgattacacagcactatcagcacccagacagacgaaaaagaaccagtccctcatcattggtgtgtcagctggtggagcttttgttgttgtgtcactgcttgttctttttacagttctgtttttcaggaggaacaaaaggccaaagctgcagccacaacccaggagcccatcttacggtaagaagcattggataaaaaaaaaatcatgttttttgtccatttgagttgaccaacacatgagctggcaaataaaattacttaaatggctgtagcttcatgggacatcaagagcaccagcatcagcaccccgcatctccaaggcgcgcgggtgttcacattcgatgagctgaagaaaatcacaaacagcttctccgatgctaatgacattggaactggtggctatgggaaggtaatatatagtatatttgttgaaacgggtatgtgactatctttagtgcctgacatccaaagcgataatgctgatcaattgcaggtctacagaggagtactcccaaatgggcatctaattgcagtcaaaagatccgagcaagggtccttgcaaggcaacctagaattccggactgagatagagctcctatccagggttcatcacaagaaccttgtcagccttgtgggattttgctttgaccagggtgagcaaatgctggtctatgagtatgtgcccaatggcacactcaaggacagcctcacaggtgtgtccatatgttcagttatgcatgactgaatctgcaattctcctttgtgaaaataaacatattctgctcacatctttttcagggaagtctggggtgcgcctagattggaagagacggctgcgagtagtacttggtgcagcgaaaggcatcgcgtacctgcatgagcttgcagaccctccgatagtacacagggatataaagtcaagtaacattcttcttgatggaaacctccacacaaaggtttccgactttggtctctccaagcctctgaaccaggatggaaggggtcaggtcacaactcaagtgaaaggaaccatggtgagtttcacagctctcttaactgcaatactgcaacgattaagcacattggatactgtttcctggttatttttcatcaactctgtaagatgagtatacagagctgtttaaagattataaaatacttgtcatgtagggatatttggaccctgaatactacatgacccagcagttgaccgagaagagcgatgtctacagcttcggtgtgctactacttgaagtgataacggcgagaaagccattagagaggggaaggtacatcgtgcgtgaggtgaaaggtgcaatggataggaccaaggacctatatggcctccatgagctcctagacccaatgctagcacccacgtcgctggccggcttcgaactgtatgtcgacttggctttgaagtgcgtggaggaggcaggaatggaccgcccatcaatgagtgaggtggtggcggagattgagaagatcatgaagatggcaggcgtaaacccaaaggtcgactcggcatcaaactcgatgagctacaacagcaggacaccgcgtcatccatacagtggagagtctcaatttgattacagtggtggcatcccatcttcgtccagggttgaaccaaaatgatcggttcggtcggcccacaatgatctccatgtaaataacttggcgcttgtttgtttgtgtacagttcatcaaggttctgaactgcttcgtacagtgactttcttctggaatttctgtatgattaattagctaacaatctgggtgtgtaagttgttgtgctagaaatctcctgttggtaatgccttttatatacgacacttttttagtgttatctgtc

