Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_08g0020210 | OGI:08071290 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr08:25581437-25585003 | ||||||||
| Gene Symbol | RLCK254, OsRLCK254, WAK74, OsWAK74 | ||||||||||
| DNA seq | aattgccttccattgttatgtttacatgcattgatttatctagaatgtatgaattcaactgagccagacattcgctgctaacgaaaagatttcgggaattgtttatgacgggatagaaacaattcttcatttccaaaacaataaagcaagatcacttcttgcactactgacatgctttacaaacgttgtacatataacaaacagcaattctagttcaggccaaagacaaacatcatcgaggataggtaccagacgacaatatttcctcttccatagtgtattgtctggttgattcgtcagtgattcctctagtcgacaaataatcacatacaatttggtccccatcacatctgtttgatgttgtaccaagtgtagcatgcttcttcttaactcgcatattttcaagtgccatctccacttctctcattgtaggccggtcatctcccttcaatttaatacacgttgctgctagtgcagctacttcttggacttctccatctccctcttccatgacttgaggatctaatatgtcgaccaagttgttttctgtatgtagtgaaacaaaatgtaaaacaagagcatcgccgttgctagaggtgtgtacaaacggcttctttctagtaagcaattccacgagaagaacaccaaaactaaaaacatcactcctgtcagttagccttccagtgtaatagtacattggatctaaatatccaaatgttccctgaacagctgttgtcactcctgtttgatcgattggaatgtaccttgaagctccaaagtctgacacctttgctgtcaagctatcatcaagaagtatattggaagatttaatatctctatggaatattggcatagaactagctgaatgcagatacgcaacagctctagcaacttcaagtgcaatccttagtcggtcatcccacggaactgacattggcccttcaacatgaagatgatcataaagtgttccatttgaaacaaactcataaaccaacaatggaacttctgtctcaaggcagcatcctaggagcttcactacatttctatggttgatttgggaaagaactgcaacctcatttatgaattggtcaatttctcgttgtactactatctttgatttcttgatggccacaacatgtaggtcaagtattcccttgtacacaatgccatgccctcccccaccaacctcacgacttttatcaaaattgtttgtggccttctctagatctgataaggtaatgatcattctttccccaatgtccaccttttgtgaaattaattgctgcaatagcaacccatgattttgcttgaaaaatctttcttttgttttcttcatcttccgtagcttaatcttactgttgcgaggggagcacaaagagccagaagcaaaagaactgtgccgccactgactacaagaccaatgcttaaacctgaaaaactacggagaaaaaatcagtatgagatatcatgcaatgatgcaagagagttatctagaggatagaccgtgcattgaagttgtcaatgttatagtctgtaccataggatcatacgagttatagaaacacgattctataagataattccagtaaagatcctatgcaggatagtaagaaagaacataataaatagtggtagaaaccttgtaaatattaatatcatgctttttcgggtacaaacctgacacaacaaaattagttgcaatgcgcatacggtgaatcacagtctactttagttgatctgttgatgcaacacatcatgattttttaggtacagaactaacacaacaaaattacataacaaatcacatagtctacttttagtttattcaacatatcaccacagtgccgtattatttgttcaaagtgaacaactatgtttttcctttaaaagtaaccactcaagctcacataatcatgtagcttcccacattttagtggtgatcataaacaaatggttactgaaaaagtgcagaacaatctgcttctaaatacaaaggctattatttttatttaaaaaaatagtagtgtgtgctgcgacgtgtaagagcagaatgtgaaacaaataattgaagagctcatgtaaaatgaataaaacagttcttcagagaaacaaacgaaaaacaactggaatgcgcaattatttgcactcaggtaatgaagatagaacagagcaacagacatgtttaattggcagagaattaataaaaactactgaacattcctttcaaaaaaatatcaattactggatacgaactgtcagctatgtagatgccattaccaccagtctcattactaaaaaaaaatctacatatagagttgatggcatgagtacaaggtaattagggagtgattgtcaccttgagaggaattctttatcttgatgcatcccccttccatcaagggattgccgtaagtcccatcaggacagcggcaatgaaatgttccgggcatatttacgcaggtaccatagcatgagtggagtttccagtgtgaacattcgtcaatgtctaaccaaataatgaagaagcatgtaattagactgggaaaatagccacatagatgtatacttatcgaagcaccgagctgttttcaactgatttccattttaactttgtatgacttaaagaaaataaaagcaagttgaattgacttgtttaccttggcatccgtttggaatgtaagggttgccttgataaccagcattgcagcgacactgatagccattgtagacatagcttgtatagttttgacaatagctgttactgctgcggcatgcaggtgcaggtgctgcagatggcttcgtaccacatgtcgaattgctaatagcccagtccagcaaagctgggagtgcactgacagtttcaaagataaggcgtgtggcattataggacccctcctcagctatgtacacaaaggactctgcatcaaactctgaaatttcattggcaggttggatctggatgctataggatgtgtagcctttggggatggccgcactgcagcagccaataccagaacactcgttgcgcattgggaactgaaaaggttggcctttcttgggggctggagggcagtaagtagcacaggcattgacagtggaattatcgcctccaagaagaagaacttgaacattgctgcatgatagaaccaggaacttgttcttgtacggcgagatgaagaacgggccgccctttctcagtccaccccatgtgtggtatttccctgtcttgttgacactgccagttccaacagcacttgatgttgatactggaacgatactgctgctgttgatgcgcaccgtgccactaggaatcgagatctcgagcacttcaacggagccatcaccaaggaacagcttgggcggcttgtgcgagcgatcgcaggtgaggttgaagccctcgtggtagcagccaggctctactccaaatggataggagattccgatgttgccacagtgggtgctgcaattagctgctgccgccgttgctacacccaacagcagctgtagcagcagaactgcaagtacagatagcgaaaacacaactctcatacttgcgaacctctccat
More
|
||||||||||
| CDS seq | atggagaggttcgcaagtatgagagttgtgttttcgctatctgtacttgcagttctgctgctacagctgctgttgggtgtagcaacggcggcagcagctaattgcagcacccactgtggcaacatcggaatctcctatccatttggagtagagcctggctgctaccacgagggcttcaacctcacctgcgatcgctcgcacaagccgcccaagctgttccttggtgatggctccgttgaagtgctcgagatctcgattcctagtggcacggtgcgcatcaacagcagcagtatcgttccagtatcaacatcaagtgctgttggaactggcagtgtcaacaagacagggaaataccacacatggggtggactgagaaagggcggcccgttcttcatctcgccgtacaagaacaagttcctggttctatcatgcagcaatgttcaagttcttcttcttggaggcgataattccactgtcaatgcctgtgctacttactgccctccagcccccaagaaaggccaaccttttcagttcccaatgcgcaacgagtgttctggtattggctgctgcagtgcggccatccccaaaggctacacatcctatagcatccagatccaacctgccaatgaaatttcagagtttgatgcagagtcctttgtgtacatagctgaggaggggtcctataatgccacacgccttatctttgaaactgtcagtgcactcccagctttgctggactgggctattagcaattcgacatgtggtacgaagccatctgcagcacctgcacctgcatgccgcagcagtaacagctattgtcaaaactatacaagctatgtctacaatggctatcagtgtcgctgcaatgctggttatcaaggcaacccttacattccaaacggatgccaagactataacattgacaacttcaatgcacggtttaagcattggtcttgtagtcagtggcggcacagttcttttgcttctggctctttgtgctcccctcgcaacagtaagattaagctacggaagatgaagaaaacaaaagaaagatttttcaagcaaaatcatgggttgctattgcagcaattaatttcacaaaaggtggacattggggaaagaatgatcattaccttatcagatctagagaaggccacaaacaattttgataaaagtcgtgaggttggtgggggagggcatggcattgtgtacaagggaatacttgacctacatgttgtggccatcaagaaatcaaagatagtagtacaacgagaaattgaccaattcataaatgaggttgcagttctttcccaaatcaaccatagaaatgtagtgaagctcctaggatgctgccttgagacagaagttccattgttggtttatgagtttgtttcaaatggaacactttatgatcatcttcatgttgaagggccaatgtcagttccgtgggatgaccgactaaggattgcacttgaagttgctagagctgttgcgtatctgcattcagctagttctatgccaatattccatagagatattaaatcttccaatatacttcttgatgatagcttgacagcaaaggtgtcagactttggagcttcaaggtacattccaatcgatcaaacaggagtgacaacagctgttcagggaacatttggatatttagatccaatgtactattacactggaaggctaactgacaggagtgatgtttttagttttggtgttcttctcgtggaattgcttactagaaagaagccgtttgtacacacctctagcaacggcgatgctcttgttttacattttgtttcactacatacagaaaacaacttggtcgacatattagatcctcaagtcatggaagagggagatggagaagtccaagaagtagctgcactagcagcaacgtgtattaaattgaagggagatgaccggcctacaatgagagaagtggagatggcacttgaaaatatgcgagttaagaagaagcatgctacacttggtacaacatcaaacagatgtgatggggaccaaattgtatgtgattatttgtcgactagaggaatcactgacgaatcaaccagacaatacactatggaagaggaaatattgtcgtctggtacctatcctcgatga
