Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_08g0020880 | OGI:08071080 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr08:24789490-24792821 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttatcgaggaaacgatagcatttcctcttccatggattgtctacttgcttctgtggcaactccttcaattgagatgtatagtgctgaaattggatttttactgggtctacttgattccttatttaccttatggaatgggcccttttttgaaaatatgttttccagtgccatctctacttctctcattgaaggtcgatcttctcctttcaatttagtacacagagccgctagtgcagctacttcatggacttctccaccttcctcctccttgacttgaggatctattatgtcaataaggtttccttctgagagcagcataacaaaatgtgaaacaaggctgtctccatcgaacgtatcaacaacaggtttctttcgagtaagcaactccacaagaagaactccaaaactaaaaacatcgctcttgtcagttagtcggccagtataatagtacatgggatctaagtagccaattgttccctgaacggctgtagttatttcagatcgatctattggggtgtactttgaagccccaaaatctgatacctttgccgttaaactatcatcaagaagtatattggaggacttaatatctctatgataaattggcattgaagaagctgagtgtagataggacaaagctctagcaacctcaagtgaaatccttaatcgatcatcccatgagagtgaaattggaccatcgacatgaagatgatgataaagggtcccatgtgaaatgaattcataaaccaacaacgggacttctgtctcaaggcaacaaccttggagcttcacaacgtttctatggttgatttgagaaagtattgcgacttcatttatgaattcaccgatttctctttgaactataatctttgatttttttatggccacaacatttaggtccagaatccccttaaacacgactccatgccctccatctccgacctgacgagatctatcaaaattgtttgtggccttctggagctcctctaaggtaattatcattcgctcaccgaaatctgtgttttttgatattaactgctgcaatagcaatccatgattttgcttaaagaacttctctttcaattttttgtccctgcgttgcttgaccacacgtgctactaagggagtagcaagtaccagaataagaacaattgatccaccagtaactattagagctatctttaaccctgaaaaggaagatccatgaagagacaaatctagtgaattaatttttgagatatgttaaactaagaaagacctaagctataaattttggaatgatgatcaaactaccatagactcgctatagatactgaggtatgtataatcatgcaaagatacgaatacataaatttggtaagatatatgctctttagtgaattgtcacctgttaaatagttcttggatgtgatgcatcccccctttttaaaggcatccccatgtgctccatcttgacatcgacaatgaaatgacccatgcgtatttatgcagagtccatagcacgaatgcgccgctgggtccgcacactcatcaatgtctacacaaataatacaacttactcctgaaggtacacacctaggaaggagatctaaaacaatgttgagaaatcaatggataaattagctagttgtgcggttctctggtagtgtggattatatataaaattttaaaactattaatttcaatttttttgaactattaataaaattaaattgttttgttcttgagtgcttaaaataaatttatatagcttttaactaaaaaatgggacatatgtaattaaattgcttgtgcgaatatatgggggttaccaattagactacacaattagtctaatcaagtacttgttttgttatacatgtcattaagttgaaacactcgtatatttatctacataccttcgcatccttctggccgagtagcgttgccctttaagccatcttggcattgacaattatatcctccttgcgtattactgcaatcgccgaaacatggatatatatcgggagaatcacactcattgatatctagacatgcaaaattgtattggtcaggagaggggaaaatcttctttttagataatgaagaagtaaaagtctaggatggaaaatataattttgactagaactataggtatctttgcaaaacgatcacaaaaccatactttgaagaaaacatacaaggaaatgcacaaaatctatccttgttttaaaaatatccacgtatggtaccacttctggcatcattctagtaggaatttcttttgtacgttggtaattataaatctggtagttcatttgtgtaagagtatgtatgaaaaataaaaccatttgatggttgattgcacatatttttaatatgatcctttatataatcaatggtccatttgaatgcaaagtttaaggacccatgcatgttcataacgtatacatgtaaatacctttgcatccatcaatgatgtatggattgccttgataaccatcagagcactcgcaccgataccccccgtgtgtctcaacatccgtgtcttggcaagagctgtgggcactgcgacactcgggggcagatgaatttctaggacaatttcttgtcgaattactgattacccagtccagcaaggctggcaatgctcgaggaggatactcggtggaattggaaagcataaaatcggtatagttgaatccctggtcgaccatgtaaatatttgaagatttagcatccacttcctggttcaggttgtgaatgtggatgagataggacgagtggcctagaaagatatttgtttgacaacaaccagtgcccgagcaacggctgcccatgatgaacgatgggcagacggaactgcaggaggcgaccaacgtgcggtcccctcccagctctcggacatcgacctgggagtcgcagcccatcaacaataggctgctctccaactccgacaggaagaacggcccgccatctgggaggccaccaccccatgtcccgtttgcgcttccatggccattgtcttcgacattgattcggtcactgttgatgcgcacagttccattagggatggatatgtcgagcacctgtaccgtgccatcgccgaggaatagcctgggtgggtggtaagagtggttgcaggtgaggttgaagccgactgcatggtagcagccggcctccaccccgaacgggtactcgatgctaatgttaccgcatctggtggtgcagctcttgattttcttcgcgggtggcaccgcgggttcatccgccgcagccaccactgcggccagcagctgcagaatcagcaactgaacatgcactctcctgctgctcactaccaccctgaccat
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| CDS seq | atggtcagggtggtagtgagcagcaggagagtgcatgttcagttgctgattctgcagctgctggccgcagtggtggctgcggcggatgaacccgcggtgccacccgcgaagaaaatcaagagctgcaccaccagatgcggtaacattagcatcgagtacccgttcggggtggaggccggctgctaccatgcagtcggcttcaacctcacctgcaaccactcttaccacccacccaggctattcctcggcgatggcacggtacaggtgctcgacatatccatccctaatggaactgtgcgcatcaacagtgaccgaatcaatgtcgaagacaatggccatggaagcgcaaacgggacatggggtggtggcctcccagatggcgggccgttcttcctgtcggagttggagagcagcctattgttgatgggctgcgactcccaggtcgatgtccgagagctgggaggggaccgcacgttggtcgcctcctgcagttccgtctgcccatcgttcatcatgggcagccgttgctcgggcactggttgttgtcaaacaaatatctttctaggccactcgtcctatctcatccacattcacaacctgaaccaggaagtggatgctaaatcttcaaatatttacatggtcgaccagggattcaactataccgattttatgctttccaattccaccgagtatcctcctcgagcattgccagccttgctggactgggtaatcagtaattcgacaagaaattgtcctagaaattcatctgcccccgagtgtcgcagtgcccacagctcttgccaagacacggatgttgagacacacggggggtatcggtgcgagtgctctgatggttatcaaggcaatccatacatcattgatggatgcaaagggttaaagatagctctaatagttactggtggatcaattgttcttattctggtacttgctactcccttagtagcacgtgtggtcaagcaacgcagggacaaaaaattgaaagagaagttctttaagcaaaatcatggattgctattgcagcagttaatatcaaaaaacacagatttcggtgagcgaatgataattaccttagaggagctccagaaggccacaaacaattttgatagatctcgtcaggtcggagatggagggcatggagtcgtgtttaaggggattctggacctaaatgttgtggccataaaaaaatcaaagattatagttcaaagagaaatcggtgaattcataaatgaagtcgcaatactttctcaaatcaaccatagaaacgttgtgaagctccaaggttgttgccttgagacagaagtcccgttgttggtttatgaattcatttcacatgggaccctttatcatcatcttcatgtcgatggtccaatttcactctcatgggatgatcgattaaggatttcacttgaggttgctagagctttgtcctatctacactcagcttcttcaatgccaatttatcatagagatattaagtcctccaatatacttcttgatgatagtttaacggcaaaggtatcagattttggggcttcaaagtacaccccaatagatcgatctgaaataactacagccgttcagggaacaattggctacttagatcccatgtactattatactggccgactaactgacaagagcgatgtttttagttttggagttcttcttgtggagttgcttactcgaaagaaacctgttgttgatacgttcgatggagacagccttgtttcacattttgttatgctgctctcagaaggaaaccttattgacataatagatcctcaagtcaaggaggaggaaggtggagaagtccatgaagtagctgcactagcggctctgtgtactaaattgaaaggagaagatcgaccttcaatgagagaagtagagatggcactggaaaacatattttcaaaaaagggcccattccataaggtaaataaggaatcaagtagacccagtaaaaatccaatttcagcactatacatctcaattgaaggagttgccacagaagcaagtagacaatccatggaagaggaaatgctatcgtttcctcgataa
