Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_07g0026650 | OGI:07067180 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr07:27525662-27555725 | ||||||||
| Gene Symbol | OsSDR110C-MI2, SDR110C-MI2, OsSDR110C-MI3, SDR110C-MI3, SDR7-6, OsSDR7-6, TS2, RMP8 | ||||||||||
| DNA seq | gattagctcaaagtccacagcgagagatgctcagtttcagagcataaatacactctagaatgctgaattgaccattatcggatcaggaggaccttatgatgcagagaacaatgcagctcgttctcaggtttgatcaccttattagagcagagttcatgtctgttcttgattgctcactaagctgtaaagatgatttggttttctgtttgcgttagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttaatttctttcatgattttctgatcattttgtgttcatgtgtgtggatcatggtgatcgattcgatgcaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagtagacagtgatcaagagcagtgcaacaagacaagaaaaattgcaggatgcaaaaaaaaaaaaaagaacgaataaggaagagagtctactttgtaccgtgaaatatagactccccaaatttacttttcgctcccaaataaggctgtgttctattggaacttcgcaagtaaaacgaagcgacgaattaacgtatgattaattaagtattagcttaaaagatttttttctttaaaaaaaatgtaccatttaatagtttgagaagcatgtctgtgtaaatgagcgaggtaaggttgggatcctcgagggaagaacacagcctaaggctaagctacaagtccacatattttttttcgaataaggacaagcccacatatttaacatctactccctctgtttcacaatgtaagtcattttagcatttctcatattcatattgatgttaaatactccctccttccctaaatgtttgacgccgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatgtgtaaaactatatgtatacgtaaaagtatacttaacaataaatcaaatgataggaaaagaattaataattacttaaattttttgaataagacaaacggtcaaatatttttttaaaagtcaacggcgtcaaatattttatgatggaaggaatatatgtctagatttattaacatcaatataaatgtgagaaatgctagaatgacataaaatgaataacaataccgaatctaattataagtgcgatgaccaaaatatatactacggagtagatacgaattataatgccatactaatcgtctgaccaatttcctaagcaaaaaatgcagaccactaatcctcgacaaaatccagcttactatcgcactagagtgtatgtacctggggttgcattttcaaaatggggggtttagccggaaggggccgaaattgcaatcactgacctggagtggaagaattttgagggataaaaaggatataaaataatatctccgggtagcaatcaaggccttatttcttttgcaaattgcggtgggagatgtgctccatcaactaccttcatccaaaagaccaaatatagtcattgactaaaattatatactccctccttccccaaatgtttgacaccgttgacttttttaaacatgtttgactgttcgttttattcaaaaacttttgtgatatgtgtaaaactatatgtatacataaaagtatatttaacaataaatcaaatgatagaaaaagaattaacaattacttaaattttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgttaaacattttgggatggaagtagtgacatgcaaaagcatgtccacaactactacaacacagcattttgtagaatataaacattaagcaaaaaatttgggacacatatagaagcattagattctagacaaagactagcaagaacatgttgataggacacccaagtggtcaaacttttagttaacgtacgtccacataagactaaattagctgcacactaacatataccacatgatgacctgtaaagtctaaacatttaatcacatgtataagagtttccccactgtaacagcaaggtcaataatatagccagttaatggctccaaaaatttccatatcatctacggccatagtttgagacgcatgatacaataataaactgaagtgaacagatttctgaatattatttttcattttatttattgcattgcatgttcttcatttgcatataacaaggctaactgatgctcatctatttgctagccaatcactgaacctttgcagtatcttggagctcgtgaggagttgacgataatttagtcgccggttgaatctctctctctttaacttttgcttttaactcagctttttaagccacagtggacagctatcgctagcttgaagcatctattgcacctgctctaaaagcctaaccactcgctcacgtactccctccatcccaaaatatttgacaccgttgacttttttaaaaatatttgaccattcgtcttattcaaaaaatttaagtaattattaattctttttttatcatttgatttattgttaaatatacttttatatatacatatagttttacacatttcacaaaagtttttgaataagacgaacggtcaaacatatttaaaaaagtcaacggcgtcaaacatttagagaaggagggagtatatagcagtttccccaatgtaaattctaaacagtaaatcacatatattagagctacccaatttaaagacaaaacatttaatcactcatttctgacttctgagtttccccaatgtaaggtctaatcaccttattaaagagtaaaataaaatagggaagagtttggaactggagtttacataattccatgtttacccatacagaacagaaacacaaaggtatgatcattctgtaaagttgatttgaatccacatgccatgtagaacatgcgcactgcattgtttggtcgacaagagagcttctcattcaccttaagcttactgaattgatttctcttcttttagatatgtacagtcacatactgaatggattaatgcacattatgtatggaattccggtgtgctgaatttccagggtgacacatactgaattgatttctaaacgtataaaacagggagcaatcatgctgcatgctcgtaatttccaaagaaaaataggcatgtgatctgcaagattcaatatataagcacctattttttttttgtatgatctatacctgaagtcctaaacctgctttatctacataacgtcagaaacaagaccattggttactcagctgtgcggccattgcaacagaatactgaaaaagaatgtagttgttttactgctgatctggaaagtgtatctgattgttctgtgcagcatacagtaatttgaagggcattttggctctgcttgcctgcacaatttgtcaaaagccacagcaacaaggaagctaacgtttgagctaaccgcaaacagtgaattttgccgaaatgagatagatgcgaattttcagttatcacagccactaatccctctatcctacaagtattcatatcaacttagaaatgaaaataaatagagatgaaactcacagcgcgatccagcaatcggaccctcgcgccctacaaattcactgccatggattcaaatttactgtagctatgtttggataatgggtttaggggggggattgggatagggatatgagtggagggttgagatgaaacgagatatgaagaatgaacggctaggattaaaagttacccttctagaaggtgggaaggtgggataagatttcccctcctattatccaaacatggcctacaatttttgtttagcagagaaatcgaacctaacatttgaatatttgatgatcggtaggtaaaacatttccatttcaacaacagtggccagttagagcagagaggggatgatgccgacggacgtgacaccgttgatgaggaccatcatcaggtcatgcaaatgcaaccaaaaaaacaaacaaacagtattcttgttgttttcatcatgcgtgggggagagatcgccctttttttattattttttataaggttattttttatccggcctctatatccaaccggatctaccaaatcgcatgtagcctagtggttacaatgatctgagtagcatcttaagatcatgagtttttataggagtgaattttagattagttatttgaggggtttaattccactagtaatatgcgtgggaccatacccatataattggagtttgggtacgtggtggatggattcagaataaaccaagtga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caaagacctcctccgaaatccaccgagctctacttgaggtgcttgaatttatcaggcaaagcat
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| CDS seq | atgatgcagagaacaatgcagctcgttctcagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatctcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
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| Protein seq | MMQRTMQLVLRVKRSSGLLHQFSTAANSQRLAGKVAVITGAASGIGKASAKEFIGNGAKVILADVQDDLGRAVAAELGPGATYTRCDVTDEAQVAAAVDLAVARHGALDVFYSNAGVLGSIAPAPLASLDLGEFDRVMAVNARAAVAAAKHAARAMVPRRSGCVLFTGSVSGVVGGTGPTSYGVSKAAVLGVVRAVAGELARHGVRANAVSPCGVATPLSMVQVLEAYPGMSFEELKNAMAASMEQMEAGPLIDPEDVARAAVFLASDEARYINGHNLVVDGGFTVGKLLKIPKEGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA |
||||||||||
| Function | Secoisolariciresinol dehydrogenase (Fragment) [UniProtKB/Swiss-Prot:Q94KL7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0026650 | OsCMeo_07g0026650.03 | Chr07 | 27542208 | 27555725 | + | NAM | ||
| CDS seq | atgatcaacgcagctgggcaacttcttctcagggggaggagcagaggtgttcgtccgatgttctcttccggcctggccgatcgctccttctcctcgtcggcgtcaagctccagaaagttggatgggaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggtcatccttgccgatatccaggacgacctcggccgcgcggtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcacggtggaggcggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggtcgtctcgacgtcgtgtacagcaacgccggcatcgccggcggcgcacctccggccacgctcgcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgccaggtccatggtggcgtgcctcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggcgagctccacggcggtgctcggcaacatcgggcccctcgcgtactccatgtcgaaggcggccgtcgtcggcatggtgcagacgacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacaccatctcgccgcacgccatcccgacggctatggcgctgggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggcttcactgtaggcaaggaatccggccgagcagctagccgcctaccttccgattccccgcgtctagaccgccagctcgccactgcgttgctcgcctataaaaggagcccgagctctcccaaattccccacaccattcccatctctctctcctctttctctccctcgttttgctctctgtaccgccacctatagccgttatgccgcgccttctagcgccgccgtcaccggcggtgcctcgctggagcaccgcccgaggtcgccaccgcctctcctggccgccggccgcggagccgcgccccgctgccgcggcaccttgccgcctcaagccgagcaaagcgagagcaggaagacgaagccgagcctcgcctcccggcgccgccgtcgccgccggagccccaccggagtccgccgccacctccctcggccgctggtcgcctcgccgcgccccatcgccgcgagcatagctgctcacgtattcttctcctcgtcgtcaagatccagaaagttggatggcaaagtggccgtgataaccggcgcagcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggttatcattgccgatatcaaggatgatctcggccgcgccgtggccggcgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgcctcggccgtcgacctcgccgtggcgcgacacggccgcctcgacgtcgtgtacagcaacgccgccatcgcgggtggcgcgcctccggccacgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgccaggtccatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccccgccgcgccggttgcatcctctgcacggccagcacggcggcggtgctcggcggcatggcggcgccggcgtactccatgtcgaaggcggccgtcgtcggcatggtgcggacggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgcagtcccgacgccgatggcgataggtctcttctccgagacgttcccggcggcgaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaaggggcgtcgctggaggtggaagacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcatcaccggccacaacctcgtcgtcgacggcggggggaagagcatagctgctcaggtgttctccaacggcttggccgatcgcctcttctcctcgtcgtcaagctccagaaagttggatggcaaagtggccgtgatcaccggcgcggcgagcggcatcggcgaggccacggcgaaggagttcgtcaggaacggcgccaaggttatcattgccgatatccaggacgacctcggccgcgccgtggccgccgagctcggcgccgacgccgcgtcgtacacgcactgcgacgtcaccgtcgagaaggatgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcgtcataggagcaccggctccggcctcgctcgcggcgctcgacctcgacgagtacgaccgcgtcatggccgtcaacgcccggtcgatgttggcgtgcgtcaagcacgcggcgcgcgtcatggcgccgcgccgcgccggctgcatcctctgcacggccagctcggcggcggtgctcggcggcgtggcgtcgccggtgtactccatgtcgaaggcggccatcgtcggcatggtgcgcgcggtggcgaggcagctggcgcgcgacggcgtgcgggtgaacgccatctcgccgcacgccatcccgacgccgatggcgctaggcatcatcgccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggagatgcaggagctggaagggacatcgctggaggtggaagacgtggcgagggcggccgtgttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgacggcggcttcacggtgggcaaagacctcctccgaaatccaccgagctctacttga
More
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| Protein seq | MINAAGQLLLRGRSRGVRPMFSSGLADRSFSSSASSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVILADIQDDLGRAVAGELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGGAPPATLAALDLDDYDRVMAVNARSMVACLKHAARVMAPRRAGCILCTASSTAVLGNIGPLAYSMSKAAVVGMVQTTVARQLARDGVRVNTISPHAIPTAMALGIIAETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGFTVGKESGRAASRLPSDSPRLDRQLATALLAYKRSPSSPKFPTPFPSLSPLSLPRFALCTATYSRYAAPSSAAVTGGASLEHRPRSPPPLLAAGRGAAPRCRGTLPPQAEQSESRKTKPSLASRRRRRRRSPTGVRRHLPRPLVASPRPIAASIAAHVFFSSSSRSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIKDDLGRAVAGELGADAASYTHCDVTVEKDVASAVDLAVARHGRLDVVYSNAAIAGGAPPATLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASTAAVLGGMAAPAYSMSKAAVVGMVRTVARQLARDGVRVNAISPHAVPTPMAIGLFSETFPAATAEEVRRMVTREMQELEGASLEVEDVARAAVFLASDEAKFITGHNLVVDGGGKSIAAQVFSNGLADRLFSSSSSSRKLDGKVAVITGAASGIGEATAKEFVRNGAKVIIADIQDDLGRAVAAELGADAASYTHCDVTVEKDVAAAVDLAVARHGRLDVVYSNAGVIGAPAPASLAALDLDEYDRVMAVNARSMLACVKHAARVMAPRRAGCILCTASSAAVLGGVASPVYSMSKAAIVGMVRAVARQLARDGVRVNAISPHAIPTPMALGIIAETFPAATAEEVRRMVTREMQELEGTSLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSST
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0026650 | OsCMeo_07g0026650.01 | Chr07 | 27525662 | 27539928 | + | NAM | ||