More
|
||||||||||
| Protein seq | MERFASMRVVFSLSVLAVLLLQLLLGVATAAAANCSTHCGNIGISYPFGVEPGCYHEGFNLTCDRSHKPPKLFLGDGSVEVLEISIPSGTVRINSSSIVPVSTSSAVGTGSVNKTGKYHTWGGLRKGGPFFISPYKNKFLVLSCSNVQVLLLGGDNSTVNACATYCPPAPKKGQPFQFPMRNECSGIGCCSAAIPKGYTSYSIQIQPANEISEFDAESFVYIAEEGSYNATRLIFETVSALPALLDWAISNSTCGTKPSAAPAPACRSSNSYCQNYTSYVYNGYQCRCNAGYQGNPYIPNGCQDYNIDNFNARFKHWSCSQWRHSSFASGSLCSPRNSKIKLRKMKKTKERFFKQNHGLLLQQLISQKVDIGERMIITLSDLEKATNNFDKSREVGGGGHGIVYKGILDLHVVAIKKSKIVVQREIDQFINEVAVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLYDHLHVEGPMSVPWDDRLRIALEVARAVAYLHSASSMPIFHRDIKSSNILLDDSLTAKVSDFGASRYIPIDQTGVTTAVQGTFGYLDPMYYYTGRLTDRSDVFSFGVLLVELLTRKKPFVHTSSNGDALVLHFVSLHTENNLVDILDPQVMEEGDGEVQEVAALAATCIKLKGDDRPTMREVEMALENMRVKKKHATLGTTSNRCDGDQIVCDYLSTRGITDESTRQYTMEEEILSSGTYPR |
||||||||||
| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_08g0020210 | OsLima_08g0020210.01 | Chr08 | 25581437 | 25585003 | - | NAM | ||
| CDS seq | atggagaggttcgcaagtatgagagttgtgttttcgctatctgtacttgcagttctgctgctacagctgctgttgggtgtagcaacggcggcagcagctaattgcagcacccactgtggcaacatcggaatctcctatccatttggagtagagcctggctgctaccacgagggcttcaacctcacctgcgatcgctcgcacaagccgcccaagctgttccttggtgatggctccgttgaagtgctcgagatctcgattcctagtggcacggtgcgcatcaacagcagcagtatcgttccagtatcaacatcaagtgctgttggaactggcagtgtcaacaagacagggaaataccacacatggggtggactgagaaagggcggcccgttcttcatctcgccgtacaagaacaagttcctggttctatcatgcagcaatgttcaagttcttcttcttggaggcgataattccactgtcaatgcctgtgctacttactgccctccagcccccaagaaaggccaaccttttcagttcccaatgcgcaacgagtgttctggtattggctgctgcagtgcggccatccccaaaggctacacatcctatagcatccagatccaacctgccaatgaaatttcagagtttgatgcagagtcctttgtgtacatagctgaggaggggtcctataatgccacacgccttatctttgaaactgtcagtgcactcccagctttgctggactgggctattagcaattcgacatgtggtacgaagccatctgcagcacctgcacctgcatgccgcagcagtaacagctattgtcaaaactatacaagctatgtctacaatggctatcagtgtcgctgcaatgctggttatcaaggcaacccttacattccaaacggatgccaagactataacattgacaacttcaatgcacggtttaagcattggtcttgtagtcagtggcggcacagttcttttgcttctggctctttgtgctcccctcgcaacagtaagattaagctacggaagatgaagaaaacaaaagaaagatttttcaagcaaaatcatgggttgctattgcagcaattaatttcacaaaaggtggacattggggaaagaatgatcattaccttatcagatctagagaaggccacaaacaattttgataaaagtcgtgaggttggtgggggagggcatggcattgtgtacaagggaatacttgacctacatgttgtggccatcaagaaatcaaagatagtagtacaacgagaaattgaccaattcataaatgaggttgcagttctttcccaaatcaaccatagaaatgtagtgaagctcctaggatgctgccttgagacagaagttccattgttggtttatgagtttgtttcaaatggaacactttatgatcatcttcatgttgaagggccaatgtcagttccgtgggatgaccgactaaggattgcacttgaagttgctagagctgttgcgtatctgcattcagctagttctatgccaatattccatagagatattaaatcttccaatatacttcttgatgatagcttgacagcaaaggtgtcagactttggagcttcaaggtacattccaatcgatcaaacaggagtgacaacagctgttcagggaacatttggatatttagatccaatgtactattacactggaaggctaactgacaggagtgatgtttttagttttggtgttcttctcgtggaattgcttactagaaagaagccgtttgtacacacctctagcaacggcgatgctcttgttttacattttgtttcactacatacagaaaacaacttggtcgacatattagatcctcaagtcatggaagagggagatggagaagtccaagaagtagctgcactagcagcaacgtgtattaaattgaagggagatgaccggcctacaatgagagaagtggagatggcacttgaaaatatgcgagttaagaagaagcatgctacacttggtacaacatcaaacagatgtgatggggaccaaattgtatgtgattatttgtcgactagaggaatcactgacgaatcaaccagacaatacactatggaagaggaaatattgtcgtctggtacctatcctcgatga
More
|
|||||||
| Protein seq | MERFASMRVVFSLSVLAVLLLQLLLGVATAAAANCSTHCGNIGISYPFGVEPGCYHEGFNLTCDRSHKPPKLFLGDGSVEVLEISIPSGTVRINSSSIVPVSTSSAVGTGSVNKTGKYHTWGGLRKGGPFFISPYKNKFLVLSCSNVQVLLLGGDNSTVNACATYCPPAPKKGQPFQFPMRNECSGIGCCSAAIPKGYTSYSIQIQPANEISEFDAESFVYIAEEGSYNATRLIFETVSALPALLDWAISNSTCGTKPSAAPAPACRSSNSYCQNYTSYVYNGYQCRCNAGYQGNPYIPNGCQDYNIDNFNARFKHWSCSQWRHSSFASGSLCSPRNSKIKLRKMKKTKERFFKQNHGLLLQQLISQKVDIGERMIITLSDLEKATNNFDKSREVGGGGHGIVYKGILDLHVVAIKKSKIVVQREIDQFINEVAVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLYDHLHVEGPMSVPWDDRLRIALEVARAVAYLHSASSMPIFHRDIKSSNILLDDSLTAKVSDFGASRYIPIDQTGVTTAVQGTFGYLDPMYYYTGRLTDRSDVFSFGVLLVELLTRKKPFVHTSSNGDALVLHFVSLHTENNLVDILDPQVMEEGDGEVQEVAALAATCIKLKGDDRPTMREVEMALENMRVKKKHATLGTTSNRCDGDQIVCDYLSTRGITDESTRQYTMEEEILSSGTYPR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.034985 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0501500 | RBH | 0.248283 | 0.203598 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39210 | RBH | 0.106655 | 0.143365 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0501500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021120 | RBH | 0.081640 | 0.000000 | 0.946681 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021020 | RBH | 0.0 | 1.386426 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0020910 | RBH | 0.000000 | 0.000000 | 0.569058 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021130 | RBH | 0.030463 | 0.025121 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0020990 | RBH | 0.000000 | 1.458236 | 0.475933 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0395200 | RBH | 0.395437 | 1.889284 | 1.259837 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0020880 | RBH | 0.0 | 0.0 | 0.107319 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0415200 | RBH | 0.6111765 | 1.6682125 | 5.9258165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014400 | RBH | 0.191254 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020490 | RBH | 0.079547 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020330 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021180 | RBH | 0.077840 | 0.302441 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020540 | RBH | 0.000000 | 0.888510 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G020690 | RBH | 0.0 | 1.138547 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0020860 | RBH | 0.140890 | 1.199712 | 0.238214 |
