Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_04g0017320 | OGI:04072210 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr04:23584958-23588274 | ||||||||
| Gene Symbol | BGLU11, Os4bglu11, Os4BGlu11 | ||||||||||
| DNA seq | actcaatttcgatgttcaatgaaaaaaaagaaggcaatgcgtgcgactcttttcatccctgtttcatttctcggaggaacttcttgaaccaatgggctgaattcttggggtgtctcttcatcccatcatcgtaatccacaaagtttagcccaaaccggagtgtgtagccatccgcccactcaaagttgtcaagcagagaccatgcaaagtaccccttcacgtttgctccatccctgtggaggcatatggaataatgcagtgttagtaccatctttaagttgtctactgatagctgagtgtctgaattgatgttctgacctcatagcatttcgcagggcgagaaggtgcttgtgataatattctatcctcgtattatcattcagggcctccttgagtggcatggtcttgttattgacttcatcaacaccttgagatgtacgagtacaaaggatcagtaagattcatacacttttagttagaagctagaggagaactctctctctctctctcacatagataggagaagaaaaaatattcaagtcctatgtgcacttactggctagattggggagaaaataggaaaatagaaagaagaatcagaaggtgttatagtagtgttggtttgaacaaatgcggagaaattgtatgacctatatgtttgtgggaacttaccattttcagtaataaagatggtaggattgccgtagttttccttgatataaagcaacaattcacggagcccttgagggtatatatgaagccaagatgaagcagcctacacacatattgtttatagagttcaatcatgtcacctgatcattgttttgcacttttactaataatttgttttgtgggtaacaaagctgtaggtcacctgaggaccaatgagagtaccgtttcgactacctagcataattgggcaaggttagcacctagtagcaaaaaaaaaagctacaaaatgcatgtatccaaaattccaaaaaaattgccatatgtttatatttcatggttcaaacgcacaaaagaagttgactgatcccagaatatgttgactcaccggtaatcctagcgtggaaatcagtattgtagctgttcttaagaccatacgatggaagaacattctcagcatagcttgaagagtagtaattaagtccaatgaaatcaaatgcacccttgaccatttcagattgctctttggtgaactttggcaagcgatttccaaccaattctctcatgtttagggggtagtcccctctaatgagaggatccataagcctagaaaggatttcatagttagaattttcagtctcctaatgaagaaattatgtgtgacaaagaatttaccatccaagcacgaaatctagaacacgtcttgctgcatccttgttggttttggatggggagaagggaacataccactgtgagttcacaattattccaatcttccccttttgtaaggcctgcatttgtcaagcattttgttgttccttttgatttgaaaaacagaattgattctactaagcattcaatctgcatgcatggtcaaaggttttgtgttccctaaaaataatattaacaacaaatgtataacaatcatgttcaaattataaggccttgaacgtattatcatgtagcagtaaattgcagaagctttgaatatatcactggactagaatatgcatgtctccatttcataatatgcaggatataaattagcgctgcagttaataaagtaattagctagtcaagttacccgcagaaattgtgagctagctatcagaaacatttgtgatgttggatactgatatgtgtttgaatttgaagataacttaatgggagatgttttgctttttatgaatttattgcttttcttatcaactctaaagtctttcattgaatttagcatgaaaataataaaataataggagtatatctttaacctaaccaacagatccagacctttgtattaggaggaccgagattaaggcatgatgttttgtttttatgtgagaaggtcttgtataatacataaatattttctctgacctattttgacctctctaactagggcacataacacattgggattaagtgccaatttttattgttttttttgtgaattctagaatttctttcctttttttccttatcaactactactagtaaaggttaatgtctgtactggcaaactctaccaccaggacctggctgaaagtgaatgccaagcaataagtaattttggattatgaaacttaactttgcggatcttcgatgtaaatcattatcatggatgaactgcgactgcctgacaacttcttcagtgaactgatatttctctctgtacaaccgaacagtttctgcgtgggcaagtagttggtgatggcatgcagtgtaaggctcccttcctgaatctccaacgctgcattttcccatctcccagggtgaacaccggcccggggcataggtgccagatgcataggccttagagcagaagatccaaggctcattgaaggtgatccaatgtttcactcggtcaccaaactctttgaagcagatttcagcatagtccttatagtcatttctgcaatagttcttcacagtcagtaactttagcacttttttcatggcaaataacactaggatgttttagctgaaaatactatatgaagggaacactaatgtggatggtgtcgatgcaacaagggttaaatcttgtccttcaacaaatcacagtaaacaatattcacaagaaaatggggaagggaactccaaaggcttttggcattgaaatattgggtattttaattgatatgcatgatgacgtggacaatatttttctgaagtatataacatggtccctagtatttatggaaaacattattcagctgtagacactctcctatcttactgggttgtgtttactaaccaggtcagaccccaatttaacttttccagatttaacttgtaatataattaagtagcaaatggtactgaagaattgttgacttacatgatattagggctaagaaatccgttgtatttatcttccagtgcctgaggtgtgtcataatggaaaagggtaacaaatgattggacccctgcaaatgtattaagattattttgcattttggaaaaggaaatctggcataccaagggatggagctaatggtttccacaagttgcatctagccactgaacttgaaactaaacagtgaagattagacatgaatgcctttcaataatagctcattgatcaaattgttgtagtagttgatgccttctatgttgactccaccattcagacttccatctgccat
