Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_09g0007070 | OGI:09033490 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr09:11234222-11235810 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | actgatatatttaattagtgtacattgttagagacagatagagcttacagtcttgggagaacgtcattggatattcatggatgatgcgactgtagacctcataagcattgaggattgggggaagagcagatgtggcagtggcaacaagtttgatggacagaaaatcagaatcactggaccaattgatgatagaccaacctttcaggtatggtggactgatcggtccactttgcccgccgctgtcaattgaaacggtgaactccctagtcttgttatcctggaagtcggcgaagtgcaggatcaccaagtgatcaccgggaagtctgtctcttctctttgaacgtaaaactagttcattggagttaccaaccggcacaaaggctgtttggagaacacgcaagggcaccataaatgtggtattcagttcgatggctgattgggtagaaatgtttgaataagggtcatttccagttaattcccacgcataccaataacgatcgtactgatcatcaggaaacctgtatttatgaaatcctgaatatgaaaggaaacatgcaattgaaaaacaaattgacgatgaatacttacttcctctggtcgtaaatatttgactagtcctaaaatttgatgtttgtgacaatataaaactttgaccatcaaccatcaaaaaggaaatgagttatgttgaaaaataatacttatataagaagggttctatgctttccaaaaaatagtgtacgtacgaatccaagagcacttccattaattactgtaaaattaatagttagggtataaaaattaaagtctgatcaaactttatccttaatgtaaatatttttcaccacaaggaacaaaaggacaggttgatatagaaaattaggagttagtaaaatcagagaatatacaggttcttctccaatccatttgtacattatattaaggtgcaaattaaatgagctgctccttaattactacgacggccggaaattaggaaatacagtagtagtgctcctaccttattatatcgacgtcagcacctgatctcatgctcttccgttcatagagggagagtgactgattgtcggtcgggtaggccaagctttcaaacggcctcagctccaccgtggacacgaatggtgtaccaccgccggtattcaccaggcacaccggcgccgacatagcccatgcgacgaacaccgcggcgtatgctttaaaacgtagtggatggcggtgtccaagatcacggtgtcccagtggttcaccccaagggtcaggttgaacgtcagggatgcgctgtccaggccatcgtagttgccgtacagaaactccagccgaacattgtacttgtccccttttttggtgggtagcgagtagcagctccgttcaccggtaacggatgttgggaagctcctgagcgtgtagagtgtctggtagcgagggcccttccagtcgtccttgtacacggtggtcacccttctattttcgccggcgtcgacgtacgtgccgtcggggacataggtgattccgccaaccaggctttctgggtagctgtcaccctccagaccgcagtcgatgcttaggaaatccaa
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| CDS seq | atgtcggcgccggtgtgcctggtgaataccggcggtggtacaccattcgtgtccacggtggagctgaggccgtttgaaagcttggcctacccgaccgacaatcagtcactctccctctatgaacggaagagcatgagatcaggtgctgacgtcgatataataaggtttcctgatgatcagtacgatcgttattggtatgcgtgggaattaactggaaatgacccttattcaaacatttctacccaatcagccatcgaactgaataccacatttatggtgcccttgcgtgttctccaaacagcctttgtgccggttggtaactccaatgaactagttttacgttcaaagagaagagacagacttcccggtgatcacttggtgatcctgcacttcgccgacttccaggataacaagactagggagttcaccgtttcaattgacagcggcgggcaaagtggaccgatcagtccaccatacctgaaaggttggtctatcatcaattggtccagtgattctgattttctgtccatcaaacttgttgccactgccacatctgctcttcccccaatcctcaatgcttatgaggtctacagtcgcatcatccatgaatatccaatgacgttctcccaagactgtaagctctatctgtctctaacaatgtacactaattaa
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| Protein seq | MSAPVCLVNTGGGTPFVSTVELRPFESLAYPTDNQSLSLYERKSMRSGADVDIIRFPDDQYDRYWYAWELTGNDPYSNISTQSAIELNTTFMVPLRVLQTAFVPVGNSNELVLRSKRRDRLPGDHLVILHFADFQDNKTREFTVSIDSGGQSGPISPPYLKGWSIINWSSDSDFLSIKLVATATSALPPILNAYEVYSRIIHEYPMTFSQDCKLYLSLTMYTN |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At5g59680 [UniProtKB/Swiss-Prot:Q9FN93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_09g0007070 | OsCMeo_09g0007070.01 | Chr09 | 11234222 | 11235810 | - | NAM | ||
| CDS seq | atgtcggcgccggtgtgcctggtgaataccggcggtggtacaccattcgtgtccacggtggagctgaggccgtttgaaagcttggcctacccgaccgacaatcagtcactctccctctatgaacggaagagcatgagatcaggtgctgacgtcgatataataaggtttcctgatgatcagtacgatcgttattggtatgcgtgggaattaactggaaatgacccttattcaaacatttctacccaatcagccatcgaactgaataccacatttatggtgcccttgcgtgttctccaaacagcctttgtgccggttggtaactccaatgaactagttttacgttcaaagagaagagacagacttcccggtgatcacttggtgatcctgcacttcgccgacttccaggataacaagactagggagttcaccgtttcaattgacagcggcgggcaaagtggaccgatcagtccaccatacctgaaaggttggtctatcatcaattggtccagtgattctgattttctgtccatcaaacttgttgccactgccacatctgctcttcccccaatcctcaatgcttatgaggtctacagtcgcatcatccatgaatatccaatgacgttctcccaagactgtaagctctatctgtctctaacaatgtacactaattaa
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| Protein seq | MSAPVCLVNTGGGTPFVSTVELRPFESLAYPTDNQSLSLYERKSMRSGADVDIIRFPDDQYDRYWYAWELTGNDPYSNISTQSAIELNTTFMVPLRVLQTAFVPVGNSNELVLRSKRRDRLPGDHLVILHFADFQDNKTREFTVSIDSGGQSGPISPPYLKGWSIINWSSDSDFLSIKLVATATSALPPILNAYEVYSRIIHEYPMTFSQDCKLYLSLTMYTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0350900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g18159 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0350900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0006840 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0006840 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0007050 | RBH | 1.275999 | 0.0 | 0.272804 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0006950 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0007010 | SBH | 1.672150 | 0.0 | 1.472044 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0194500 | RBH | 0.4693075 | 0.0022385 | 0.0026715 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0007120 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0172000 | RBH | 0.21765 | 0 | 0.0234925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0006830 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006680 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006750 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G007270 | SBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0007090 | RBH | 0.0 | 0.0 | 0.0 |