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| Protein seq | MVRVVVSSRRVHVQLLILQLLAAVVAAADEPAVPPAKKIKSCTTRCGNISIEYPFGVEAGCYHAVGFNLTCNHSYHPPRLFLGDGTVQVLDISIPNGTVRINSDRINVEDNGHGSANGTWGGGLPDGGPFFLSELESSLLLMGCDSQVDVRELGGDRTLVASCSSVCPSFIMGSRCSGTGCCQTNIFLGHSSYLIHIHNLNQEVDAKSSNIYMVDQGFNYTDFMLSNSTEYPPRALPALLDWVISNSTRNCPRNSSAPECRSAHSSCQDTDVETHGGYRCECSDGYQGNPYIIDGCKGLKIALIVTGGSIVLILVLATPLVARVVKQRRDKKLKEKFFKQNHGLLLQQLISKNTDFGERMIITLEELQKATNNFDRSRQVGDGGHGVVFKGILDLNVVAIKKSKIIVQREIGEFINEVAILSQINHRNVVKLQGCCLETEVPLLVYEFISHGTLYHHLHVDGPISLSWDDRLRISLEVARALSYLHSASSMPIYHRDIKSSNILLDDSLTAKVSDFGASKYTPIDRSEITTAVQGTIGYLDPMYYYTGRLTDKSDVFSFGVLLVELLTRKKPVVDTFDGDSLVSHFVMLLSEGNLIDIIDPQVKEEEGGEVHEVAALAALCTKLKGEDRPSMREVEMALENIFSKKGPFHKVNKESSRPSKNPISALYISIEGVATEASRQSMEEEMLSFPR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_08g0020880 | OsCMeo_08g0020880.01 | Chr08 | 24789490 | 24792821 | - | NAM | ||
| CDS seq | atggtcagggtggtagtgagcagcaggagagtgcatgttcagttgctgattctgcagctgctggccgcagtggtggctgcggcggatgaacccgcggtgccacccgcgaagaaaatcaagagctgcaccaccagatgcggtaacattagcatcgagtacccgttcggggtggaggccggctgctaccatgcagtcggcttcaacctcacctgcaaccactcttaccacccacccaggctattcctcggcgatggcacggtacaggtgctcgacatatccatccctaatggaactgtgcgcatcaacagtgaccgaatcaatgtcgaagacaatggccatggaagcgcaaacgggacatggggtggtggcctcccagatggcgggccgttcttcctgtcggagttggagagcagcctattgttgatgggctgcgactcccaggtcgatgtccgagagctgggaggggaccgcacgttggtcgcctcctgcagttccgtctgcccatcgttcatcatgggcagccgttgctcgggcactggttgttgtcaaacaaatatctttctaggccactcgtcctatctcatccacattcacaacctgaaccaggaagtggatgctaaatcttcaaatatttacatggtcgaccagggattcaactataccgattttatgctttccaattccaccgagtatcctcctcgagcattgccagccttgctggactgggtaatcagtaattcgacaagaaattgtcctagaaattcatctgcccccgagtgtcgcagtgcccacagctcttgccaagacacggatgttgagacacacggggggtatcggtgcgagtgctctgatggttatcaaggcaatccatacatcattgatggatgcaaagggttaaagatagctctaatagttactggtggatcaattgttcttattctggtacttgctactcccttagtagcacgtgtggtcaagcaacgcagggacaaaaaattgaaagagaagttctttaagcaaaatcatggattgctattgcagcagttaatatcaaaaaacacagatttcggtgagcgaatgataattaccttagaggagctccagaaggccacaaacaattttgatagatctcgtcaggtcggagatggagggcatggagtcgtgtttaaggggattctggacctaaatgttgtggccataaaaaaatcaaagattatagttcaaagagaaatcggtgaattcataaatgaagtcgcaatactttctcaaatcaaccatagaaacgttgtgaagctccaaggttgttgccttgagacagaagtcccgttgttggtttatgaattcatttcacatgggaccctttatcatcatcttcatgtcgatggtccaatttcactctcatgggatgatcgattaaggatttcacttgaggttgctagagctttgtcctatctacactcagcttcttcaatgccaatttatcatagagatattaagtcctccaatatacttcttgatgatagtttaacggcaaaggtatcagattttggggcttcaaagtacaccccaatagatcgatctgaaataactacagccgttcagggaacaattggctacttagatcccatgtactattatactggccgactaactgacaagagcgatgtttttagttttggagttcttcttgtggagttgcttactcgaaagaaacctgttgttgatacgttcgatggagacagccttgtttcacattttgttatgctgctctcagaaggaaaccttattgacataatagatcctcaagtcaaggaggaggaaggtggagaagtccatgaagtagctgcactagcggctctgtgtactaaattgaaaggagaagatcgaccttcaatgagagaagtagagatggcactggaaaacatattttcaaaaaagggcccattccataaggtaaataaggaatcaagtagacccagtaaaaatccaatttcagcactatacatctcaattgaaggagttgccacagaagcaagtagacaatccatggaagaggaaatgctatcgtttcctcgataa
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| Protein seq | MVRVVVSSRRVHVQLLILQLLAAVVAAADEPAVPPAKKIKSCTTRCGNISIEYPFGVEAGCYHAVGFNLTCNHSYHPPRLFLGDGTVQVLDISIPNGTVRINSDRINVEDNGHGSANGTWGGGLPDGGPFFLSELESSLLLMGCDSQVDVRELGGDRTLVASCSSVCPSFIMGSRCSGTGCCQTNIFLGHSSYLIHIHNLNQEVDAKSSNIYMVDQGFNYTDFMLSNSTEYPPRALPALLDWVISNSTRNCPRNSSAPECRSAHSSCQDTDVETHGGYRCECSDGYQGNPYIIDGCKGLKIALIVTGGSIVLILVLATPLVARVVKQRRDKKLKEKFFKQNHGLLLQQLISKNTDFGERMIITLEELQKATNNFDRSRQVGDGGHGVVFKGILDLNVVAIKKSKIIVQREIGEFINEVAILSQINHRNVVKLQGCCLETEVPLLVYEFISHGTLYHHLHVDGPISLSWDDRLRISLEVARALSYLHSASSMPIYHRDIKSSNILLDDSLTAKVSDFGASKYTPIDRSEITTAVQGTIGYLDPMYYYTGRLTDKSDVFSFGVLLVELLTRKKPVVDTFDGDSLVSHFVMLLSEGNLIDIIDPQVKEEEGGEVHEVAALAALCTKLKGEDRPSMREVEMALENIFSKKGPFHKVNKESSRPSKNPISALYISIEGVATEASRQSMEEEMLSFPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0501088 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39170 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0501088 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021090 | RBH | 0.0 | 0.0 | 0.575890 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0020990 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0014620 | SBH | 0.595556 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021100 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0020970 | SBH | 0.0 | 0.000000 | 1.175692 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0394800 | RBH | 0.069682 | 0.5907 | 0.7766015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0020860 | RBH | 0.0 | 0.000000 | 0.026833 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0414900 | RBH | 0.080256 | 0.345905 | 1.061677 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020210 | SBH | 0.034985 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020470 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020310 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021160 | SBH | 0.0 | 0.056039 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020510 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G013910 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0014060 | SBH | 0.0 | 0.0 | 0.0 |
