Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0024950 | OGI:06027190 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:22942175-22949582 | ||||||||
| Gene Symbol | DLN55, OsDLN55, OsDLN55a, OsDLN55b, DLN55a, DLN55b, - | ||||||||||
| DNA seq | atggctgcaagaggagtgaagaggaaattgccatcccaagaacctaccctatccgcatccccctgttcggcatcgcccctcggctccggcaagctggtagaggcatcggccgatctggaatctagcgaggattccacccagtcctacctctctgacgctgcttccagagccactgcccaagaagatgtggagctcgtcactcgtgtgctgtcaagggtagctgcgaagtcacccgaagctatctgtcagttcgtccgccgcctgacgccggcgaaggttgcgcgctcgctggattgggacctgctcgagtccgacaggctaagaaaggtaactacggcagagattttggtttttcatctgtatttctgttggctcaacttgtgtgcgtagatggccggcggagggcactgtcactggagcgaggatgaactgttggcgttcctccagagttgcttggaggaaatcgcagcgcgcaacatcacgtcgtcctgccccaaaactctggggtatgccaacttgcaggccaagatgctggcgaaggtagggaagcatgtgaccaaggcccaggtgaagaatttctagggctcttgccgccgccgatttgttacctggacatggctggaatcaatggcaactgggctaggaaggaacccctacactggcagcatcgacgctagcccagagtggtgggaagcaatggaagcggttagttgtcagattccctcaattttttttgtagttacaactcattttctagttagatagaaaacctatgattagctctagttggcaacaaattttcagacatcacacatcttgtttaagaaaacataggattagctatagttggcaacaaactttctgacatcctgttcctctgaaacgtacaattatccttacaaaattacaagcattataatattcaggatttacacagtttgtttcatccctaaccttatgcaatattaaaatatatgagatgggcaatttccggtgatcaccgtaattgtaacgccggcaccgccggggggttgggacttctcccccggtgatgcaattcgggaggaagttcgtcttcgtttttgttctccggtgcatttctcttcgaagttctgccctacgcacttccggttagttgttgatctcccgagagccaatttccggctaacaaattcttctgtggctttgcctttaagagccgccattggtggttctcctgcggatcttaatgtccaacatttgttagaccggagtttctcttttgatgttttctctaagcaagttggtttatggatttatcgtcttagatctttttcctgtgatgattttgcccttcgtttttatgtatggagaaatgggggtcctaattagcagagggaatttgagtcttggagccgtgattgtgccgaggagtggacattggtctcttctaagaagaggttggtgcacagcagttctaaggttcagaaaggcaaatcctatgcccaagctgttcagcaaagagatatctcggttaaatcggtgtttcaacgtttaaaggcccctctccaagagagaagatcggtttttacgagacttgaagggttgaaggttcctatcgccggtgaaactccggcgaccaagacggtggagcaaatcacggagggagatcctatttctgtgcgtaacttgaattcaaatttcatacctttctgtacacattgtttggataagggccatattgcttctgattgctctgagcctattcagtgccattcttgcctggaggctggtcatatagcccgtttctgtaccactaggcccgctaaggcccatcaacctgtgggaaagtttccgaaacagagttctcggaataacttagtttggagagctaaatcttctctggccaaaaagacgacggtttctccccgtatcccttcctctcccaggaacaatgttcaatctaatccccagaatttcccctcgctcgcaatggctgatctcaaccctaacccgcaacgttttcttcgtcaaggccaagtggttcatcaaggtggtaacttgcgtgtgccgcgtgttgatctcaccatcccgcagcgtccgccccgacgtcatgaggatgtctgcatcgcaattgtggagccggccatccctgagcatgaatgggatcattaccgggcgcttatctcggatcacatttttgaagtacacatgtatgaggttcgtactgcttaccgtcacccttcggcagttggtatgttccagcttcgttcggtcatgcatagagatgccttggtaaactctccccctgctgcatatgatgggatgcatactgttgagtttgtgaagcatgaccaagggccaaactggcgtgcctgtcactttaatcgggagggctggtttcttctcttggatttcccactagattttgttgatcgtcaccatataaatctagcggtagcttcttttggacagctttctttttggcttgatagggaccagatgttgggtagagtgtttgtgagagcaaagtatagagatcttgactcggtcccccggaaaatagtgttacaggatcctttgggaatggtggtggaggtgaatcatggactatttctgtttttgtactggatggggattttgttgacattccacctgaagaagatttacctcctgctggtccacagcctaggcctaatgatgataatgctgaggaccccgatgatggaaatatttggcaactgggacatcctggtaatcagggggagggggtgcttgggatgatcttgtacaacagcaacaggctgcggaagcggaaatagaagatgcttggggtcaggatcacccaatgggccaggttgaagaaaacccgggacaattgattatcttgcctaatcaagaggagcaggagcttaatctgtttgaacaggagcaacaagttcagctgtttctggccaggctcaaggatatagctgacagggaaggaccaaagcacccatctttttatcctatggcaggattgctggagaaaattgatcatctgtgcaaagctaaggaaattatgcaggcagctcaaattcctagccccacatctctgccatacagctctcctttcatgacccttgtactccctaaaaggaaggcaatatttgatcatgctcctcctgcagtaaaaagagcacattccagttgggctttattgccttccccctctgaagatgggctttctgatcaggagattttggatgttgtacctttgcaagcccagccatcaagtccagaagtcaccccagcagtgcttcagattcctatggctcctgtcaaaaaaagggatgggaagactattctgtataatcctgctagaagacagagctctaggcttcttaattccaaccaagagctcaaattcgatcatcgaatgggaataggcaaaccaaggggaaagtcagctaaaaactgaaggagttggcaggtatataaaaaattcttatccctggcagtaaaattactgaatctgatttcaatgttgtggaagatgagataaactcagattcttccccttctgattgttcattatctttgttgcaaaagatgggggtggatctatgtggtctgaatcctgaggaggtggctgagtcaagcttagggggagaaaaaaggaagaagcttccccggccaaatatggatgattaggaatgaataatgtttctatgctcagagcaggatcttttgtttttcagtactgtaggactgtcatcagtgttagttctttttgtgtttgctgggaacttattttatatagctctatgcaggctaatttagttagctttgtatctatatgcactcctgaatgttttcaacatgaataatgtgtttaaatcctggaatgtgctgtgctggaacataagaggcatgaatgctgtacaaaattgttgtctttgaggcaaaagataaaggaaagtggttgtcaggttttctgtgtccaagagaccaaaaaacaaaatttctctttggctgatattaggacttttgctcctaagcgctttgatgtgtttgctttctcgccctcaagaggtgcttcaggtggtatattagtggtttgggcctctaaagtgtttttgggaaccccaggggaaataaatagtttttctgttatagtaaactttgtttcaaggcaatttttagaagcttgggccttaacctgcatatatggcccgtgtagtggcccagaacatacagagtttgtcagttggctgaaaaatatctcctttgggtcaatggaaaacatgatttttctaggggattttaatttctaccgatcggttgaggacagaaataagccgggagccgacatgaatgatatattcatttttaatgatgtaattagctctcttggtttgctagaaatccctttaaaagggagaagttttacatggagcaatatgcagaacagtcctcttctggagcggcttgattgggtatttacaagtccagcttggactttggttttcccaaacactactgtccacccattgactagaaatatatcagatcctggaaattctgaagcaaatgcgaagagatgcctccccagggccagatggtctcaatgttgcattttatagagctgcctggaattggataaaagacgatgttactgccatggtaggctcgttctatgaaacaggtaagcttcaatcaggtatgaatgctactaatattgttcttgttcctaaaaattctaatcctaagtcccctgctgattttagacccattagcctttgtaatgtttcttataaaatcattgctaagtccttggctaattacattcagaataaacttcctaaccttatttgtaacactcagcaagcttttgtcaaggggagacgcatctctaataatattgtgcttgctcaggaaattgctcactcttttaatctcacctcttttaatcaaaaagcttttcttttaaaaatagacttgtctaaagcttttgacaggattgaatggagattcatagcggacgctctttgtcgtaaagggtttcatgctaatttcgttcgtcttgttctttcctgcatcaactccgctaatttttctattgttataaatggtcaatcgtacgggtacttttcagctcatcgaggtattcgtcaaggttgtcctttatcgccttatctttttgtccttgcgattaatgaactttctgaccagcttgcagatgcaattcaaaggaaccacatttcaggaataaagttaggacaaaatggtccttccattcattctctgatgtttgcagatgatctaatcattgtgaggcaggcccaacaagaggaagtcaggaaaacctctgaaataatcaattccttttgtctcagatcaggccagactccaaattggggcaaatcttccatcctgttcagcaaaaatactcctgaagaggtaagacaaaatattcttacaatttttcctgtttctcttatgaactccagcacaaagcatctagggcatcctcttctggtgagtacaaaagacagaaatgctgcctacagtttcattgtcgacaagtttaaaagcaagcttactacttacaaagctaattctctttctcatgcaggtaggcttgccctcattaaatctgtctttgcttccattcctatttattacatgtccatcatgcttttctcaaaaaaattgattgctaaactaactgctattataaggaaattttggtggacaggaattcaagcagatggtggcaaaaaaggaatggctcttaggtcttggaaagacatttgcaaacctgtttctgagggaggcttgggcataagagatttgatggctgtaaataaaagtatccttgtccaatctgcctggagaattcttactaatccaaatgatcttctatcctctgtcctaaaatcaaaatattttccaaacacttccttttggaaggctagaacagatatgccaaaatctgctttctggtcttctattcttcaggtaagggatgtcttggaggaagcttcagtgtggcaactttctaaaggtgatatttctatttggagccaaccctggtgctctatttggaaaaacattcatgatcatcttaatcttgataatcttccttttcacatgcctgataaggtttctgatccttgggatgagaataagaattgggatgctcagcaaataactcaaatttttgatagtgcagctcaacattcaattatgcaggttcagattatgcagggagaggaggaagataggctttgctggaagtacacaccctcaggagtctgttcagccaagagtgcttacaagacaatttataatgaaatgtaccccaatcaaaatcaggtcagtaatttaacaaaaaatcttttgaaattaatctggaaacacaggtacatgcctcccagagtcaaaacttttggatggaggctgctgagtaatgctctcccaactgctcaaagaatgcaccacaggatcaaaaccgttagtcccaattgtcagacctgtggtcaaagggaggatgacttgcatctcttctttctctgtaatttcagtcgtttatgttggttcgtctctgactttaatctcaaagctgataatctttcttctctaggctctgttcaagatattattgcctatctttcagctaatggcatcaatatatacaatcttttaattatgctttggcaggtttggaaagcaaggaatgatatcaacttcaaaacaaagatttgggagccacaacaagtctgcaatgctgcgcaggcaatggcaaagacatatgaaagtgttcatcaaatggaagaagacagttgccaagacttcaatcgggctgaggagaataatataagaaattctgttgttaaaattcctgcaggaacaagagtttatgtggatgcctcttggaaggaagagaaaacaggagtagggatcttcatccacaaccctagcaatcacaatgctattgtcatcaaagctcaaagtctcaatgcaggaactcctttgctagcagaagctgaaggattatttttagctatgcaaattgctcgtcatcttcagctgcaagaccctatttttctctcagataacagtgagatagtgaatgctgtgcagaacgaggactacatacaaaaccccggacattggtctctgagaccaattctttcaagaattaaaaattttctgcaggatcaacaagttcgaatcatttggatctctagagagctcaacaaagttgcagatggccttgcaaagtcagcaagacaagctcagactaacagctgcttagcttttgattgctctaatatttctcacatttgttccagagatgtttgtcctactaaaagagctctttccttcactcctaatggagcagttaatgtaactcatgctttgtgtttctaaaacgctttct
