Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g14050 | OGI:11022570 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:7796547-7802609 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TGTTTTGGGTCGAATCGCGTTGGAAAATGCCTCACATACAACACAAGCACACAACAAAATGGTCCCAATCTTTGGTAATTTTCCAAAGTCAATCCTACCATAAATATACACCAAATAAAATCTACAACATTCAACCAAATATAATATGCATGCAATACATATAAATCTCTTAAAAGGAGTGATACTTCAAACATGGTAATAATAATTTGAATCAGTCAGATCCTAATTCATGGCAGATAACTTCATGCTCCCCTGCCAGCCAATAGCGTACAGTTGACTCGCATTGCTCTCTCTCTCGCTTGATAAAATTTGGGGCCTTCACCATTAATTGGATGATTTTTTAAAAGGCATCCATTGAGAGGAGATGACAGTCACATTCTTGACTGATTCCATTAACTAATACACAACTGATGTGCCTATTCAGCCTTCATAACATCGCGTAGTTGCAAGTGCACAAAATTTTAGTAGTGGAGAGTTGCTAACCTTGCATAAGAAAGGGCTTCTCAGCAACCTGAAATCAAGATCACTATGGGGCATTCTCCAACTTCTTGGAGGATCATCCATCTGTTAGTCTTCCTGATCATTGTTCTTGACCACGCTCTCATAATCTCAGCAGATACAGATCCACAAGATAGTAAGTGTTTCAGTCTCATTCCAGTTTCTGGTTAATTTGCTGTAAAAAACTAGATTTTGTTTCATGATGATGTTTCTTCACTCTCATCGCTTTGTAGCCTCTGCCCTAAATGGCATAGCAGCTTCCTGGGATAACGCCAAGTCCAAGCTATCAGAATGGGTTGGTAATGATCCATGCGGCGAAAAATGGCCAGGAGTGTACTGCACCCAGAATCGTGTCACCTCAATGTAAGAACCATTTTAGCCAAATCAACATGATCTTTCTCCCCTTTGCCCTTTCTTATACTTTGTGGAATCAACATGTTGTTTCCTCTATGTTTCAACTAATGATTTTCTCTCTCTCTTTTTTCTCGGATGGTTTGCAGAAGGCTGTCAAGTTTTGGATTGTCCGGATCACTTTCAGGTGACATACAGTCATTGTCAGAATTACAGTACCTGTATGTGCTACTATCTTGTCAAATTCGTGCTAAGCTTTCCAGTGCTATAAACAAGACCTGAAAACATGGATCTTGCTTAATGGTGCTGAATCTGTTTGGGCAAGCTTTTGCCTTGTTTGATGCTGATGAATCTATTTTGATCATATGCAGGGACTTGTCTTACAACAACTTGAGCGGTCCACTTCCACCGAACATTGGATCCTTGAGTAACCTTGAAAGCCTGTAAGCACAAAATTAAATGTTTATGTTAGCTCATTGTTGGTTGATTAATTCATAACAAAGTCTGAAGCTGGATTATTCAAAAGTCATAAACTGATCATTTGATTAGAACAAAGATTCCATATCATGATTTTAATATAATATCAATTTTAATTTCATTAATGAATCGCTTCTCTCACTTTCTCTTGTGCATGACAGGAGCGTTGTTGGCTGCCAATTTTCTGGTGACATACCAAAAGAACTCAGCCAACTCCCAAAGCTGCGGTTCCTGTAAAGATCTCAATGACTTGGAAAATATTGTTAATGATCTCATATACCTGCGTCATTTTTTTTATGTTAATAAGAAGTTGTGACGGTAAAAAGTTGTGACGGTAAATGAAGACAGTAGTTTAGACTTAGTTGAAATTTCAATTTGAAAACCCTTCTTTTTTCACATTGACTTATTTGTTAGCTCGAAACCATTTCCATTTCATTCCAGGTAAAACAGAAAATAGTTTTTATCTGTTTTGGGGGATATAACAAACAAAAGGAAATGCTAACTGAGTATCAACTTTGTATTATTTCTTATAGTATCATGGTATAAGAGTTGATGGATTGTATTGCTGCAGGTCCTTGAACAACAACAGGTTTACTGGAAGTATACCTCCATCAATTGGCAACCTTTCAAATATGTACTGGCTTGACTTGGGTGAAAATCGTCTGACTGGATCACTTCCAGTATCTGATGGAACCAATACTGGATTGGACAATTTGACAAACGCTCTGCATTTGTGAGTACCTTTCTTAAAATATCTACCAGGCTTTCAGTTCACTCGCTTCCATTCTAAGGAAAATGTTCGGACTGCTCTTTATTCAGTCATTTTGGGGTCAACCAGCTATCAGGCACCATACCAAGCCAGCTATTCAAATCAAATATGAAGCTCATACATCTGTAAGGCAAAGATAACCTTAGATAATATTTGCAAACTGTTTCATTACTTTTAATCTGTTATGTCATGCTCAAGATTACCCATTGTTCTTGTCATTCAGGTTGCTTGATAACAACAATTTCACTGGCGGCATTCCTCCCACATTGACCCTTTTAACTAAACTTGAAGTCCTGTAAGTGCATACTTTTTCTGAGCAGGCTTATAACCAGCTTTCTTCTAACTGAGTGACCATTCAGTATATAATCCATACAACTCAATATGCACAGGCGTCTCGACAGAAATTACCAACTGACTGGACCTGTTCCTGCCAGCATCAATAGCCTCACAAAACTACAAGAATTGTAATTTTCTGGTTACTCTGAATCTCTGATCAGTATTTGAATGTGCTAGCCTTCAATTCTAACAAATAACCAACCTTATTCTTTGTCAGGCATCTAGAAAACAATAAATTGACAGGCCCTCTGCCAGACTTGACAGGAATGGATTCACTATATGTTGTGTAAGTGCCGAACACACTGTGGTACACTCTACTGAAATTTTATCATAGGAAACCCTTGTATCTGGCATATTGAACTTTTGGTTCATTTGGCCAGTAAGTACAACTAATCTGACAACACATTTGCAGCTCCATGGGCAACAACAACTTCAGTTCATCCAATGTTCCAACCTGGTTCACAGCTTTGTCAGCCTTGACTTCACTGTAATTCTTCTCTGCACACTTTTTGTAGAACACAAGGATGCAATTTTTTTTACACTCGCTTTCAAATCTCGGTAAATGCACAGGAACCTTGAGAACCTACACATCACTGGGGAGCTTCCGCAGCCTCTTTTCAAACTCCCGGCTATCCAGACACTGTGAGTGGAATTAGTGTTATCTTTGCTCATAATATGTGGTTACAAGAACTATGCACTCAATGAACAAAAAAAAAAGAGTAAAGGAAATTGAACATGTCAGTGCTAACTAGCAAGGTAAACTGGTGGTGGCAGGGGTCTTAAGGGCAATAATTTCAACGGCACACTAACCATCGGATCAGACTACAGCAGCACGCTCTCACTGATTGATTTGCAGGACAACCAGATCACCACTCTCGCCGTGAGCGGGGCTCAGTACAACAAGAAACTCATGTAAGATCCATCAAATATACCAAGAGAAATTTTACGGTCCTTTAAAAAGAACTTCGAGGTACCTAAATTTACACTAAAGATTTTGGAACCTCGAGTTACCTAGTACCTGGAGGTATCAAGTTTTACACCAGAAAATGTGATACCTCCTGGTACCTTCTCAAGGATGATAAAATTACCCAATATACCAATTCTTCAGTATGTAGGCGCTCTTATATATGCTTTCATTCACACTCCCATGTTTCTCTTCTCATCACAGACTTGTTGGGAACCCAATCTGTGTTCAGGGGAACAATGAGGCACTGTACTGCAAAAGCTCACAGCAAGCGAACCCTGCAGCAAAGCCTTACTCTACTCAATCCATTTGTCCTGGATTACCACCCACATGCCTGTCGGACCAGTATCTCAGCCCCAACTGCACCTGCGCGGTGCCATACATGGGTACTCTGCACTTCCGGTCACCACCGTTCTTCGACCTAAGCAACGATACATTCTTTGTACTCCTCGAGGAAAACATGAAAGAAGCGTTCCTGGGCAAGCAGCTTCCTGTTGAGTCCATTGCTCTGGATAACCCGGCATTCGGTCCTAGCAACAACTTGGATATAAACTTGAGAGTGTTCCCAAGCGGAAAGATTCGGTTCGGCAAAGAAGATATCTCCTACATTGGGTTCATGCTCAACAACCAGACCTACAAGCCTCATGCTCCTGGTATAAATTATGGGCCATACTATTTCATTGGGCAATCCTACCCATTCGCTGAGAGTAAGTCAACTGTTCGAAAATCTCAACTACTGTAGAATTAATCCACTACCGAATTCCTTTTTTTTTTTTGTTGAAGAATTGGCACTACTGATTTCTAGACTTCTTCATGATTACACAGCACTATCAGCACCCAGACAGACGAAAAAGAACCAGTCCCTCATCATTGGTGTGTCAGCTGGTGGAGCTTTTGTTGTTGTGTCACTGCTTGTTCTTTTTACAGTTCTGTTTTTCAGGAGGAACAAAAGGCCAAAGCTGCAGCCACAACCCAGGAGCCCATCTTACGGTAAGAAGCATTGGATAAAAAAAAAATCATGTTTTTTGTCCATTTGAGTTGACCAACACATGAGCTGGCAAATAAAATTACTTAAATGGCTGTAGCTTCATGGGACATCAAGAGCACCAGCATCAGCACCCCGCATCTCCAAGGCGCGCGGGTGTTCACATTCGATGAGCTGAAGAAAATCACAAACAGCTTCTCCGATGCTAATGACATTGGAACTGGTGGCTATGGGAAGGTAATATATAGTATATTTGTTGAAACGGGTATGTGACTATCTTTAGTGCCTGACATCCAAAGCGATAATGCTGATCAATTGCAGGTCTACAGAGGAGTACTCCCAAATGGGCATCTAATTGCAGTCAAAAGATCCGAGCAAGGGTCCTTGCAAGGCAACCTAGAATTCCGGACTGAGATAGAGCTCCTATCCAGGGTTCATCACAAGAACCTTGTCAGCCTTGTGGGATTTTGCTTTGACCAGGGTGAGCAAATGCTGGTCTATGAGTATGTGCCCAATGGCACACTCAAGGACAGCCTCACAGGTGTGTCCATATGTTCAGTTATGCATGACTGAATCTGCAATTCTCCTTTGTGAAAATAAACATATTCTGCTCACATCTTTTTCAGGGAAGTCTGGGGTGCGCCTAGATTGGAAGAGACGGCTGCGAGTAGTACTTGGTGCAGCGAAAGGCATCGCGTACCTGCATGAGCTTGCAGACCCTCCGATAGTACACAGGGATATAAAGTCAAGTAACATTCTTCTTGATGGAAACCTCCACACAAAGGTTTCCGACTTTGGTCTCTCCAAGCCTCTGAACCAGGATGGAAGGGGTCAGGTCACAACTCAAGTGAAAGGAACCATGGTGAGTTTCACAGCTCTCTTAACTGCAATACTGCAACGATTAAGCACATTGGATACTGTTTCCTGGTTATTTTTCATCAACTCTGTAAGATGAGTATACAGAGCTGTTTAAAGATTATAAAATACTTGTCATGTAGGGATATTTGGACCCTGAATACTACATGACCCAGCAGTTGACCGAGAAGAGCGATGTCTACAGCTTCGGTGTGCTACTACTTGAAGTGATAACGGCGAGAAAGCCATTAGAGAGGGGAAGGTACATCGTGCGTGAGGTGAAAGGTGCAATGGATAGGACCAAGGACCTATACGGCCTCCATGAGCTCCTAGACCCAATGCTAGCACCCACGTCGCTGGCCGGCTTCGAACTGTATGTCGACTTGGCTTTGAAGTGCGTGGAGGAGGCAGGAATGGACCGCCCATCAATGAGTGAGGTGGTGGCGGAGATTGAGAAGATCATGAAGATGGCAGGCGTAAACCCAAAGGTCGACTCGGCATCAAACTCGATGAGCTACAACAGCAGGACACCGCGTCATCCATACAGTGGAGAGTCTCAATTTGATTACAGTGGTGGCATCCCATCTTCGTCCAGGGTTGAACCAAAATGATCAGTTCGGTCGGCCCACAATGATCTCCATGTAAATAACTTGGCGCTTGTTTGTTTGTGTACAGTTCATCAAGGTTCTGAACTGCTTCGTACAGTGACTTTCTTCTGGAATTTCTGTATGATTAATTAGCTAACAATCTGGGTGTGTAAGTTGTTGTGCTAGAAATCTCCTGTTGGTAATGCCTTTTATATACGACACTTTTTTAGTGTTATCTGTC
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| CDS seq | ATGGGGCATTCTCCAACTTCTTGGAGGATCATCCATCTGTTAGTCTTCCTGATCATTGTTCTTGACCACGCTCTCATAATCTCAGCAGATACAGATCCACAAGATACCTCTGCCCTAAATGGCATAGCAGCTTCCTGGGATAACGCCAAGTCCAAGCTATCAGAATGGGTTGGTAATGATCCATGCGGCGAAAAATGGCCAGGAGTGTACTGCACCCAGAATCGTGTCACCTCAATAAGGCTGTCAAGTTTTGGATTGTCCGGATCACTTTCAGGTGACATACAGTCATTGTCAGAATTACAGTACCTGGACTTGTCTTACAACAACTTGAGCGGTCCACTTCCACCGAACATTGGATCCTTGAGTAACCTTGAAAGCCTGAGCGTTGTTGGCTGCCAATTTTCTGGTGACATACCAAAAGAACTCAGCCAACTCCCAAAGCTGCGGTTCCTGTCCTTGAACAACAACAGGTTTACTGGAAGTATACCTCCATCAATTGGCAACCTTTCAAATATGTACTGGCTTGACTTGGGTGAAAATCGTCTGACTGGATCACTTCCAGTATCTGATGGAACCAATACTGGATTGGACAATTTGACAAACGCTCTGCATTTTCATTTTGGGGTCAACCAGCTATCAGGCACCATACCAAGCCAGCTATTCAAATCAAATATGAAGCTCATACATCTGTTGCTTGATAACAACAATTTCACTGGCGGCATTCCTCCCACATTGACCCTTTTAACTAAACTTGAAGTCCTGCGTCTCGACAGAAATTACCAACTGACTGGACCTGTTCCTGCCAGCATCAATAGCCTCACAAAACTACAAGAATTGCATCTAGAAAACAATAAATTGACAGGCCCTCTGCCAGACTTGACAGGAATGGATTCACTATATGTTGTCTCCATGGGCAACAACAACTTCAGTTCATCCAATGTTCCAACCTGGTTCACAGCTTTGTCAGCCTTGACTTCACTGAACCTTGAGAACCTACACATCACTGGGGAGCTTCCGCAGCCTCTTTTCAAACTCCCGGCTATCCAGACACTGGGTCTTAAGGGCAATAATTTCAACGGCACACTAACCATCGGATCAGACTACAGCAGCACGCTCTCACTGATTGATTTGCAGGACAACCAGATCACCACTCTCGCCGTGAGCGGGGCTCAGTACAACAAGAAACTCATACTTGTTGGGAACCCAATCTGTGTTCAGGGGAACAATGAGGCACTGTACTGCAAAAGCTCACAGCAAGCGAACCCTGCAGCAAAGCCTTACTCTACTCAATCCATTTGTCCTGGATTACCACCCACATGCCTGTCGGACCAGTATCTCAGCCCCAACTGCACCTGCGCGGTGCCATACATGGGTACTCTGCACTTCCGGTCACCACCGTTCTTCGACCTAAGCAACGATACATTCTTTGTACTCCTCGAGGAAAACATGAAAGAAGCGTTCCTGGGCAAGCAGCTTCCTGTTGAGTCCATTGCTCTGGATAACCCGGCATTCGGTCCTAGCAACAACTTGGATATAAACTTGAGAGTGTTCCCAAGCGGAAAGATTCGGTTCGGCAAAGAAGATATCTCCTACATTGGGTTCATGCTCAACAACCAGACCTACAAGCCTCATGCTCCTGGTATAAATTATGGGCCATACTATTTCATTGGGCAATCCTACCCATTCGCTGAGACACTATCAGCACCCAGACAGACGAAAAAGAACCAGTCCCTCATCATTGGTGTGTCAGCTGGTGGAGCTTTTGTTGTTGTGTCACTGCTTGTTCTTTTTACAGTTCTGTTTTTCAGGAGGAACAAAAGGCCAAAGCTGCAGCCACAACCCAGGAGCCCATCTTACGCTTCATGGGACATCAAGAGCACCAGCATCAGCACCCCGCATCTCCAAGGCGCGCGGGTGTTCACATTCGATGAGCTGAAGAAAATCACAAACAGCTTCTCCGATGCTAATGACATTGGAACTGGTGGCTATGGGAAGGTCTACAGAGGAGTACTCCCAAATGGGCATCTAATTGCAGTCAAAAGATCCGAGCAAGGGTCCTTGCAAGGCAACCTAGAATTCCGGACTGAGATAGAGCTCCTATCCAGGGTTCATCACAAGAACCTTGTCAGCCTTGTGGGATTTTGCTTTGACCAGGGTGAGCAAATGCTGGTCTATGAGTATGTGCCCAATGGCACACTCAAGGACAGCCTCACAGGGAAGTCTGGGGTGCGCCTAGATTGGAAGAGACGGCTGCGAGTAGTACTTGGTGCAGCGAAAGGCATCGCGTACCTGCATGAGCTTGCAGACCCTCCGATAGTACACAGGGATATAAAGTCAAGTAACATTCTTCTTGATGGAAACCTCCACACAAAGGTTTCCGACTTTGGTCTCTCCAAGCCTCTGAACCAGGATGGAAGGGGTCAGGTCACAACTCAAGTGAAAGGAACCATGGGATATTTGGACCCTGAATACTACATGACCCAGCAGTTGACCGAGAAGAGCGATGTCTACAGCTTCGGTGTGCTACTACTTGAAGTGATAACGGCGAGAAAGCCATTAGAGAGGGGAAGGTACATCGTGCGTGAGGTGAAAGGTGCAATGGATAGGACCAAGGACCTATACGGCCTCCATGAGCTCCTAGACCCAATGCTAGCACCCACGTCGCTGGCCGGCTTCGAACTGTATGTCGACTTGGCTTTGAAGTGCGTGGAGGAGGCAGGAATGGACCGCCCATCAATGAGTGAGGTGGTGGCGGAGATTGAGAAGATCATGAAGATGGCAGGCGTAAACCCAAAGGTCGACTCGGCATCAAACTCGATGAGCTACAACAGCAGGACACCGCGTCATCCATACAGTGGAGAGTCTCAATTTGATTACAGTGGTGGCATCCCATCTTCGTCCAGGGTTGAACCAAAATGA
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| Protein seq | MGHSPTSWRIIHLLVFLIIVLDHALIISADTDPQDTSALNGIAASWDNAKSKLSEWVGNDPCGEKWPGVYCTQNRVTSIRLSSFGLSGSLSGDIQSLSELQYLDLSYNNLSGPLPPNIGSLSNLESLSVVGCQFSGDIPKELSQLPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDLGENRLTGSLPVSDGTNTGLDNLTNALHFHFGVNQLSGTIPSQLFKSNMKLIHLLLDNNNFTGGIPPTLTLLTKLEVLRLDRNYQLTGPVPASINSLTKLQELHLENNKLTGPLPDLTGMDSLYVVSMGNNNFSSSNVPTWFTALSALTSLNLENLHITGELPQPLFKLPAIQTLGLKGNNFNGTLTIGSDYSSTLSLIDLQDNQITTLAVSGAQYNKKLILVGNPICVQGNNEALYCKSSQQANPAAKPYSTQSICPGLPPTCLSDQYLSPNCTCAVPYMGTLHFRSPPFFDLSNDTFFVLLEENMKEAFLGKQLPVESIALDNPAFGPSNNLDINLRVFPSGKIRFGKEDISYIGFMLNNQTYKPHAPGINYGPYYFIGQSYPFAETLSAPRQTKKNQSLIIGVSAGGAFVVVSLLVLFTVLFFRRNKRPKLQPQPRSPSYASWDIKSTSISTPHLQGARVFTFDELKKITNSFSDANDIGTGGYGKVYRGVLPNGHLIAVKRSEQGSLQGNLEFRTEIELLSRVHHKNLVSLVGFCFDQGEQMLVYEYVPNGTLKDSLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIVHRDIKSSNILLDGNLHTKVSDFGLSKPLNQDGRGQVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLEVITARKPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVEEAGMDRPSMSEVVAEIEKIMKMAGVNPKVDSASNSMSYNSRTPRHPYSGESQFDYSGGIPSSSRVEPK |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g14050 | LOC_Os11g14050.1 | Chr11 | 7796547 | 7802609 | + | MSU_osa1r7 | ||
| CDS seq | ATGGGGCATTCTCCAACTTCTTGGAGGATCATCCATCTGTTAGTCTTCCTGATCATTGTTCTTGACCACGCTCTCATAATCTCAGCAGATACAGATCCACAAGATACCTCTGCCCTAAATGGCATAGCAGCTTCCTGGGATAACGCCAAGTCCAAGCTATCAGAATGGGTTGGTAATGATCCATGCGGCGAAAAATGGCCAGGAGTGTACTGCACCCAGAATCGTGTCACCTCAATAAGGCTGTCAAGTTTTGGATTGTCCGGATCACTTTCAGGTGACATACAGTCATTGTCAGAATTACAGTACCTGGACTTGTCTTACAACAACTTGAGCGGTCCACTTCCACCGAACATTGGATCCTTGAGTAACCTTGAAAGCCTGAGCGTTGTTGGCTGCCAATTTTCTGGTGACATACCAAAAGAACTCAGCCAACTCCCAAAGCTGCGGTTCCTGTCCTTGAACAACAACAGGTTTACTGGAAGTATACCTCCATCAATTGGCAACCTTTCAAATATGTACTGGCTTGACTTGGGTGAAAATCGTCTGACTGGATCACTTCCAGTATCTGATGGAACCAATACTGGATTGGACAATTTGACAAACGCTCTGCATTTTCATTTTGGGGTCAACCAGCTATCAGGCACCATACCAAGCCAGCTATTCAAATCAAATATGAAGCTCATACATCTGTTGCTTGATAACAACAATTTCACTGGCGGCATTCCTCCCACATTGACCCTTTTAACTAAACTTGAAGTCCTGCGTCTCGACAGAAATTACCAACTGACTGGACCTGTTCCTGCCAGCATCAATAGCCTCACAAAACTACAAGAATTGCATCTAGAAAACAATAAATTGACAGGCCCTCTGCCAGACTTGACAGGAATGGATTCACTATATGTTGTCTCCATGGGCAACAACAACTTCAGTTCATCCAATGTTCCAACCTGGTTCACAGCTTTGTCAGCCTTGACTTCACTGAACCTTGAGAACCTACACATCACTGGGGAGCTTCCGCAGCCTCTTTTCAAACTCCCGGCTATCCAGACACTGGGTCTTAAGGGCAATAATTTCAACGGCACACTAACCATCGGATCAGACTACAGCAGCACGCTCTCACTGATTGATTTGCAGGACAACCAGATCACCACTCTCGCCGTGAGCGGGGCTCAGTACAACAAGAAACTCATACTTGTTGGGAACCCAATCTGTGTTCAGGGGAACAATGAGGCACTGTACTGCAAAAGCTCACAGCAAGCGAACCCTGCAGCAAAGCCTTACTCTACTCAATCCATTTGTCCTGGATTACCACCCACATGCCTGTCGGACCAGTATCTCAGCCCCAACTGCACCTGCGCGGTGCCATACATGGGTACTCTGCACTTCCGGTCACCACCGTTCTTCGACCTAAGCAACGATACATTCTTTGTACTCCTCGAGGAAAACATGAAAGAAGCGTTCCTGGGCAAGCAGCTTCCTGTTGAGTCCATTGCTCTGGATAACCCGGCATTCGGTCCTAGCAACAACTTGGATATAAACTTGAGAGTGTTCCCAAGCGGAAAGATTCGGTTCGGCAAAGAAGATATCTCCTACATTGGGTTCATGCTCAACAACCAGACCTACAAGCCTCATGCTCCTGGTATAAATTATGGGCCATACTATTTCATTGGGCAATCCTACCCATTCGCTGAGACACTATCAGCACCCAGACAGACGAAAAAGAACCAGTCCCTCATCATTGGTGTGTCAGCTGGTGGAGCTTTTGTTGTTGTGTCACTGCTTGTTCTTTTTACAGTTCTGTTTTTCAGGAGGAACAAAAGGCCAAAGCTGCAGCCACAACCCAGGAGCCCATCTTACGCTTCATGGGACATCAAGAGCACCAGCATCAGCACCCCGCATCTCCAAGGCGCGCGGGTGTTCACATTCGATGAGCTGAAGAAAATCACAAACAGCTTCTCCGATGCTAATGACATTGGAACTGGTGGCTATGGGAAGGTCTACAGAGGAGTACTCCCAAATGGGCATCTAATTGCAGTCAAAAGATCCGAGCAAGGGTCCTTGCAAGGCAACCTAGAATTCCGGACTGAGATAGAGCTCCTATCCAGGGTTCATCACAAGAACCTTGTCAGCCTTGTGGGATTTTGCTTTGACCAGGGTGAGCAAATGCTGGTCTATGAGTATGTGCCCAATGGCACACTCAAGGACAGCCTCACAGGGAAGTCTGGGGTGCGCCTAGATTGGAAGAGACGGCTGCGAGTAGTACTTGGTGCAGCGAAAGGCATCGCGTACCTGCATGAGCTTGCAGACCCTCCGATAGTACACAGGGATATAAAGTCAAGTAACATTCTTCTTGATGGAAACCTCCACACAAAGGTTTCCGACTTTGGTCTCTCCAAGCCTCTGAACCAGGATGGAAGGGGTCAGGTCACAACTCAAGTGAAAGGAACCATGGGATATTTGGACCCTGAATACTACATGACCCAGCAGTTGACCGAGAAGAGCGATGTCTACAGCTTCGGTGTGCTACTACTTGAAGTGATAACGGCGAGAAAGCCATTAGAGAGGGGAAGGTACATCGTGCGTGAGGTGAAAGGTGCAATGGATAGGACCAAGGACCTATACGGCCTCCATGAGCTCCTAGACCCAATGCTAGCACCCACGTCGCTGGCCGGCTTCGAACTGTATGTCGACTTGGCTTTGAAGTGCGTGGAGGAGGCAGGAATGGACCGCCCATCAATGAGTGAGGTGGTGGCGGAGATTGAGAAGATCATGAAGATGGCAGGCGTAAACCCAAAGGTCGACTCGGCATCAAACTCGATGAGCTACAACAGCAGGACACCGCGTCATCCATACAGTGGAGAGTCTCAATTTGATTACAGTGGTGGCATCCCATCTTCGTCCAGGGTTGAACCAAAATGA
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| Protein seq | MGHSPTSWRIIHLLVFLIIVLDHALIISADTDPQDTSALNGIAASWDNAKSKLSEWVGNDPCGEKWPGVYCTQNRVTSIRLSSFGLSGSLSGDIQSLSELQYLDLSYNNLSGPLPPNIGSLSNLESLSVVGCQFSGDIPKELSQLPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDLGENRLTGSLPVSDGTNTGLDNLTNALHFHFGVNQLSGTIPSQLFKSNMKLIHLLLDNNNFTGGIPPTLTLLTKLEVLRLDRNYQLTGPVPASINSLTKLQELHLENNKLTGPLPDLTGMDSLYVVSMGNNNFSSSNVPTWFTALSALTSLNLENLHITGELPQPLFKLPAIQTLGLKGNNFNGTLTIGSDYSSTLSLIDLQDNQITTLAVSGAQYNKKLILVGNPICVQGNNEALYCKSSQQANPAAKPYSTQSICPGLPPTCLSDQYLSPNCTCAVPYMGTLHFRSPPFFDLSNDTFFVLLEENMKEAFLGKQLPVESIALDNPAFGPSNNLDINLRVFPSGKIRFGKEDISYIGFMLNNQTYKPHAPGINYGPYYFIGQSYPFAETLSAPRQTKKNQSLIIGVSAGGAFVVVSLLVLFTVLFFRRNKRPKLQPQPRSPSYASWDIKSTSISTPHLQGARVFTFDELKKITNSFSDANDIGTGGYGKVYRGVLPNGHLIAVKRSEQGSLQGNLEFRTEIELLSRVHHKNLVSLVGFCFDQGEQMLVYEYVPNGTLKDSLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIVHRDIKSSNILLDGNLHTKVSDFGLSKPLNQDGRGQVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLEVITARKPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVEEAGMDRPSMSEVVAEIEKIMKMAGVNPKVDSASNSMSYNSRTPRHPYSGESQFDYSGGIPSSSRVEPK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g14050 | LOC_Os11g14050.2 | Chr11 | 7796547 | 7802609 | + | MSU_osa1r7 | ||
| CDS seq | ATGCGGCGAAAAATGGCCAGGAGTGTACTGCACCCAGAATCGTGTCACCTCAATAAGGCTGTCAAGTTTTGGATTGTCCGGATCACTTTCAGGGACTTGTCTTACAACAACTTGAGCGGTCCACTTCCACCGAACATTGGATCCTTGAGTAACCTTGAAAGCCTGAGCGTTGTTGGCTGCCAATTTTCTGGTGACATACCAAAAGAACTCAGCCAACTCCCAAAGCTGCGGTTCCTGTCCTTGAACAACAACAGGTTTACTGGAAGTATACCTCCATCAATTGGCAACCTTTCAAATATGTACTGGCTTGACTTGGGTGAAAATCGTCTGACTGGATCACTTCCAGTATCTGATGGAACCAATACTGGATTGGACAATTTGACAAACGCTCTGCATTTTCATTTTGGGGTCAACCAGCTATCAGGCACCATACCAAGCCAGCTATTCAAATCAAATATGAAGCTCATACATCTGTTGCTTGATAACAACAATTTCACTGGCGGCATTCCTCCCACATTGACCCTTTTAACTAAACTTGAAGTCCTGCGTCTCGACAGAAATTACCAACTGACTGGACCTGTTCCTGCCAGCATCAATAGCCTCACAAAACTACAAGAATTGCATCTAGAAAACAATAAATTGACAGGCCCTCTGCCAGACTTGACAGGAATGGATTCACTATATGTTGTCTCCATGGGCAACAACAACTTCAGTTCATCCAATGTTCCAACCTGGTTCACAGCTTTGTCAGCCTTGACTTCACTGAACCTTGAGAACCTACACATCACTGGGGAGCTTCCGCAGCCTCTTTTCAAACTCCCGGCTATCCAGACACTGGGTCTTAAGGGCAATAATTTCAACGGCACACTAACCATCGGATCAGACTACAGCAGCACGCTCTCACTGATTGATTTGCAGGACAACCAGATCACCACTCTCGCCGTGAGCGGGGCTCAGTACAACAAGAAACTCATACTTGTTGGGAACCCAATCTGTGTTCAGGGGAACAATGAGGCACTGTACTGCAAAAGCTCACAGCAAGCGAACCCTGCAGCAAAGCCTTACTCTACTCAATCCATTTGTCCTGGATTACCACCCACATGCCTGTCGGACCAGTATCTCAGCCCCAACTGCACCTGCGCGGTGCCATACATGGGTACTCTGCACTTCCGGTCACCACCGTTCTTCGACCTAAGCAACGATACATTCTTTGTACTCCTCGAGGAAAACATGAAAGAAGCGTTCCTGGGCAAGCAGCTTCCTGTTGAGTCCATTGCTCTGGATAACCCGGCATTCGGTCCTAGCAACAACTTGGATATAAACTTGAGAGTGTTCCCAAGCGGAAAGATTCGGTTCGGCAAAGAAGATATCTCCTACATTGGGTTCATGCTCAACAACCAGACCTACAAGCCTCATGCTCCTGGTATAAATTATGGGCCATACTATTTCATTGGGCAATCCTACCCATTCGCTGAGACACTATCAGCACCCAGACAGACGAAAAAGAACCAGTCCCTCATCATTGGTGTGTCAGCTGGTGGAGCTTTTGTTGTTGTGTCACTGCTTGTTCTTTTTACAGTTCTGTTTTTCAGGAGGAACAAAAGGCCAAAGCTGCAGCCACAACCCAGGAGCCCATCTTACGCTTCATGGGACATCAAGAGCACCAGCATCAGCACCCCGCATCTCCAAGGCGCGCGGGTGTTCACATTCGATGAGCTGAAGAAAATCACAAACAGCTTCTCCGATGCTAATGACATTGGAACTGGTGGCTATGGGAAGGTCTACAGAGGAGTACTCCCAAATGGGCATCTAATTGCAGTCAAAAGATCCGAGCAAGGGTCCTTGCAAGGCAACCTAGAATTCCGGACTGAGATAGAGCTCCTATCCAGGGTTCATCACAAGAACCTTGTCAGCCTTGTGGGATTTTGCTTTGACCAGGGTGAGCAAATGCTGGTCTATGAGTATGTGCCCAATGGCACACTCAAGGACAGCCTCACAGGGAAGTCTGGGGTGCGCCTAGATTGGAAGAGACGGCTGCGAGTAGTACTTGGTGCAGCGAAAGGCATCGCGTACCTGCATGAGCTTGCAGACCCTCCGATAGTACACAGGGATATAAAGTCAAGTAACATTCTTCTTGATGGAAACCTCCACACAAAGGTTTCCGACTTTGGTCTCTCCAAGCCTCTGAACCAGGATGGAAGGGGTCAGGTCACAACTCAAGTGAAAGGAACCATGGGATATTTGGACCCTGAATACTACATGACCCAGCAGTTGACCGAGAAGAGCGATGTCTACAGCTTCGGTGTGCTACTACTTGAAGTGATAACGGCGAGAAAGCCATTAGAGAGGGGAAGGTACATCGTGCGTGAGGTGAAAGGTGCAATGGATAGGACCAAGGACCTATACGGCCTCCATGAGCTCCTAGACCCAATGCTAGCACCCACGTCGCTGGCCGGCTTCGAACTGTATGTCGACTTGGCTTTGAAGTGCGTGGAGGAGGCAGGAATGGACCGCCCATCAATGAGTGAGGTGGTGGCGGAGATTGAGAAGATCATGAAGATGGCAGGCGTAAACCCAAAGGTCGACTCGGCATCAAACTCGATGAGCTACAACAGCAGGACACCGCGTCATCCATACAGTGGAGAGTCTCAATTTGATTACAGTGGTGGCATCCCATCTTCGTCCAGGGTTGAACCAAAATGA