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CDS seq

atggggcattctccaacttcttggaggatcatccatctgttagtcttcctgatcattgttcttgaccacgctctcataatctcagcagatacagatccacaagatacctctgccctaaatggcatagcagcttcctgggataacgccaagtccaagctatcagaatgggttggtaatgatccatgcggcgaaaaatggccaggagtgtactgcacccagaatcgtgtcacctcaataaggctgtcaagttttggattgtccggatcactttcaggtgacatacagtcattgtcagaattacagtacctggacttgtcttacaacaacttgagcggtccacttccaccgaacattggatccttgagtaaccttgaaagcctgagcgttgttggctgccaattttctggtgacataccaaaagaactcagccaactcccaaagctgcggttcctgtccttgaacaacaacaggtttactggaagtatacctccatcaattggcaacctttcaaatatgtactggcttgacttgggtgaaaatcgtctgactggatcacttccagtatctgatggaaccaatactggattggacaatttgacaaacgctctgcattttcattttggggtcaaccagctatcaggcaccataccaagccagctattcaaatcaaatatgaagctcatacatctgttgcttgataacaacaatttcactggcggcattcctcccacattgacccttttaactaaacttgaagtcctgcgtctcgacagaaattaccaactgactggacctgttcctgccagcatcaatagcctcacaaaactacaagaattgcatctagaaaacaataaattgacaggccctctgccagacttgacaggaatggattcactatatgttgtctccatgggcaacaacaacttcagttcatccaatgttccaacctggttcacagctttgtcagccttgacttcactgaaccttgagaacctacacatcactggggagcttccgcagcctcttttcaaactcccggctatccagacactacttgttgggaacccaatctgtgttcaggggaacaatgaggcactgtactgcaaaagctcacagcaagcgaaccctgcagcaaagccttactctactcaatccatttgtcctggattaccacccacatgcctgtcggaccagtatctcagccccaactgcacctgcgcggtgccatacatgggtactctgcacttccggtcaccaccgttcttcgacctaagcaacgatacattctttgtactcctcgaggaaaacatgaaagaagcgttcctgggcaagcagcttcctgttgagtccattgctctggataacccggcattcggtcctagcaacaacttggatataaacttgagagtgttcccaagcggaaagattcggttcggcaaagaagatatctcctacattgggttcatgctcaacaaccagacctacaagcctcatgctcctggtataaattatgggccatactatttcattgggcaatcctacccattcgctgagacactatcagcacccagacagacgaaaaagaaccagtccctcatcattggtgtgtcagctggtggagcttttgttgttgtgtcactgcttgttctttttacagttctgtttttcaggaggaacaaaaggccaaagctgcagccacaacccaggagcccatcttacgcttcatgggacatcaagagcaccagcatcagcaccccgcatctccaaggcgcgcgggtgttcacattcgatgagctgaagaaaatcacaaacagcttctccgatgctaatgacattggaactggtggctatgggaaggtctacagaggagtactcccaaatgggcatctaattgcagtcaaaagatccgagcaagggtccttgcaaggcaacctagaattccggactgagatagagctcctatccagggttcatcacaagaaccttgtcagccttgtgggattttgctttgaccagggtgagcaaatgctggtctatgagtatgtgcccaatggcacactcaaggacagcctcacagggaagtctggggtgcgcctagattggaagagacggctgcgagtagtacttggtgcagcgaaaggcatcgcgtacctgcatgagcttgcagaccctccgatagtacacagggatataaagtcaagtaacattcttcttgatggaaacctccacacaaaggtttccgactttggtctctccaagcctctgaaccaggatggaaggggtcaggtcacaactcaagtgaaaggaaccatgggatatttggaccctgaatactacatgacccagcagttgaccgagaagagcgatgtctacagcttcggtgtgctactacttgaagtgataacggcgagaaagccattagagaggggaaggtacatcgtgcgtgaggtgaaaggtgcaatggataggaccaaggacctatatggcctccatgagctcctagacccaatgctagcacccacgtcgctggccggcttcgaactgtatgtcgacttggctttgaagtgcgtggaggaggcaggaatggaccgcccatcaatgagtgaggtggtggcggagattgagaagatcatgaagatggcaggcgtaaacccaaaggtcgactcggcatcaaactcgatgagctacaacagcaggacaccgcgtcatccatacagtggagagtctcaatttgattacagtggtggcatcccatcttcgtccagggttgaaccaaaatga

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Protein seq

MGHSPTSWRIIHLLVFLIIVLDHALIISADTDPQDTSALNGIAASWDNAKSKLSEWVGNDPCGEKWPGVYCTQNRVTSIRLSSFGLSGSLSGDIQSLSELQYLDLSYNNLSGPLPPNIGSLSNLESLSVVGCQFSGDIPKELSQLPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDLGENRLTGSLPVSDGTNTGLDNLTNALHFHFGVNQLSGTIPSQLFKSNMKLIHLLLDNNNFTGGIPPTLTLLTKLEVLRLDRNYQLTGPVPASINSLTKLQELHLENNKLTGPLPDLTGMDSLYVVSMGNNNFSSSNVPTWFTALSALTSLNLENLHITGELPQPLFKLPAIQTLLVGNPICVQGNNEALYCKSSQQANPAAKPYSTQSICPGLPPTCLSDQYLSPNCTCAVPYMGTLHFRSPPFFDLSNDTFFVLLEENMKEAFLGKQLPVESIALDNPAFGPSNNLDINLRVFPSGKIRFGKEDISYIGFMLNNQTYKPHAPGINYGPYYFIGQSYPFAETLSAPRQTKKNQSLIIGVSAGGAFVVVSLLVLFTVLFFRRNKRPKLQPQPRSPSYASWDIKSTSISTPHLQGARVFTFDELKKITNSFSDANDIGTGGYGKVYRGVLPNGHLIAVKRSEQGSLQGNLEFRTEIELLSRVHHKNLVSLVGFCFDQGEQMLVYEYVPNGTLKDSLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIVHRDIKSSNILLDGNLHTKVSDFGLSKPLNQDGRGQVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLEVITARKPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVEEAGMDRPSMSEVVAEIEKIMKMAGVNPKVDSASNSMSYNSRTPRHPYSGESQFDYSGGIPSSSRVEPK

Function Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsCMeo_11g0008770 OsCMeo_11g0008770.01 Chr11 7375675 7381209 + NAM
CDS seq

atggggcattctccaacttcttggaggatcatccatctgttagtcttcctgatcattgttcttgaccacgctctcataatctcagcagatacagatccacaagatacctctgccctaaatggcatagcagcttcctgggataacgccaagtccaagctatcagaatgggttggtaatgatccatgcggcgaaaaatggccaggagtgtactgcacccagaatcgtgtcacctcaataaggctgtcaagttttggattgtccggatcactttcaggtgacatacagtcattgtcagaattacagtacctggacttgtcttacaacaacttgagcggtccacttccaccgaacattggatccttgagtaaccttgaaagcctgagcgttgttggctgccaattttctggtgacataccaaaagaactcagccaactcccaaagctgcggttcctgtccttgaacaacaacaggtttactggaagtatacctccatcaattggcaacctttcaaatatgtactggcttgacttgggtgaaaatcgtctgactggatcacttccagtatctgatggaaccaatactggattggacaatttgacaaacgctctgcattttcattttggggtcaaccagctatcaggcaccataccaagccagctattcaaatcaaatatgaagctcatacatctgttgcttgataacaacaatttcactggcggcattcctcccacattgacccttttaactaaacttgaagtcctgcgtctcgacagaaattaccaactgactggacctgttcctgccagcatcaatagcctcacaaaactacaagaattgcatctagaaaacaataaattgacaggccctctgccagacttgacaggaatggattcactatatgttgtctccatgggcaacaacaacttcagttcatccaatgttccaacctggttcacagctttgtcagccttgacttcactgaaccttgagaacctacacatcactggggagcttccgcagcctcttttcaaactcccggctatccagacactacttgttgggaacccaatctgtgttcaggggaacaatgaggcactgtactgcaaaagctcacagcaagcgaaccctgcagcaaagccttactctactcaatccatttgtcctggattaccacccacatgcctgtcggaccagtatctcagccccaactgcacctgcgcggtgccatacatgggtactctgcacttccggtcaccaccgttcttcgacctaagcaacgatacattctttgtactcctcgaggaaaacatgaaagaagcgttcctgggcaagcagcttcctgttgagtccattgctctggataacccggcattcggtcctagcaacaacttggatataaacttgagagtgttcccaagcggaaagattcggttcggcaaagaagatatctcctacattgggttcatgctcaacaaccagacctacaagcctcatgctcctggtataaattatgggccatactatttcattgggcaatcctacccattcgctgagacactatcagcacccagacagacgaaaaagaaccagtccctcatcattggtgtgtcagctggtggagcttttgttgttgtgtcactgcttgttctttttacagttctgtttttcaggaggaacaaaaggccaaagctgcagccacaacccaggagcccatcttacgcttcatgggacatcaagagcaccagcatcagcaccccgcatctccaaggcgcgcgggtgttcacattcgatgagctgaagaaaatcacaaacagcttctccgatgctaatgacattggaactggtggctatgggaaggtctacagaggagtactcccaaatgggcatctaattgcagtcaaaagatccgagcaagggtccttgcaaggcaacctagaattccggactgagatagagctcctatccagggttcatcacaagaaccttgtcagccttgtgggattttgctttgaccagggtgagcaaatgctggtctatgagtatgtgcccaatggcacactcaaggacagcctcacagggaagtctggggtgcgcctagattggaagagacggctgcgagtagtacttggtgcagcgaaaggcatcgcgtacctgcatgagcttgcagaccctccgatagtacacagggatataaagtcaagtaacattcttcttgatggaaacctccacacaaaggtttccgactttggtctctccaagcctctgaaccaggatggaaggggtcaggtcacaactcaagtgaaaggaaccatgggatatttggaccctgaatactacatgacccagcagttgaccgagaagagcgatgtctacagcttcggtgtgctactacttgaagtgataacggcgagaaagccattagagaggggaaggtacatcgtgcgtgaggtgaaaggtgcaatggataggaccaaggacctatatggcctccatgagctcctagacccaatgctagcacccacgtcgctggccggcttcgaactgtatgtcgacttggctttgaagtgcgtggaggaggcaggaatggaccgcccatcaatgagtgaggtggtggcggagattgagaagatcatgaagatggcaggcgtaaacccaaaggtcgactcggcatcaaactcgatgagctacaacagcaggacaccgcgtcatccatacagtggagagtctcaatttgattacagtggtggcatcccatcttcgtccagggttgaaccaaaatga