| CDS seq | atgatgcagagaacaatgcagctcgttctcagggtgaagagatcgtcgggtttactacaccaattctccactgcggcgaactcgcagaggttggccgggaaggtggccgtcatcaccggcgccgccagcggcatcggcaaggcgtcggcgaaggagttcatcggcaatggcgccaaggttatactcgccgacgtccaggacgacctcggccgcgccgtcgccgccgagctcggccctggcgcgacgtacacgcggtgcgacgtcacggacgaggcgcaggtcgccgcggcggtggacctcgccgtggcgcgccacggggcgctcgacgtgttctacagcaacgccggcgtcctgggctccatcgcgccggcgccgctcgcctccctggacctgggcgagttcgaccgcgtcatggccgtgaacgcccgcgccgccgtcgccgccgccaagcacgcggcgcgcgccatggtgccgcgccggagcgggtgcgtcctcttcacggggagcgtgtcgggcgtggtgggcggcacggggccgacgtcgtacggcgtgtcgaaggcggccgtgctgggcgtggtgcgcgccgtggccggggagctggcgcgccacggcgtgcgggcgaacgccgtctcgccgtgcggcgtcgcgacgccgctgtccatggtgcaggtccttgaggcctaccccgggatgagcttcgaggagctcaagaacgccatggcggcgtccatggagcagatggaagctggcccgttgatcgaccccgaggacgtggcgagggcggccgtcttcctggcgtccgacgaggccaggtacatcaacggccataacctcgtcgtcgacggcggcttcacggtggggaagctgctcaaaatccccaaggagggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatctcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
More
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| Protein seq | MMQRTMQLVLRVKRSSGLLHQFSTAANSQRLAGKVAVITGAASGIGKASAKEFIGNGAKVILADVQDDLGRAVAAELGPGATYTRCDVTDEAQVAAAVDLAVARHGALDVFYSNAGVLGSIAPAPLASLDLGEFDRVMAVNARAAVAAAKHAARAMVPRRSGCVLFTGSVSGVVGGTGPTSYGVSKAAVLGVVRAVAGELARHGVRANAVSPCGVATPLSMVQVLEAYPGMSFEELKNAMAASMEQMEAGPLIDPEDVARAAVFLASDEARYINGHNLVVDGGFTVGKLLKIPKEGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0026650 | OsCMeo_07g0026650.02 | Chr07 | 27531887 | 27539928 | + | NAM | ||
| CDS seq | atgtacagcgcccttcacctcgttcagaggggcaagagcagagcagggttgacgatgttgactggattcgtcaaccgcttctcttccgtgtcaagacccgaaaggttggctggaaaggtggccgtgatcaccggcggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaagtcatcatcgccgacgtacaagacgatctcggccacgccgtcgccgccgagctcggcccagatgcggcctacacccgctgcgatgtcaccgacgaggcgcagatcgcggcggccgtggacctcgccgtggcgtgccacggccgcctcgacgtcctgcacaacaacgccggggtcacgtgctcctacgtggggcccctcgcctccctagacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgcggcgcgcgtgatggcgccacggcgcgccggctccatcctctgcacggccagcgtggcgggcgtgatcggcagcgatgtcccccacgcgtacagcgtctccaaggcggcagccatcggcgtggtgaggtccgccgccggcgagctggcgcgccacggcgtgcggctgaacgccatctcgccgcacggcatcgcgacgccgctggcgatgcgcgggttcggcgacgtgctggcgtgggcggacgccgagagattgaagcgggtcatcgaggaggacatgaacgagctggagggcgcaaagctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacatcactgggcataacctcgtcgtcgatggcgggttggctggaaaggtggccgtgatcaccggtggcgcaagcggcatcggcgaggcgacggccaaggagttcatccgcaatggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatggcggtgaacgcccgggcggtgctcgccggcatcaagcacgccgcgcgcgtgatggcaccacgacgcaccggctccatcctctgcacggccagcgtggcgggcatgatgggcggcgagatgccccacgcgtacaacgtctccaaggcggcggtcataggtgtggtgcggtccgccgccggcgagctggcacgccacggcgtgcggctgaacgcgatctcgccgctcggcatcgcgacgccactggcgatgcgcgggttcggcgacatgctggcgtgggcggacgccgagcgggtgaggcggctcatcgaggaggacatgaacgagctagagggcgcgacgctggaggcggaggacatcgcgagggcggcggtgtacctcgcctccgacgaggccaagtacgtcaccgggcataacctcgtcgtcgacggcgggttcaccgtcgggaagcggctcaactctgtatactccgaggaacctggaagcgaaccaaatttcacgatgatgagcgtagcagccaacaaaattctcagggggaggagcagaggtgttcgtccgatgttctcttccggcttggccgatcgcctcttctcctcgtcggcgtcaagctccaaaaggttggaagggaaagtggccgtgatcaccggcgcggtgggcggcatcggcgaggccacggcgaaggagttcgtcaggaatggcgccaaggtcatcctcgccgatatccaggacgaccttggccgcgccatggccgccgagctcggcgcggacgccgcgtcgtacacgcactgcgacgtcaccgtcgaggcggacgtcgccgcggccgtcgacctcgccgtggcgcgccacggccgcctcgacgtcgtctacagcaacgccggcatcgccggcgccgcggccccgcccacgctctcggcgctcgacctcgacgactacgaccgcgtcatggccgtcaacgcccggtccatggtggcctgcctcaagcacgcggcgcgcgtcatgtccccgcgccgcgccggctgcatcctctgcacggcgagctccacggcgctgatcggcgacctggcggcgccggcgtactgcatctcgaaggcggccgtcgtcggaatggtgcggacggtggcaaggcagctggcgcgcgacggcgtgcgcgtgaacgccatctcgccgcacatcatcccgacggcgctggtgacgcgcgtcatctccgagacgttcccggcggccaccgcggaggaggtgaggaggatggtgacgagggacatgcaggagctggaaggggcgtcgctggaggtggaggacgtggcgagggcggccgtcttcttggcgtccgacgaggccaagttcgtcaccggccacaacctcgtcgtcgatggcggcttcacggtcggcaaggacctcctccggaatccaccgagctttgcttga