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| Protein seq | MRRKMARSVLHPESCHLNKAVKFWIVRITFRDLSYNNLSGPLPPNIGSLSNLESLSVVGCQFSGDIPKELSQLPKLRFLSLNNNRFTGSIPPSIGNLSNMYWLDLGENRLTGSLPVSDGTNTGLDNLTNALHFHFGVNQLSGTIPSQLFKSNMKLIHLLLDNNNFTGGIPPTLTLLTKLEVLRLDRNYQLTGPVPASINSLTKLQELHLENNKLTGPLPDLTGMDSLYVVSMGNNNFSSSNVPTWFTALSALTSLNLENLHITGELPQPLFKLPAIQTLGLKGNNFNGTLTIGSDYSSTLSLIDLQDNQITTLAVSGAQYNKKLILVGNPICVQGNNEALYCKSSQQANPAAKPYSTQSICPGLPPTCLSDQYLSPNCTCAVPYMGTLHFRSPPFFDLSNDTFFVLLEENMKEAFLGKQLPVESIALDNPAFGPSNNLDINLRVFPSGKIRFGKEDISYIGFMLNNQTYKPHAPGINYGPYYFIGQSYPFAETLSAPRQTKKNQSLIIGVSAGGAFVVVSLLVLFTVLFFRRNKRPKLQPQPRSPSYASWDIKSTSISTPHLQGARVFTFDELKKITNSFSDANDIGTGGYGKVYRGVLPNGHLIAVKRSEQGSLQGNLEFRTEIELLSRVHHKNLVSLVGFCFDQGEQMLVYEYVPNGTLKDSLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIVHRDIKSSNILLDGNLHTKVSDFGLSKPLNQDGRGQVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLEVITARKPLERGRYIVREVKGAMDRTKDLYGLHELLDPMLAPTSLAGFELYVDLALKCVEEAGMDRPSMSEVVAEIEKIMKMAGVNPKVDSASNSMSYNSRTPRHPYSGESQFDYSGGIPSSSRVEPK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.139109 | 0.229367 | 0.334446 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0245200 | RBH | 0.112508 | 0.000000 | 0.591653 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g10740 | RBH | 1.701596 | 1.922263 | 0.467923 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0245200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008880 | RBH | 0.000000 | 1.340672 | 1.619075 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008770 | RBH | 0.000000 | 0.358708 | 0.479379 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008770 | RBH | 0.000000 | 3.494172 | 0.907374 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008620 | RBH | 0.029922 | 0.054208 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008700 | RBH | 1.190575 | 3.314458 | 2.556369 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0118300 | RBH | 0.7686545 | 30.5398405 | 2.095467 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008730 | RBH | 0.009980 | 0.635749 | 0.189119 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0122500 | RBH | 0.860945 | 23.5238335 | 4.2400615 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008790 | RBH | 0.017857 | 0.081060 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008880 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008790 | RBH | 0.480241 | 3.668327 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008650 | RBH | 0.062674 | 0.0 | 0.175730 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008800 | RBH | 0.070012 | 2.714940 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008830 | RBH | 0.063060 | 0.132993 | 0.219405 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008720 | RBH | 0.110739 | 12.105433 | 0.685932 |