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Protein seq

MGHSPTSWRIIHLLVFLIIVLDHALIISADTDPQDTSALNGIAASWDNAKSKLSEWVGNDPCGEKWPGVYCTQNRVTSIRLSSFGLSGSLSGDIQSLSELQYLDLSYNNLSGPLPPNIGSLSNLESLSVVGCQFSGDIPKELSQLPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDLGENRLTGSLPVSDGTNTGLDNLTNALHFHFGVNQLSGTIPSQLFKSNMKLIHLLLDNNNFTGGIPPTLTLLTKLEVLRLDRNYQLTGPVPASINSLTKLQELHLENNKLTGPLPDLTGMDSLYVVSMGNNNFSSSNVPTWFTALSALTSLNLENLHITGELPQPLFKLPAIQTLLVGNPICVQGNNEALYCKSSQQANPAAKPYSTQSICPGLPPTCLSDQYLSPNCTCAVPYMGTLHFRSPPFFDLSNDTFFVLLEENMKEAFLGKQLPVESIALDNPAFGPSNNLDINLRVFPSGKIRFGKEDISYIGFMLNNQTYKPHAPGINYGPYYFIGQSYPFAETLSAPRQTKKNQSLIIGVSAGGAFVVVSLLVLFTVLFFRRNKRPKLQPQPRSPSYASWDIKSTSISTPHLQGARVFTFDELKKITNSFSDANDIGTGGYGKVYRGVLPNGHLIAVKRSEQGSLQGNLEFRTEIELLSRVHHKNLVSLVGFCFDQGEQMLVYEYVPNGTLKDSLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIVHRDIKSSNILLDGNLHTKVSDFGLSKPLNQDGRGQVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLEVITARKPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVEEAGMDRPSMSEVVAEIEKIMKMAGVNPKVDSASNSMSYNSRTPRHPYSGESQFDYSGGIPSSSRVEPK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 3.494172 0.907374

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0245200 RBH 0.112508 0.000000 0.591653
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g14050 RBH 0.139109 0.229367 0.334446
Nipponbare | IRGSP 1.0 | RAP-db Os11g0245200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0008880 RBH 0.000000 1.340672 1.619075
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0008770 RBH 0.000000 0.358708 0.479379
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0021440 SBH 0.103214 0.731359 5.803705
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0008620 RBH 0.029922 0.054208 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0008700 RBH 1.190575 3.314458 2.556369
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0118300 RBH 0.7686545 30.5398405 2.095467
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0008730 RBH 0.009980 0.635749 0.189119
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0122500 RBH 0.860945 23.5238335 4.2400615
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0008790 RBH 0.017857 0.081060 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0008880 RBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0008790 RBH 0.480241 3.668327 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0008650 RBH 0.062674 0.0 0.175730
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0008800 RBH 0.070012 2.714940 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G008830 RBH 0.063060 0.132993 0.219405
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0008720 RBH 0.110739 12.105433 0.685932
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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