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| CDS seq | atgcaggccttacaaaaggggaagattggaataattgtgaactcacagtggtatgttcccttctccccatccaaaaccaacaaggatgcagcaagacgtgttctagatttcgtgcttggatggcttatggatcctctcattagaggggactaccccctaaacatgagagaattggttggaaatcgcttgccaaagttcaccaaagagcaatctgaaatggtcaagggtgcatttgatttcattggacttaattactactcttcaagctatgctgagaatgttcttccatcgtatggtcttaagaacagctacaatactgatttccacgctaggattaccggtgacctacagctttgttacccacaaaacaaattattagtaaaagtgcaaaacaatgatcaggctgcttcatcttggcttcatatataccctcaagggctccgtgaattgttgctttatatcaaggaaaactacggcaatcctaccatctttattactgaaaatggtgttgatgaagtcaataacaagaccatgccactcaaggaggccctgaatgataatacgaggatagaatattatcacaagcaccttctcgccctgcgaaatgctatgagggatggagcaaacgtgaaggggtactttgcatggtctctgcttgacaactttgagtgggcggatggctacacactccggtttgggctaaactttgtggattacgatgatgggatgaagagacaccccaagaattcagcccattggttcaagaagttcctccgagaaatgaaacagggatga
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| Protein seq | MQALQKGKIGIIVNSQWYVPFSPSKTNKDAARRVLDFVLGWLMDPLIRGDYPLNMRELVGNRLPKFTKEQSEMVKGAFDFIGLNYYSSSYAENVLPSYGLKNSYNTDFHARITGDLQLCYPQNKLLVKVQNNDQAASSWLHIYPQGLRELLLYIKENYGNPTIFITENGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAMRDGANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLREMKQG |
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| Function | Beta-glucosidase 10 [UniProtKB/Swiss-Prot:Q7F9K4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0017320 | OsCMeo_04g0017320.02 | Chr04 | 23584958 | 23586423 | - | NAM | ||
| CDS seq | atgcaggccttacaaaaggggaagattggaataattgtgaactcacagtggtatgttcccttctccccatccaaaaccaacaaggatgcagcaagacgtgttctagatttcgtgcttggatggcttatggatcctctcattagaggggactaccccctaaacatgagagaattggttggaaatcgcttgccaaagttcaccaaagagcaatctgaaatggtcaagggtgcatttgatttcattggacttaattactactcttcaagctatgctgagaatgttcttccatcgtatggtcttaagaacagctacaatactgatttccacgctaggattaccggtgacctacagctttgttacccacaaaacaaattattagtaaaagtgcaaaacaatgatcaggctgcttcatcttggcttcatatataccctcaagggctccgtgaattgttgctttatatcaaggaaaactacggcaatcctaccatctttattactgaaaatggtgttgatgaagtcaataacaagaccatgccactcaaggaggccctgaatgataatacgaggatagaatattatcacaagcaccttctcgccctgcgaaatgctatgagggatggagcaaacgtgaaggggtactttgcatggtctctgcttgacaactttgagtgggcggatggctacacactccggtttgggctaaactttgtggattacgatgatgggatgaagagacaccccaagaattcagcccattggttcaagaagttcctccgagaaatgaaacagggatga
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| Protein seq | MQALQKGKIGIIVNSQWYVPFSPSKTNKDAARRVLDFVLGWLMDPLIRGDYPLNMRELVGNRLPKFTKEQSEMVKGAFDFIGLNYYSSSYAENVLPSYGLKNSYNTDFHARITGDLQLCYPQNKLLVKVQNNDQAASSWLHIYPQGLRELLLYIKENYGNPTIFITENGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAMRDGANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLREMKQG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0017320 | OsCMeo_04g0017320.03 | Chr04 | 23584958 | 23586423 | - | NAM | ||
| CDS seq | atgcaggccttacaaaaggggaagattggaataattgtgaactcacagtggtatgttcccttctccccatccaaaaccaacaaggatgcagcaagacgtgttctagatttcgtgcttggatggcttatggatcctctcattagaggggactaccccctaaacatgagagaattggttggaaatcgcttgccaaagttcaccaaagagcaatctgaaatggtcaagggtgcatttgatttcattggacttaattactactcttcaagctatgctgagaatgttcttccatcgtatggtcttaagaacagctacaatactgatttccacgctaggattaccggtagtcgaaacggtactctcattggtcctcaggctgcttcatcttggcttcatatataccctcaagggctccgtgaattgttgctttatatcaaggaaaactacggcaatcctaccatctttattactgaaaatggtgttgatgaagtcaataacaagaccatgccactcaaggaggccctgaatgataatacgaggatagaatattatcacaagcaccttctcgccctgcgaaatgctatgagggatggagcaaacgtgaaggggtactttgcatggtctctgcttgacaactttgagtgggcggatggctacacactccggtttgggctaaactttgtggattacgatgatgggatgaagagacaccccaagaattcagcccattggttcaagaagttcctccgagaaatgaaacagggatga
