Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g39864 | OGI:04072210 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:23735317-23742574 | ||||||||
| Gene Symbol | BGLU11, Os4bglu11, Os4BGlu11 | ||||||||||
| DNA seq | GCAAGAAGAGGAGAGTGAGATTTATTAATTTAGTCGAACCAATTTCATCTATTGTACTTAACTCATAAAACTTATATACTATTTCGATGTTCAATTAGAAAAGGCATTGTATGCAACTCTTTTCAACCTTTTGTTTCCATCTCTGTTTGATTTCTGGAGGAACTTCTTGAACCAACGGGCCGAGTTCTTGGGGTATCTCTTCATTCCGTCATCGTAATCCACAAAGTTTATCCCAAACCGAACTGTGTAGCCCTCTGCCCACTCAAAGTTGTCAAGCAGAGACCATGCAAAGTACCCCTTCACGTTTGCTCCATCCCTGTGGAGGCATATGGAATAATGCAGTGTTAGTACCATCTTTAAGTTGTCTACTGATAGCTGAGTGTCTGAATTGATGTTCTGACCTCATAGCACTTAGCAGGGCGAGAAGGTGCTTGTGATAGTATTCGATCCTGGTATCATCCTTCAGGGCTTCCTCGAGCGGCATGGTCTTATTATTGACTTCATCAACACCTTGGGATGTATTTAGAAAGAATCAATAATGTTAATTCACTTCTAGAAGAGGATAATGCCCTTTTTTTACATAGCTAGGAGAAGACTATTAAGTCCTATGTGCACTATTGTCTAGATTGAAAAAAAACCAACAATCAGAAGGTGTTATACAGTAGTATTGGTTTGCACACATGCTGAGAAACTGTATGACCTATATGTTTGTTGGAACTTACCATTTTCAGTGATGTAGATGGTAGGATTGCCATAGTTCTCCTTAACATAAAGCAACATTTCACAGATCCCTTCAGGGTAGATGTGAAACCAAAACGAAGCAGCCTACACACATGTTGTTTGTTGAGTTTTCAATCATGTCCTTTGATCAATTGATTTACTAGGAATTTGTTCTGTGGATAACAAAGTAGTAGGTCACCTGAGGCCCTATGGGAATCCCGTTTCGACTACCTAGCATAATTGGACAAGGTTAGCACATAGTAGCAAAAACAAGCTACACAATACATGTATCCAAACCAATATTTATCACATATTCATGATGAGATAATGTTGCTCACCAGTAATCTTAGCATGTGCATCAGTATTATAGCTGTTGTTATGGCCATGCGATGGAGGATCATTATCAGCATAGCTTGAAGTGTAGTAGTTGAGTCCAATGAAATCGAATGCACCCTTGACCATTCCAGATTGCTCTTTGCTGAACTCTGGCAAGCGATTTCCAACCAATTCTCTCATGCTTAGTGGGTAGTCTCCTCTAATGAGAGGATCCATAAACCTAGAAGGGATTTCATAGTTAGAATCTTCACTCTCATAATAATGAAATTATGTGTGAGACAAAGAATACCATCCAAGCATGAAGTCTAGAGCACGTCTTGCAGCATCACTGCTGGATTTGGATTGGGACAATGGAACAAACCAGTCTGCATTTAAAATTATTCCAATCTTCCCCTTTTGTAAAGCCTGCATTTGATAAGCATTTGGTCATTGTGAGGTGTGTGGAGTGTGATGTTGCGAGTGCTGAAGCTAAAGCCTTGATCTACTAGCAAACAGACTCAGCTTCAGCACTCAAACTATCATACACCACAACAATCGCTTATACAATACTAACTACTAATGCATATCTACATTCATGTTCAAATTATAAGGCCTAGAACATATTATTGCGTAGTAAAGTGCAGAAGTTTTGAATATAACGGTAGGCTAGAGTATGCGCATGTCTATGTATCTGATAGGAATCTGTTTCATGATAATGCATGATATAAAATAGCGCTGCAGTTAAAAAAGTAACTTGCTAGCCATTTAGCCAAGTTACCTGCACAAATTGTGCAGCTAGCTATCATATACATTAATGCTTATTTGCAAATTGTATTTTACATGTTTGTTGGTTTCAACTTCCTCGTATAACTGTGTTGTTGGCTACTGATATATGTTTGAATTTTGAAAATAACTCAACTGGCGATCTTTTGCCAAGATTAATGGTGAATGTTTTGCTTTTATTTTTTTTCTTTTTTCATATCGACTCTAAAGGCCTTTCATTGTTTTTAGTATGAGCGAGACTCCGGCGCTTTCTACTGGTAGTAGAATTAATCTAAGCCGTTGATAATTTTTAATCTAATGTACCTGATCTAATTATACTTCCACGTCAATTAAGGGTAGTAGAAAAGTGGAAGGACATAATAGTCCATCGCAAAATGGAGTGGAGGGATAATATTGTAACTTCGCACATAACGGCGGTCACCACGCATCCGTTCCCCTATCAATCCATCTGCCCACGGACTGCTGCAGCTGGCTCCCTCCTCCCCGACGGCGCGCTCAGTAGCTATCGGAATTCGGAAGCGGGGTGACAGCGCTGTCGCGCTGTGGTCATGGACAGGGGACGGGCTGGGGTCGTCGCGCCCGACCAGCAGCTTATGGAATGACTACTAGCAGGTCTATGGCTTCAGAGCAATTACAGTATGGATATGGAAGAGAAATCGTGAGTGCTACTGCTTATACGTTAAATTTGGCTGTTTAGATCTTCCTGAATGGATCGATTTAACACTTATTTATGTGCATGCACCATCACGTTACTTGCAAACAGCTTTTCGACAGATTTATCTGCTATTACGCGAGTTCATAATTTTTCAGTTTTCAAGGTAGCAGACTAGCAGTTGTCTAATGAATGCCTGCGTGAAATGGGTTTCAGTACCTGCTGGAAAGCAACCAGTCGCACATTGCATAGTATTGCTGTCTGGTCCAAACAGAGATTACAAAGCGCTGCCGGCAATTTTTGCCGCGCCGCCACCTGCCGGGAGGAGTCGCGATAAGTAACATGCAAGATGCAGTTCCTGCGTCGGGCCTGATGCAATTAAGCGAATGAGACAGAGAAATCATCCTCCAGCCAAAATTACCCCTAATATGTACTAGGAGATTACTAATCTACCCTTTAAAATAAACGGTCAGGATTAATTCTACTCATAGTATAATATTACAAGTAGAAAGCACCGGAGCGTTCCCCTTTTAGTATATAAATATATCTCCAACCTAACTAATAGATCCAGACCTCTGTATTAGGGCATCGAGATTAAGACATGATGTTTTGTTTTTGTGTGAGAATTTATAGGATTATGTTTTCCCCTTGAGTCTGGAGGGCCTTGCATAATAAACAAATAAATATCTCTCTTACCTATTTTGACCTCTATACCTGACCTTGTGATTAAGGGCCAAATGTTTTATTTTTCTTCTTAGGATTCTAGGATTTCTCTTATCCATATTGACTATTTGGTATTGTGGTGTGTGTTTCATCGAGTTTTACCATATTACAGTTCATAATAAGAAGAGTAAATTTCACACTACATATATTTTGATCAAACTATCACAAAATTATATATTTAAGACGGTGTATCACAAAATTATATATTTAACTATTTCAAAAAAACAAAATTATATATTTAGAGCTAAATTTATTAAGATGAAGTATCACATATTTACAGATTTGGTAACAAAATTATGACAAAATTACAAGTTTAGCACCAATTTAATCGTAAAACTACAACTTTTATAGCTCAAACATAATAGTAGTGCTTGGGATTTAAACTCTAAAATATGTAATTTTGTGATAATATTAAAGCTGTAGTTTTGTAATGCTTGGCTTTAAATATGTAGTTTTGTGATAACTTTGCTAAATTTATAGCTTTGTGATACAACATGTTAAATATATAGTTTTATGATAGTTTGTATGAAGTACTTGTATTTTTGTGAAATTTACTACAATGAAAAATAACAATGTAAGATCCGCTAATGTCTCTACTGATAAACTCTACTACCACCACCAGGCCCCAGCTGAAATTGAATACCAAGCAATAAATAATTTTGGATTATGAAACTTAACTTTGCGGATCTTCGATTTAAATTATTATCACGGATGAACTGCAACTGCCTGACATTTCCTTCAGTGAACTGATATTTCTCTTTGTACAACCGAACGGTTTCTGCGTGAGCAAGTAGTTGGTGATGGCATGCAGTGTAAGGCTCCCTTCCTGAATCTCCAACTCTGCATTTTCCCACCTCCCAGGATGAACACCGGCCTGGTGCCATGATGCCAGATGCATAGCCCATAGAGCAGAAGGTCCAAGGCTCATTGAAGGTGATCCAATGTTTCACCCGGTCACCAAACTCTTTGAAGCATGTTTCAGCGTATTCCTTATAGTCATTTCTGCAACAGTTCTTCACAGTCAGTAACTTTAGCACTTCTTTGATTGCAAGTAACAGTAGATGTTTTAGCTGAAAAGACTATCACAATGGAGCACTATTAGGGCTGGTGTCAGTGCAAACAGCGGTTAAATGATAAATCCTGTTCAAAGCAAAACACCTCCCGACTTCCCTTTCCACAAATCGCAGTAAACAATACTCCCTCCATCCCAAATTGATCATCATATATGTTTATGTACCAAGACTAATGATAATTTAAATTGCATCAATCAAGACACTATGCACACGTTCTTCCATAATGCATGTGTTGATTAAAACATCATGTCAATTACACCCTAGCATGCACACATTCTCCCATACTGAATTAATTGTATTATGATAAAATCCGTGTCCATACGGTTATATGTTGATCAATTTGAGAAATTTTAGATTCCATTGTATGATGATCAATTTAGGAAGGAGTGAGTATTTGCGACAAAAATGGGAAGAGAACTCCACAAGCTGTTGACATTGAAATTTCGGGTAATAGCGATGAACTACGGAACCCTTCAACAACTACGTATTTACATCAATGCCATGTATTTTTTTTTCTAAAATACCCTTCTACTACACTACTACTCAATCTAATAGGTGCAGTAGAAACAAATATGATCTGTTGGATCTACTACAATAAACGGCTCGCATTCACTCAGTGGTACTCTAAAAAAAATCCAATTGATGTGCATGATGAGGTTGACAATATTTATAACTGAAGTAGGTAACACTGCCCCAAATATTTTTTTAAGTTAGTGTTTATTTAACCTGGTCAGCAAAAGGTACCGAAGAATTCGGTTTCAAAAGATAAAAAAAGGTACTGAAGAATTGTTGACTTACATGATATTAGGGCTAAGAAACCCTTTATATTTATCTTCCAACGCCTGAGGTGAGTCCCAGTGGAAAAGGGTAACAAATGGTTGCACCCCTGCAAATGTATAAGATTATTTTTGCATCTTGAATAAAGAAATCTGGCATACCAAAGAATGGAGCTAATGGTTGTCACAAGCTGCATCTAGATTCTGAACTTGAAAGTAAATGGTGAAGACGAGACTTGCATACCTTTCGATAATAGCTCATTGATCAAATTGTTGTAGTAGCTGATGCCTTCTCTGTTGACTCCACCGCTCAGACTTCCATCTGCCATGTCAGTGAGATTTTAACCCTGGTTGGATCACCTTGGAGATTGAAAAAGAAATGCAAAATATTGTGCTTGAGAACAAAAGAGAAAACATATTTAGATAACCTCTATCTGTTGGTAAGTCTATGACAGTTCATTGTATCTATCATTATTTTTTTCCTAAAAGATATGGTCACGCACTTGGAAGAATTCTTGACCATGAGATGGAGAATCTGTATGCATCCATCCCCATCTCCTTCATACTGCGCACATCTTCCTGCATTTTTTGGTGGCCAGGCCCTCAGGATGAGTACTAAATTAGTCCTTTTAAAGAATCTTAGAATTAAAGTTTGAAGAGATCGTGGCAGAGGCAGACTGGCAAACATGTTGTGTATATTTGACTAAAACCTTTACAAAAGATCAATTAGAAATGGCCATGACAGCAACTTGAAAAATGCTATGAGTAATTGCTAATACCTTGTAGAGATGGTAGCTGTCGCAAGCCACATCGCCATTGCTTCTGTCAGTGATTTTGTCTGCCAAATTGGCGGATTTTCAATTCAAAATAATGTCTCATTGCCTTTCCTTTCTTGCCATTTACAGTTAACATGCCTGGAGACTGATGTGTGAAGGTGTCCCAGATGCTTGGTCCTCTGCCACCCAACACTGCGCCACCCTCGAACTGCATCATGTGTAAAACAACAGTCAATTCGTCAGGTTTATTTCAGACCTGAAACAGAGCACATCGTGATGAGTTGAGAAGGAATCACGAAACAGTTGAATTGACTACTGAATACGTATTGGATCAGGGCTTGAATTCCTCTCTACCAGCAAATATGAGCATTATTCTTACTCTTATAGGGCAGCTTGAGCATTTTTCAGTGCCATCATTTGCTGGTCACCGATATCTATGAGGTACCCTAGTTGCACAATTTATCTTCATCTGCTCCTTTTTCATGTGTTTCATTCATGATCGATGCTCCGGTGCTATTTGCTAGTGAATTATACTACCAGTAAAAATAATCTAAACTAGTATTTGTTATCAAGCATAAATTAGTAGTTTATTAATACCATTATTAGGGGTAACTTTATTATTTATGTTTGTTTTCCTTTTTAGATTAATACGACGTCATCCATTGTGTTGACATTGCTCATATTCCATCGAAAAAGCTAAAAAAAGAAAAAAAAAGTTTTAGTCACTGCTAAATGATGATTATACCCCTCCACACTTATTTCTTTTTGACAATAATATCCCTCCATATTTCTACTACTGTTAACTGGGATAGTAGTACAAATAAATCCGAACTCTTCGATCAATTGAAATTACCGGTTCATATTACTTTCTACTACTAATAGAAAGCATCATGGTGGGGCTATTCATTTATACTGTCTTGAAATTAACCCCTTTTTTTTTTCCAATTTGAAAAGAACACATTCTGTTCCAACTGATGTTCTTGCGATAATTTAGTTTCAGCGGCAGTTTTTATGAAATTATTCCCAAATTCTTGTAGGAAGAATGAAGCGAAAGCCTAACCTGATATGACGACGAGGACGTCCCAAAAATGAACCCCTTGGGGAAGCTCCTCCGGCTGATCGGCGGCAGCTCGCTGCCGCCATTGCAGGCGACGCAGGTAAAAGCTAAGAGGTGGAGAAGGAGAAGAGCACCTGACATCACCATTGCCCCTGCAACCGCCATGACCTACATAGACAGAAGAGAGTGATGGGCTGATGAACACAGACAGCTCAACTTAAATAGGGACTTGCATATCAGTTTGGACTTGTCGGCGGTGATGGGGTAGGACGTGGCCACGTGGGAGTACTAGTAATCAGGAAAAAAAACTGTTGTAGATGCTCGTGCTAAGGCCATTTTTAACCCAAGACACTAAACATAGTTTTAATAAACTTCATATCATC