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| CDS seq | atggctgcaagaggagtgaagaggaaattgccatcccaagaacctaccctatccgcatccccctgttcggcatcgcccctcggctccggcaagctggtagaggcatcggccgatctggaatctagcgaggattccacccagtcctacctctctgacgctgcttccagagccactgcccaagaagatgtggagctcgtcactcgtgtgctgtcaagggtagctgcgaagtcacccgaagctatctgtcagttcgtccgccgcctgacgccggcgaaggttgcgcgctcgctggattgggacctgctcgagtccgacaggctaagaaagatggccggcggagggcactgtcactggagcgaggatgaactgttggcgttcctccagagttgcttggaggaaatcgcagcgcgcaacatcacgtcgtcctgccccaaaactctggggtatgccaacttgcaggccaagatgctggcgaaggtagggaagcatgtgaccaaggcccagggctcttgccgccgccgatttgttacctggacatggctggaatcaatggcaactgggctaggaaggaacccctacactggcagcatcgacgctagcccagagtggtgggaagcaatggaagcggatttacacaatgggcaatttccggtgatcaccgtaattgtaacgccggcaccgccggggggttgggacttctcccccggtgatgcaattcgggaggaagttcgtcttcgtttttgttctccggcccctctccaagagagaagatcggtttttacgagacttgaagggttgaaggttcctatcgccggtgaaactccggcgaccaagacggtggagcaaatcacggagggagatcctatttctgtgcgtaacttgaattcaaatttcatacctttctgtacacattgtttggataagggccatattgcttctgattgctctgagcctattcagtgccattcttgcctggaggctggtcatatagcccgtttctgtaccactaggcccgctaaggcccatcaacctgtgggaaagtttccgaaacagagttctcggaataacttagtttggagagctaaatcttctctggccaaaaagacgacggtttctccccgtatcccttcctctcccaggaacaatgttcaatctaatccccagaatttcccctcgctcgcaatggctgatctcaaccctaacccgcaacgttttcttcgtcaaggccaagtggttcatcaaggtggtaacttgcgtgtgccgcgtgttgatctcaccatcccgcagcgtccgccccgacgtcatgaggatgtctgcatcgcaattgtggagccggccatccctgagcatgaatgggatcattaccgggcgcttatctcggatcacatttttgaagtacacatgtatgaggttcgtactgcttaccgtcacccttcggcagttggtatgttccagcttcgttcggtcatgcatagagatgccttggtaaactctccccctgctgcatatgatgggatgcatactgttgagtttgtgaagcatgaccaagggccaaactggcgtgcctgtcactttaatcgggagggctggtttcttctcttggatttcccactagattttgttgatcgtcaccatataaatctagcggtagcttcttttggacagctttctttttggcttgatagggaccagatgttgggtagagtgtttgtgagagcaaagtatagagatcttgactcggtcccccggaaaatagtgttacaggatcctttgggaatggatcacccaatgggccaggttgaagaaaacccgggacaattgattatcttgcctaatcaagaggagcaggagcttaatctgtttgaacaggagcaacaagttcagctgtttctggccaggctcaaggatatagctgacagggaaggaccaaagcacccatctttttatcctatggcaggattgctggagaaaattgatcatctgtgcaaagctaaggaaattatgcaggcagctcaaattcctagccccacatctctgccatacagctctcctttcatgacccttgtactccctaaaaggaaggcaatatttgatcatgctcctcctgcagtaaaaagagcacattccagttgggctttattgccttccccctctgaagatgggctttctgatcaggagattttggatgttgtacctttgcaagcccagccatcaagtccagaagtcaccccagcagtgcttcagattcctatggctcctgtcaaaaaaagggatgggaagactattctgtacatgcctcccagagtcaaaacttttggatggaggctgctgagtaatgctctcccaactgctcaaagaatgcaccacaggatcaaaaccgttagtcccaattgtcagacctgtggtcaaagggaggatgacttgcatctcttctttctctgtaatttcagtcgaacaagagtttatgtggatgcctcttggaaggaagagaaaacaggagtagggatcttcatccacaaccctagcaatcacaatgctattgtcatcaaagctcaaagtctcaatgcaggaactcctttgctagcagaagctgaaggattatttttagctatgcaaattgctcgtcatcttcagctgcaagaccctatttttctctcagataacagtgagatagtgaatgctgtgcagaacgaggactacatacaaaaccccggacattggtctctgagaccaattctttcaagaattaaaaattttctgcaggatcaacaagttcgaatcatttggatctctagagagctcaacaaagttgcagatggccttgcaaagtcagcaagacaagctcagactaacagctgcttagcttttgattgctctaatatttctcacatttgttccagagatgtttgtcctactaaaagagctctttccttcactcctaatggagcagttaatgtaactcatgctttgtgtttctaa
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| Protein seq | MAARGVKRKLPSQEPTLSASPCSASPLGSGKLVEASADLESSEDSTQSYLSDAASRATAQEDVELVTRVLSRVAAKSPEAICQFVRRLTPAKVARSLDWDLLESDRLRKMAGGGHCHWSEDELLAFLQSCLEEIAARNITSSCPKTLGYANLQAKMLAKVGKHVTKAQGSCRRRFVTWTWLESMATGLGRNPYTGSIDASPEWWEAMEADLHNGQFPVITVIVTPAPPGGWDFSPGDAIREEVRLRFCSPAPLQERRSVFTRLEGLKVPIAGETPATKTVEQITEGDPISVRNLNSNFIPFCTHCLDKGHIASDCSEPIQCHSCLEAGHIARFCTTRPAKAHQPVGKFPKQSSRNNLVWRAKSSLAKKTTVSPRIPSSPRNNVQSNPQNFPSLAMADLNPNPQRFLRQGQVVHQGGNLRVPRVDLTIPQRPPRRHEDVCIAIVEPAIPEHEWDHYRALISDHIFEVHMYEVRTAYRHPSAVGMFQLRSVMHRDALVNSPPAAYDGMHTVEFVKHDQGPNWRACHFNREGWFLLLDFPLDFVDRHHINLAVASFGQLSFWLDRDQMLGRVFVRAKYRDLDSVPRKIVLQDPLGMDHPMGQVEENPGQLIILPNQEEQELNLFEQEQQVQLFLARLKDIADREGPKHPSFYPMAGLLEKIDHLCKAKEIMQAAQIPSPTSLPYSSPFMTLVLPKRKAIFDHAPPAVKRAHSSWALLPSPSEDGLSDQEILDVVPLQAQPSSPEVTPAVLQIPMAPVKKRDGKTILYMPPRVKTFGWRLLSNALPTAQRMHHRIKTVSPNCQTCGQREDDLHLFFLCNFSRTRVYVDASWKEEKTGVGIFIHNPSNHNAIVIKAQSLNAGTPLLAEAEGLFLAMQIARHLQLQDPIFLSDNSEIVNAVQNEDYIQNPGHWSLRPILSRIKNFLQDQQVRIIWISRELNKVADGLAKSARQAQTNSCLAFDCSNISHICSRDVCPTKRALSFTPNGAVNVTHALCF |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0024950 | OsCMeo_03g0024950.01 | Chr03 | 22942175 | 22949582 | + | NAM | ||
| CDS seq | atggctgcaagaggagtgaagaggaaattgccatcccaagaacctaccctatccgcatccccctgttcggcatcgcccctcggctccggcaagctggtagaggcatcggccgatctggaatctagcgaggattccacccagtcctacctctctgacgctgcttccagagccactgcccaagaagatgtggagctcgtcactcgtgtgctgtcaagggtagctgcgaagtcacccgaagctatctgtcagttcgtccgccgcctgacgccggcgaaggttgcgcgctcgctggattgggacctgctcgagtccgacaggctaagaaagatggccggcggagggcactgtcactggagcgaggatgaactgttggcgttcctccagagttgcttggaggaaatcgcagcgcgcaacatcacgtcgtcctgccccaaaactctggggtatgccaacttgcaggccaagatgctggcgaaggtagggaagcatgtgaccaaggcccagggctcttgccgccgccgatttgttacctggacatggctggaatcaatggcaactgggctaggaaggaacccctacactggcagcatcgacgctagcccagagtggtgggaagcaatggaagcggatttacacaatgggcaatttccggtgatcaccgtaattgtaacgccggcaccgccggggggttgggacttctcccccggtgatgcaattcgggaggaagttcgtcttcgtttttgttctccggcccctctccaagagagaagatcggtttttacgagacttgaagggttgaaggttcctatcgccggtgaaactccggcgaccaagacggtggagcaaatcacggagggagatcctatttctgtgcgtaacttgaattcaaatttcatacctttctgtacacattgtttggataagggccatattgcttctgattgctctgagcctattcagtgccattcttgcctggaggctggtcatatagcccgtttctgtaccactaggcccgctaaggcccatcaacctgtgggaaagtttccgaaacagagttctcggaataacttagtttggagagctaaatcttctctggccaaaaagacgacggtttctccccgtatcccttcctctcccaggaacaatgttcaatctaatccccagaatttcccctcgctcgcaatggctgatctcaaccctaacccgcaacgttttcttcgtcaaggccaagtggttcatcaaggtggtaacttgcgtgtgccgcgtgttgatctcaccatcccgcagcgtccgccccgacgtcatgaggatgtctgcatcgcaattgtggagccggccatccctgagcatgaatgggatcattaccgggcgcttatctcggatcacatttttgaagtacacatgtatgaggttcgtactgcttaccgtcacccttcggcagttggtatgttccagcttcgttcggtcatgcatagagatgccttggtaaactctccccctgctgcatatgatgggatgcatactgttgagtttgtgaagcatgaccaagggccaaactggcgtgcctgtcactttaatcgggagggctggtttcttctcttggatttcccactagattttgttgatcgtcaccatataaatctagcggtagcttcttttggacagctttctttttggcttgatagggaccagatgttgggtagagtgtttgtgagagcaaagtatagagatcttgactcggtcccccggaaaatagtgttacaggatcctttgggaatggatcacccaatgggccaggttgaagaaaacccgggacaattgattatcttgcctaatcaagaggagcaggagcttaatctgtttgaacaggagcaacaagttcagctgtttctggccaggctcaaggatatagctgacagggaaggaccaaagcacccatctttttatcctatggcaggattgctggagaaaattgatcatctgtgcaaagctaaggaaattatgcaggcagctcaaattcctagccccacatctctgccatacagctctcctttcatgacccttgtactccctaaaaggaaggcaatatttgatcatgctcctcctgcagtaaaaagagcacattccagttgggctttattgccttccccctctgaagatgggctttctgatcaggagattttggatgttgtacctttgcaagcccagccatcaagtccagaagtcaccccagcagtgcttcagattcctatggctcctgtcaaaaaaagggatgggaagactattctgtacatgcctcccagagtcaaaacttttggatggaggctgctgagtaatgctctcccaactgctcaaagaatgcaccacaggatcaaaaccgttagtcccaattgtcagacctgtggtcaaagggaggatgacttgcatctcttctttctctgtaatttcagtcgaacaagagtttatgtggatgcctcttggaaggaagagaaaacaggagtagggatcttcatccacaaccctagcaatcacaatgctattgtcatcaaagctcaaagtctcaatgcaggaactcctttgctagcagaagctgaaggattatttttagctatgcaaattgctcgtcatcttcagctgcaagaccctatttttctctcagataacagtgagatagtgaatgctgtgcagaacgaggactacatacaaaaccccggacattggtctctgagaccaattctttcaagaattaaaaattttctgcaggatcaacaagttcgaatcatttggatctctagagagctcaacaaagttgcagatggccttgcaaagtcagcaagacaagctcagactaacagctgcttagcttttgattgctctaatatttctcacatttgttccagagatgtttgtcctactaaaagagctctttccttcactcctaatggagcagttaatgtaactcatgctttgtgtttctaa
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| Protein seq | MAARGVKRKLPSQEPTLSASPCSASPLGSGKLVEASADLESSEDSTQSYLSDAASRATAQEDVELVTRVLSRVAAKSPEAICQFVRRLTPAKVARSLDWDLLESDRLRKMAGGGHCHWSEDELLAFLQSCLEEIAARNITSSCPKTLGYANLQAKMLAKVGKHVTKAQGSCRRRFVTWTWLESMATGLGRNPYTGSIDASPEWWEAMEADLHNGQFPVITVIVTPAPPGGWDFSPGDAIREEVRLRFCSPAPLQERRSVFTRLEGLKVPIAGETPATKTVEQITEGDPISVRNLNSNFIPFCTHCLDKGHIASDCSEPIQCHSCLEAGHIARFCTTRPAKAHQPVGKFPKQSSRNNLVWRAKSSLAKKTTVSPRIPSSPRNNVQSNPQNFPSLAMADLNPNPQRFLRQGQVVHQGGNLRVPRVDLTIPQRPPRRHEDVCIAIVEPAIPEHEWDHYRALISDHIFEVHMYEVRTAYRHPSAVGMFQLRSVMHRDALVNSPPAAYDGMHTVEFVKHDQGPNWRACHFNREGWFLLLDFPLDFVDRHHINLAVASFGQLSFWLDRDQMLGRVFVRAKYRDLDSVPRKIVLQDPLGMDHPMGQVEENPGQLIILPNQEEQELNLFEQEQQVQLFLARLKDIADREGPKHPSFYPMAGLLEKIDHLCKAKEIMQAAQIPSPTSLPYSSPFMTLVLPKRKAIFDHAPPAVKRAHSSWALLPSPSEDGLSDQEILDVVPLQAQPSSPEVTPAVLQIPMAPVKKRDGKTILYMPPRVKTFGWRLLSNALPTAQRMHHRIKTVSPNCQTCGQREDDLHLFFLCNFSRTRVYVDASWKEEKTGVGIFIHNPSNHNAIVIKAQSLNAGTPLLAEAEGLFLAMQIARHLQLQDPIFLSDNSEIVNAVQNEDYIQNPGHWSLRPILSRIKNFLQDQQVRIIWISRELNKVADGLAKSARQAQTNSCLAFDCSNISHICSRDVCPTKRALSFTPNGAVNVTHALCF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0024950 | OsCMeo_03g0024950.02 | Chr03 | 22942183 | 22946037 | + | IsoSeq | ||
| CDS seq | atgttcaatctaatccccagaatttcccctcgctcgcaatggctgatctcaaccctaacccgcaacgttttcttcgtcaaggccaagtggttcatcaaggtggtaacttgcgtgtgccgcgtgttgatctcaccatcccgcagcgtccgccccgacgtcatgaggatgtctgcatcgcaattgtggagccggccatccctgagcatgaatgggatcattaccgggcgcttatctcggatcacatttttgaagtacacatgtatgaggttcgtactgcttaccgtcacccttcggcagttggtatgttccagcttcgttcggtcatgcatagagatgcct
More
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| Protein seq | MFNLIPRISPRSQWLISTLTRNVFFVKAKWFIKVVTCVCRVLISPSRSVRPDVMRMSASQLWSRPSLSMNGIITGRLSRITFLKYTCMRFVLLTVTLRQLVCSSFVRSCIEMP |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.963561 | 4.127228 | 25.715715 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0820700 | SBH | 0.524015 | 0.419175 | 2.313111 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g38375 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0820700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0004110 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0004030 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0015740 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0024980 | SBH | 0.255960 | 0.076444 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0015050 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0422700 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0018080 | RBH | 0.0 | 0.0 | 0.762598 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0381400 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0023610 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0024790 | SBH | 0.612962 | 5.274023 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0015260 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0023540 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0023420 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G023440 | SBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0024570 | RBH | 0.0 | 0.0 | 0.0 |