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| Protein seq | MYSALHLVQRGKSRAGLTMLTGFVNRFSSVSRPERLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHAVAAELGPDAAYTRCDVTDEAQIAAAVDLAVACHGRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRAGSILCTASVAGVIGSDVPHAYSVSKAAAIGVVRSAAGELARHGVRLNAISPHGIATPLAMRGFGDVLAWADAERLKRVIEEDMNELEGAKLEAEDIARAAVYLASDEAKYITGHNLVVDGGLAGKVAVITGGASGIGEATAKEFIRNGAKVIIADVQDDLGHTVAAELGPGSAYTRCDVTDEAQIAATVDLAVARHGHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRTGSILCTASVAGMMGGEMPHAYNVSKAAVIGVVRSAAGELARHGVRLNAISPLGIATPLAMRGFGDMLAWADAERVRRLIEEDMNELEGATLEAEDIARAAVYLASDEAKYVTGHNLVVDGGFTVGKRLNSVYSEEPGSEPNFTMMSVAANKILRGRSRGVRPMFSSGLADRLFSSSASSSKRLEGKVAVITGAVGGIGEATAKEFVRNGAKVILADIQDDLGRAMAAELGADAASYTHCDVTVEADVAAAVDLAVARHGRLDVVYSNAGIAGAAAPPTLSALDLDDYDRVMAVNARSMVACLKHAARVMSPRRAGCILCTASSTALIGDLAAPAYCISKAAVVGMVRTVARQLARDGVRVNAISPHIIPTALVTRVISETFPAATAEEVRRMVTRDMQELEGASLEVEDVARAAVFLASDEAKFVTGHNLVVDGGFTVGKDLLRNPPSFA
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_07g0026650 | OsCMeo_07g0026650.04 | Chr07 | 27534644 | 27537461 | + | IsoSeq | ||
| CDS seq | atggcgccaaggtcatcatcgccgacgtacaagacgatctcggccacaccgtcgctgccgagctcggcccgggctcggcctacacccgctgcgacgtcaccgacgaggcgcagatcgcggcgaccgtggaccttgccgtggcgcgccacggccaccttgacatcctgtacaacaacgccgggatcacaagctcctctgtggggcaccttgcctccctcgacctcgccgacttcgaccgcgtcatgg
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| Protein seq | MAPRSSSPTYKTISATPSLPSSARARPTPAATSPTRRRSRRPWTLPWRATATLTSCTTTPGSQAPLWGTLPPSTSPTSTASW |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0665000 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g46860 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0665000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0021740 | RBH | 0.000000 | 0.000000 | 2.932166 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0026830 | RBH | 0.0 | 0.0 | 3.480390 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0026610 | RBH | 2.168056 | 7.725956 | 3.740138 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0026380 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0026610 | RBH | 0.0 | 32.189693 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0395800 | RBH | 0.236164 | 0.6171315 | 17.595075 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0027080 | RBH | 0.000000 | 0.000000 | 0.023597 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0468300 | RBH | 0 | 0 | 0.0581265 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0026410 | RBH | 0.0 | 0.122489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0026830 | RBH | 0.0 | 6.555653 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0026500 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0026860 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0026350 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G026570 | RBH | 0.0 | 0.0 | 0.585537 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0026340 | SBH | 0.098370 | 0.0 | 0.618520 |