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| CDS seq | ATGGCGGTTGCAGGGGCAATGGTGATGTCAGGTGCTCTTCTCCTTCTCCACCTCTTAGCTTTTACCTGCGTCGCCTGCAATGGCGGCAGCGAGCTGCCGCCGATCAGCCGGAGGAGCTTCCCCAAGGGGTTCATTTTTGGGACGTCCTCGTCGTCATATCAGTTCGAGGGTGGCGCAGTGTTGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTCTCCAGACAAAATCACTGACAGAAGCAATGGCGATGTGGCTTGCGACAGCTACCATCTCTACAAGGAAGATGTGCGCAGTATGAAGGAGATGGGGATGGATGCATACAGATTCTCCATCTCATGGTCAAGAATTCTTCCAAATGGAAGTCTGAGCGGTGGAGTCAACAGAGAAGGCATCAGCTACTACAACAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCATTTGTTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAAAGGGTTTCTTAGCCCTAATATCATAAATGACTATAAGGAATACGCTGAAACATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGACCTTCTGCTCTATGGGCTATGCATCTGGCATCATGGCACCAGGCCGGTGTTCATCCTGGGAGGCCCGACGCAGGAACTGCATCTTGCATGTTACTTATCGCGACTCCTCCCGGCAGGTGGCGGCGCGGCAAAAATTGCCGGCAGCGCTTTGTAATCTCTGTTTGGACCAGACAGCAATACTATGCAATGTGCGACTGGTTGCTTTCCAGCAGGCTTTACAAAAGGGGAAGATTGGAATAATTTTAAATGCAGACTGGTTTGTTCCATTGTCCCAATCCAAATCCAGCAGTGATGCTGCAAGACGTGCTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGGAATGGTCAAGGGTGCATTCGATTTCATTGGACTCAACTACTACACTTCAAGCTATGCTGATAATGATCCTCCATCGCATGGCCATAACAACAGCTATAATACTGATGCACATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTCACATCTACCCTGAAGGGATCTGTGAAATGTTGCTTTATGTTAAGGAGAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAGTCAATAATAAGACCATGCCGCTCGAGGAAGCCCTGAAGGATGATACCAGGATCGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAACGTGAAGGGGTACTTTGCATGGTCTCTGCTTGACAACTTTGAGTGGGCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTACGATGACGGAATGAAGAGATACCCCAAGAACTCGGCCCGTTGGTTCAAGAAGTTCCTCCAGAAATCAAACAGAGATGGAAACAAAAGGTTGAAAAGAGTTGCATACAATGCCTTTTCTAATTGA
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| Protein seq | MAVAGAMVMSGALLLLHLLAFTCVACNGGSELPPISRRSFPKGFIFGTSSSSYQFEGGAVLGGRGPSIWDTFTHQSPDKITDRSNGDVACDSYHLYKEDVRSMKEMGMDAYRFSISWSRILPNGSLSGGVNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEARRRNCILHVTYRDSSRQVAARQKLPAALCNLCLDQTAILCNVRLVAFQQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGNKRLKRVAYNAFSN |
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| Function | Beta-glucosidase 11 [UniProtKB/Swiss-Prot:Q7XKV5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39864 | LOC_Os04g39864.1 | Chr04 | 23735317 | 23742574 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTTGCAGGGGCAATGGTGATGTCAGGTGCTCTTCTCCTTCTCCACCTCTTAGCTTTTACCTGCGTCGCCTGCAATGGCGGCAGCGAGCTGCCGCCGATCAGCCGGAGGAGCTTCCCCAAGGGGTTCATTTTTGGGACGTCCTCGTCGTCATATCAGTTCGAGGGTGGCGCAGTGTTGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTCTCCAGACAAAATCACTGACAGAAGCAATGGCGATGTGGCTTGCGACAGCTACCATCTCTACAAGGAAGATGTGCGCAGTATGAAGGAGATGGGGATGGATGCATACAGATTCTCCATCTCATGGTCAAGAATTCTTCCAAATGGAAGTCTGAGCGGTGGAGTCAACAGAGAAGGCATCAGCTACTACAACAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCATTTGTTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAAAGGGTTTCTTAGCCCTAATATCATAAATGACTATAAGGAATACGCTGAAACATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGACCTTCTGCTCTATGGGCTATGCATCTGGCATCATGGCACCAGGCCGGTGTTCATCCTGGGAGGCCCGACGCAGGAACTGCATCTTGCATGTTACTTATCGCGACTCCTCCCGGCAGGTGGCGGCGCGGCAAAAATTGCCGGCAGCGCTTTGTAATCTCTGTTTGGACCAGACAGCAATACTATGCAATGTGCGACTGGTTGCTTTCCAGCAGGCTTTACAAAAGGGGAAGATTGGAATAATTTTAAATGCAGACTGGTTTGTTCCATTGTCCCAATCCAAATCCAGCAGTGATGCTGCAAGACGTGCTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGGAATGGTCAAGGGTGCATTCGATTTCATTGGACTCAACTACTACACTTCAAGCTATGCTGATAATGATCCTCCATCGCATGGCCATAACAACAGCTATAATACTGATGCACATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTCACATCTACCCTGAAGGGATCTGTGAAATGTTGCTTTATGTTAAGGAGAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAGTCAATAATAAGACCATGCCGCTCGAGGAAGCCCTGAAGGATGATACCAGGATCGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAACGTGAAGGGGTACTTTGCATGGTCTCTGCTTGACAACTTTGAGTGGGCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTACGATGACGGAATGAAGAGATACCCCAAGAACTCGGCCCGTTGGTTCAAGAAGTTCCTCCAGAAATCAAACAGAGATGGAAACAAAAGGTTGAAAAGAGTTGCATACAATGCCTTTTCTAATTGA
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| Protein seq | MAVAGAMVMSGALLLLHLLAFTCVACNGGSELPPISRRSFPKGFIFGTSSSSYQFEGGAVLGGRGPSIWDTFTHQSPDKITDRSNGDVACDSYHLYKEDVRSMKEMGMDAYRFSISWSRILPNGSLSGGVNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEARRRNCILHVTYRDSSRQVAARQKLPAALCNLCLDQTAILCNVRLVAFQQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGNKRLKRVAYNAFSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39864 | LOC_Os04g39864.2 | Chr04 | 23735317 | 23742382 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTTGCAGGGGCAATGGTGATGTCAGGTGCTCTTCTCCTTCTCCACCTCTTAGCTTTTACCTGCGTCGCCTGCAATGGCGGCAGCGAGCTGCCGCCGATCAGCCGGAGGAGCTTCCCCAAGGGGTTCATTTTTGGGACGTCCTCGTCGTCATATCAGTTCGAGGGTGGCGCAGTGTTGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTCTCCAGACAAAATCACTGACAGAAGCAATGGCGATGTGGCTTGCGACAGCTACCATCTCTACAAGGAAGATGTGCGCAGTATGAAGGAGATGGGGATGGATGCATACAGATTCTCCATCTCATGGTCAAGAATTCTTCCAAATGGAAGTCTGAGCGGTGGAGTCAACAGAGAAGGCATCAGCTACTACAACAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCATTTGTTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAAAGGGTTTCTTAGCCCTAATATCATAAATGACTATAAGGAATACGCTGAAACATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGACCTTCTGCTCTATGGGCTATGCATCTGGCATCATGGCACCAGGCCGGTGTTCATCCTGGGAGGCCCGACGCAGGAACTGCATCTTGCATGTTACTTATCGCGACTCCTCCCGGCAGGTGGCGGCGCGGCAAAAATTGCCGGCAGCGCTTTGTAATCTCTGTTTGGACCAGACAGCAATACTATGCAATGTGCGACTGGTTGCTTTCCAGCAGGCTTTACAAAAGGGGAAGATTGGAATAATTTTAAATGCAGACTGGTTTGTTCCATTGTCCCAATCCAAATCCAGCAGTGATGCTGCAAGACGTGCTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGGAATGGTCAAGGGTGCATTCGATTTCATTGGACTCAACTACTACACTTCAAGCTATGCTGATAATGATCCTCCATCGCATGGCCATAACAACAGCTATAATACTGATGCACATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTCACATCTACCCTGAAGGGATCTGTGAAATGTTGCTTTATGTTAAGGAGAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAGTCAATAATAAGACCATGCCGCTCGAGGAAGCCCTGAAGGATGATACCAGGATCGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAACGTGAAGGGGTACTTTGCATGGTCTCTGCTTGACAACTTTGAGTGGGCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTACGATGACGGAATGAAGAGATACCCCAAGAACTCGGCCCGTTGGTTCAAGAAGTTCCTCCAGAAATCAAACAGAGATGGAAACAAAAGGTTGAAAAGAGTTGCATACAATGCCTTTTCTAATTGA
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| Protein seq | MAVAGAMVMSGALLLLHLLAFTCVACNGGSELPPISRRSFPKGFIFGTSSSSYQFEGGAVLGGRGPSIWDTFTHQSPDKITDRSNGDVACDSYHLYKEDVRSMKEMGMDAYRFSISWSRILPNGSLSGGVNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEARRRNCILHVTYRDSSRQVAARQKLPAALCNLCLDQTAILCNVRLVAFQQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGNKRLKRVAYNAFSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39864 | LOC_Os04g39864.3 | Chr04 | 23735317 | 23742574 | - | MSU_osa1r7 | ||
| CDS seq | ATGAAGGAGATGGGGATGGATGCATACAGATTCTCCATCTCATGGTCAAGAATTCTTCCAAATGGAAGTCTGAGCGGTGGAGTCAACAGAGAAGGCATCAGCTACTACAACAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCATTTGTTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAAAGGGTTTCTTAGCCCTAATATCATAAATGACTATAAGGAATACGCTGAAACATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGACCTTCTGCTCTATGGGCTATGCATCTGGCATCATGGCACCAGGCCGGTGTTCATCCTGGGAGGCCCGACGCAGGAACTGCATCTTGCATGTTACTTATCGCGACTCCTCCCGGCAGGTGGCGGCGCGGCAAAAATTGCCGGCAGCGCTTTGTAATCTCTGTTTGGACCAGACAGCAATACTATGCAATGTGCGACTGGTTGCTTTCCAGCAGGCTTTACAAAAGGGGAAGATTGGAATAATTTTAAATGCAGACTGGTTTGTTCCATTGTCCCAATCCAAATCCAGCAGTGATGCTGCAAGACGTGCTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGGAATGGTCAAGGGTGCATTCGATTTCATTGGACTCAACTACTACACTTCAAGCTATGCTGATAATGATCCTCCATCGCATGGCCATAACAACAGCTATAATACTGATGCACATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTCACATCTACCCTGAAGGGATCTGTGAAATGTTGCTTTATGTTAAGGAGAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAGTCAATAATAAGACCATGCCGCTCGAGGAAGCCCTGAAGGATGATACCAGGATCGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAACGTGAAGGGGTACTTTGCATGGTCTCTGCTTGACAACTTTGAGTGGGCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTACGATGACGGAATGAAGAGATACCCCAAGAACTCGGCCCGTTGGTTCAAGAAGTTCCTCCAGAAATCAAACAGAGATGGAAACAAAAGGTTGAAAAGAGTTGCATACAATGCCTTTTCTAATTGA
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| Protein seq | MKEMGMDAYRFSISWSRILPNGSLSGGVNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEARRRNCILHVTYRDSSRQVAARQKLPAALCNLCLDQTAILCNVRLVAFQQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGNKRLKRVAYNAFSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g39864 | LOC_Os04g39864.4 | Chr04 | 23735319 | 23742356 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGTTGCAGGGGCAATGGTGATGTCAGGTGCTCTTCTCCTTCTCCACCTCTTAGCTTTTACCTGCGTCGCCTGCAATGGCGGCAGCGAGCTGCCGCCGATCAGCCGGAGGAGCTTCCCCAAGGGGTTCATTTTTGGGACGTCCTCGTCGTCATATCAGTTCGAGGGTGGCGCAGTGTTGGGTGGCAGAGGACCAAGCATCTGGGACACCTTCACACATCAGTCTCCAGACAAAATCACTGACAGAAGCAATGGCGATGTGGCTTGCGACAGCTACCATCTCTACAAGGAAGATGTGCGCAGTATGAAGGAGATGGGGATGGATGCATACAGATTCTCCATCTCATGGTCAAGAATTCTTCCAAATGGAAGTCTGAGCGGTGGAGTCAACAGAGAAGGCATCAGCTACTACAACAATTTGATCAATGAGCTATTATCGAAAGGGGTGCAACCATTTGTTACCCTTTTCCACTGGGACTCACCTCAGGCGTTGGAAGATAAATATAAAGGGTTTCTTAGCCCTAATATCATAAATGACTATAAGGAATACGCTGAAACATGCTTCAAAGAGTTTGGTGACCGGGTGAAACATTGGATCACCTTCAATGAGCCTTGGACCTTCTGCTCTATGGGCTATGCATCTGGCATCATGGCACCAGGCCGGTGTTCATCCTGGGAGGTGGGAAAATGCAGAGTTGGAGATTCAGGAAGGGAGCCTTACACTGCATGCCATCACCAACTACTTGCTCACGCAGAAACCGTTCGGTTGTACAAAGAGAAATATCAGGCTTTACAAAAGGGGAAGATTGGAATAATTTTAAATGCAGACTGGTTTGTTCCATTGTCCCAATCCAAATCCAGCAGTGATGCTGCAAGACGTGCTCTAGACTTCATGCTTGGATGGTTTATGGATCCTCTCATTAGAGGAGACTACCCACTAAGCATGAGAGAATTGGTTGGAAATCGCTTGCCAGAGTTCAGCAAAGAGCAATCTGGAATGGTCAAGGGTGCATTCGATTTCATTGGACTCAACTACTACACTTCAAGCTATGCTGATAATGATCCTCCATCGCATGGCCATAACAACAGCTATAATACTGATGCACATGCTAAGATTACTGGTAGTCGAAACGGGATTCCCATAGGGCCTCAGGCTGCTTCGTTTTGGTTTCACATCTACCCTGAAGGGATCTGTGAAATGTTGCTTTATGTTAAGGAGAACTATGGCAATCCTACCATCTACATCACTGAAAATGGTGTTGATGAAGTCAATAATAAGACCATGCCGCTCGAGGAAGCCCTGAAGGATGATACCAGGATCGAATACTATCACAAGCACCTTCTCGCCCTGCTAAGTGCTATGAGGGATGGAGCAAACGTGAAGGGGTACTTTGCATGGTCTCTGCTTGACAACTTTGAGTGGGCAGAGGGCTACACAGTTCGGTTTGGGATAAACTTTGTGGATTACGATGACGGAATGAAGAGATACCCCAAGAACTCGGCCCGTTGGTTCAAGAAGTTCCTCCAGAAATCAAACAGAGATGGAAACAAAAGGTTGAAAAGAGTTGCATACAATGCCTTTTCTAATTGA