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| Protein seq | MQALQKGKIGIIVNSQWYVPFSPSKTNKDAARRVLDFVLGWLMDPLIRGDYPLNMRELVGNRLPKFTKEQSEMVKGAFDFIGLNYYSSSYAENVLPSYGLKNSYNTDFHARITGSRNGTLIGPQAASSWLHIYPQGLRELLLYIKENYGNPTIFITENGVDEVNNKTMPLKEALNDNTRIEYYHKHLLALRNAMRDGANVKGYFAWSLLDNFEWADGYTLRFGLNFVDYDDGMKRHPKNSAHWFKKFLREMKQG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_04g0017320 | OsCMeo_04g0017320.01 | Chr04 | 23584958 | 23588274 | - | NAM | ||
| CDS seq | atggcagatggaagtctgaatggtggagtcaacatagaaggcatcaactactacaacaatttgatcaatgagctattattgaaaggcattcatatttccttttccaaaatgcaaaataatcttaatacatttgcaggggtccaatcatttgttacccttttccattatgacacacctcaggcactggaagataaatacaacggatttcttagccctaatatcataaatgactataaggactatgctgaaatctgcttcaaagagtttggtgaccgagtgaaacattggatcaccttcaatgagccttggatcttctgctctaaggcctatgcatctggcacctatgccccgggccggtgttcaccctgggagatgggaaaatgcagcgttggagattcaggaagggagccttacactgcatgccatcaccaactacttgcccacgcagaaactgttcggttgtacagagagaaatatcagttcactgaagaagttgtcaggcagtcgcagttcatccatgataatgatttacatcgaagatccgcaaagttaagtttcataatccaaaattacttattgcttggcattcactttcagccaggtcctggtggtagagtttgccagtacagacattaa
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| Protein seq | MADGSLNGGVNIEGINYYNNLINELLLKGIHISFSKMQNNLNTFAGVQSFVTLFHYDTPQALEDKYNGFLSPNIINDYKDYAEICFKEFGDRVKHWITFNEPWIFCSKAYASGTYAPGRCSPWEMGKCSVGDSGREPYTACHHQLLAHAETVRLYREKYQFTEEVVRQSQFIHDNDLHRRSAKLSFIIQNYLLLGIHFQPGPGGRVCQYRH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| MX | Chr04 | 23585732 | 23586015 | - | OsCMeo_04g0017320.02 | OsCMeo_04g0017320.02,OsCMeo_04g0017320.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.789420 | 2.970987 | 3.234540 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0474800 | SBH | 6.729942 | 11.612279 | 2.541452 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g39864 | SBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0474500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0016830 | RBH | 1.031633 | 0.366892 | 3.571010 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0017590 | SBH | 0.000000 | 0.000000 | 1.644609 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0017350 | SBH | 0.403977 | 4.460511 | 4.238048 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0017030 | RBH | 0.088822 | 0.017008 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017310 | SBH | 2.662956 | 131.483566 | 73.363663 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0369900 | SBH | 2.020888 | 5.9245855 | 7.5129575 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0016090 | SBH | 0.073161 | 0.292588 | 0.478872 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0368100 | RBH | 1.5054895 | 7.0764065 | 2.467973 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0016660 | SBH | 0.757983 | 1.589064 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0016520 | SBH | 0.765130 | 123.291840 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0016500 | RBH | 0.913782 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0017020 | SBH | 0.930369 | 0.861543 | 1.344414 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0017120 | SBH | 0.779639 | 195.932587 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G016300 | RBH | 1.053582 | 3.040397 | 6.534487 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0016350 | RBH | 0.506628 | 5.450799 | 3.831563 |