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| Protein seq | MAVAGAMVMSGALLLLHLLAFTCVACNGGSELPPISRRSFPKGFIFGTSSSSYQFEGGAVLGGRGPSIWDTFTHQSPDKITDRSNGDVACDSYHLYKEDVRSMKEMGMDAYRFSISWSRILPNGSLSGGVNREGISYYNNLINELLSKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKEYAETCFKEFGDRVKHWITFNEPWTFCSMGYASGIMAPGRCSSWEVGKCRVGDSGREPYTACHHQLLAHAETVRLYKEKYQALQKGKIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYITENGVDEVNNKTMPLEEALKDDTRIEYYHKHLLALLSAMRDGANVKGYFAWSLLDNFEWAEGYTVRFGINFVDYDDGMKRYPKNSARWFKKFLQKSNRDGNKRLKRVAYNAFSN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0474800 | SBH | 6.729942 | 11.612279 | 2.541452 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g39840 | RBH | 0.026260 | 0.373745 | 0.516790 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0474500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0016860 | SBH | 0.580800 | 1204.014648 | 17.229502 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0017630 | RBH | 0.000000 | 2.980392 | 0.785118 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0017350 | SBH | 0.403977 | 4.460511 | 4.238048 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0017060 | SBH | 0.029187 | 0.036088 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0017310 | RBH | 2.662956 | 131.483566 | 73.363663 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0370300 | SBH | 34.2057305 | 25.1759225 | 6.9857765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0016090 | SBH | 0.073161 | 0.292588 | 0.478872 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0368700 | RBH | 5.4672165 | 0.1049895 | 0.7460665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0016660 | RBH | 0.757983 | 1.589064 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0016520 | SBH | 0.765130 | 123.291840 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0016530 | SBH | 0.754512 | 2.053615 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0017020 | SBH | 0.930369 | 0.861543 | 1.344414 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0017110 | SBH | 0.164023 | 5.571730 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G016340 | SBH | 0.170521 | 0.615946 | 1.179078 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0016370 | SBH | 6.220611 | 167.321060 | 29.707485 |
