Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_03g0018530 | OGI:03037950 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr03:14500633-14503307 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgaagtacaggaaggggggcaacgcccccgccaccgagcccgacgacgacgccacgacgaaaggaggtcacgacgtgccgccgagcatcaaggtggacatcggtgagtaccatggaggaggtatcgggaacggggacggtggctcggcctcgctcttcgagccgcggccggaggagacaccggtgagccggaggaacgatcgcggcggcggcggcggcgggcgcgagccgccggagaagcggctcacgctgttcgctctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggaagctagacttcgtgtgggcgacggtggtgctcctcggcggcttcgcgagcgcgctcagcaccaccgacttctggtgcgtcaccgtcatcctcgttggctccggggcgcgcgtcttcggccgcagccacgagctggagtggcagcaccgctctacgctcacctcctccaccgccggtggcgcgctgcgctccacctcccgccgcttgctccgcagcctcgggcactctcccgccgccaacccgaccgacgacggcggcgcccgtggcagtgcgaccgagacgcagttccagcaccagatcgtcgctcgcacgaagcagcgcgtttggcacgtgcccgacgtgtcgctactcccctacaccggcaggttgttcgtctccaagaacatcgggaggctcttcagctggctgcaggtgctctccgccttggcctgcgtcgcgctctcggtgatgcgcctatggcggcacgacttcggcggcgaccagcccaacaagcggccggcgctactgctgttctacacgttggcgttgatcgaggcgctcatcttcctgctcgagcaggcgtactgggtatggatgttctcccggcagaatctgatcaagacggtgagcgacgactgcaagctcggagagtactacggccccgactcgctcaagcgcttcttcttcgacgcctactcccgctgcatcacggggagcatcttcgacggcaccaagatggacctcgtcaccttcgccgaggagctcatcctgtcagagttcctcggcaatcagctcatcggcgtgcgcatcctgcagcagttcaccaccgagggctcatcggccaacgccggggaatccaatctcaacacgctgcgcaacgttggcacgaacgctcgctccatcgagcggctcgtggagatgatcaactggaagagccccggggaggaggaggtgcgccggtgcgcggccgaggtgttgtccaagctcgccgacaagagccggaacgcgctccgcgtgtccggcatccctggcgccatcgagtccgtcatgtccctgctctacaccgacgagagcgcgccggactccgcggcgccacacgacgtctcgccggcggcgcggagctacgatcaccagcagttcaaactgctcggcctgctcatcctcaagaggatcgccagggaccacgacaactgcggcaagattgggaacacccgcggcctcctctccaagatcatcgagctcacggacgcgtcgccggagctgctccacaacacgcgggcgccggagtcgccggttcgcatcgtgaggcgcgcgctcaaggtcgtcaagattctggtgtccgcgacgagcagcaccggcaagatgctccggcaggaagtcgccgataacgtgttcacggtgagcaacctgcgcggcgtcctgcagcacgggcagcagcacacggctctgcagaagctggccacggaaatactgtcgcacctggccatggacgccaagggcaagcaggtgatcgtgggcaccggtggggtggtcaagctgctgctgtcgatattcgtcaacggcgagaaggagctcggcgcggaggccggcgaggcgctggcgatgctggcgctggagagccaggcgagctgcgcggcgatcctcaaacaggatgacgtgctcgaccacctcatgtcggcgctggagggcgacggcgggccgcgtcgcctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcggcggcgcctctccacggtgaccaaagcgatgcctacggtatacatgtgtctaatatatttacacaagaacctttcttgagtcgtgagtcgtgacgtaattttgatttgattgttaattactatacactacatgttttgtatgatgacttgttgctgaaggtactgaaggccaccatgacggggagcgagaggaccctcgaggtgttcgtcggcctgacggtgcagatctgcaagttcatcgacggcgttcggttcgccggcgagctgtgcggcgccggcatcgacgagagaagctacgtggagcggctggcgagcatcctgcgggagcaccggtacccggacatcacggtgccccggatgcggcggttcgtggtgcagcaggccatctggctcatgacctcgtcctccgccgccgccgcctccgccgccgctggcgcagactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgcgttctccggcagcgtgggcatcagcaagcaccgggagagcttctccgccgccgtggacgccgcactcgagctgctcggcggcgatggagctcgagctgaggcctga
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| CDS seq | atgaagtacaggaaggggggcaacgcccccgccaccgagcccgacgacgacgccacgacgaaaggaggtcacgacgtgccgccgagcatcaaggtggacatcggtgagtaccatggaggaggtatcgggaacggggacggtggctcggcctcgctcttcgagccgcggccggaggagacaccggtgagccggaggaacgatcgcggcggcggcggcggcgggcgcgagccgccggagaagcggctcacgctgttcgctctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggaagctagacttcgtgtgggcgacggtggtgctcctcggcggcttcgcgagcgcgctcagcaccaccgacttctggtgcgtcaccgtcatcctcgttggctccggggcgcgcgtcttcggccgcagccacgagctggagtggcagcaccgctctacgctcacctcctccaccgccggtggcgcgctgcgctccacctcccgccgcttgctccgcagcctcgggcactctcccgccgccaacccgaccgacgacggcggcgcccgtggcagtgcgaccgagacgcagttccagcaccagatcgtcgctcgcacgaagcagcgcgtttggcacgtgcccgacgtgtcgctactcccctacaccggcaggttgttcgtctccaagaacatcgggaggctcttcagctggctgcaggtgctctccgccttggcctgcgtcgcgctctcggtgatgcgcctatggcggcacgacttcggcggcgaccagcccaacaagcggccggcgctactgctgttctacacgttggcgttgatcgaggcgctcatcttcctgctcgagcaggcgtactgggtatggatgttctcccggcagaatctgatcaagacggtgagcgacgactgcaagctcggagagtactacggccccgactcgctcaagcgcttcttcttcgacgcctactcccgctgcatcacggggagcatcttcgacggcaccaagatggacctcgtcaccttcgccgaggagctcatcctgtcagagttcctcggcaatcagctcatcggcgtgcgcatcctgcagcagttcaccaccgagggctcatcggccaacgccggggaatccaatctcaacacgctgcgcaacgttggcacgaacgctcgctccatcgagcggctcgtggagatgatcaactggaagagccccggggaggaggaggtgcgccggtgcgcggccgaggtgttgtccaagctcgccgacaagagccggaacgcgctccgcgtgtccggcatccctggcgccatcgagtccgtcatgtccctgctctacaccgacgagagcgcgccggactccgcggcgccacacgacgtctcgccggcggcgcggagctacgatcaccagcagttcaaactgctcggcctgctcatcctcaagaggatcgccagggaccacgacaactgcggcaagattgggaacacccgcggcctcctctccaagatcatcgagctcacggacgcgtcgccggagctgctccacaacacgcgggcgccggagtcgccggttcgcatcgtgaggcgcgcgctcaaggtcgtcaagattctggtgtccgcgacgagcagcaccggcaagatgctccggcaggaagtcgccgataacgtgttcacggtgagcaacctgcgcggcgtcctgcagcacgggcagcagcacacggctctgcagaagctggccacggaaatactgtcgcacctggccatggacgccaagggcaagcaggtgatcgtgggcaccggtggggtggtcaagctgctgctgtcgatattcgtcaacggcgagaaggagctcggcgcggaggccggcgaggcgctggcgatgctggcgctggagagccaggcgagctgcgcggcgatcctcaaacaggatgacgtgctcgaccacctcatgtcggcgctggagggcgacggcgggccgcgtcgcctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcggcggcgcctctccacggtgaccaaagcgatgcctacggtactgaaggccaccatgacggggagcgagaggaccctcgaggtgttcgtcggcctgacggtgcagatctgcaagttcatcgacggcgttcggttcgccggcgagctgtgcggcgccggcatcgacgagagaagctacgtggagcggctggcgagcatcctgcgggagcaccggtacccggacatcacggtgccccggatgcggcggttcgtggtgcagcaggccatctggctcatgacctcgtcctccgccgccgccgcctccgccgccgctggcgcagactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgcgttctccggcagcgtgggcatcagcaagcaccgggagagcttctccgccgccgtggacgccgcactcgagctgctcggcggcgatggagctcgagctgaggcctga
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| Protein seq | MKYRKGGNAPATEPDDDATTKGGHDVPPSIKVDIGEYHGGGIGNGDGGSASLFEPRPEETPVSRRNDRGGGGGGREPPEKRLTLFALRLAVLEKAASGLGKLDFVWATVVLLGGFASALSTTDFWCVTVILVGSGARVFGRSHELEWQHRSTLTSSTAGGALRSTSRRLLRSLGHSPAANPTDDGGARGSATETQFQHQIVARTKQRVWHVPDVSLLPYTGRLFVSKNIGRLFSWLQVLSALACVALSVMRLWRHDFGGDQPNKRPALLLFYTLALIEALIFLLEQAYWVWMFSRQNLIKTVSDDCKLGEYYGPDSLKRFFFDAYSRCITGSIFDGTKMDLVTFAEELILSEFLGNQLIGVRILQQFTTEGSSANAGESNLNTLRNVGTNARSIERLVEMINWKSPGEEEVRRCAAEVLSKLADKSRNALRVSGIPGAIESVMSLLYTDESAPDSAAPHDVSPAARSYDHQQFKLLGLLILKRIARDHDNCGKIGNTRGLLSKIIELTDASPELLHNTRAPESPVRIVRRALKVVKILVSATSSTGKMLRQEVADNVFTVSNLRGVLQHGQQHTALQKLATEILSHLAMDAKGKQVIVGTGGVVKLLLSIFVNGEKELGAEAGEALAMLALESQASCAAILKQDDVLDHLMSALEGDGGPRRLNAARVLRNLCAYAGEKHRRRLSTVTKAMPTVLKATMTGSERTLEVFVGLTVQICKFIDGVRFAGELCGAGIDERSYVERLASILREHRYPDITVPRMRRFVVQQAIWLMTSSSAAAASAAAGADYVSLLREAGMERLLESIADTTSELECYHAFSGSVGISKHRESFSAAVDAALELLGGDGARAEA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_03g0018530 | OsCMeo_03g0018530.01 | Chr03 | 14500633 | 14503307 | + | NAM | ||
| CDS seq | atgaagtacaggaaggggggcaacgcccccgccaccgagcccgacgacgacgccacgacgaaaggaggtcacgacgtgccgccgagcatcaaggtggacatcggtgagtaccatggaggaggtatcgggaacggggacggtggctcggcctcgctcttcgagccgcggccggaggagacaccggtgagccggaggaacgatcgcggcggcggcggcggcgggcgcgagccgccggagaagcggctcacgctgttcgctctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggaagctagacttcgtgtgggcgacggtggtgctcctcggcggcttcgcgagcgcgctcagcaccaccgacttctggtgcgtcaccgtcatcctcgttggctccggggcgcgcgtcttcggccgcagccacgagctggagtggcagcaccgctctacgctcacctcctccaccgccggtggcgcgctgcgctccacctcccgccgcttgctccgcagcctcgggcactctcccgccgccaacccgaccgacgacggcggcgcccgtggcagtgcgaccgagacgcagttccagcaccagatcgtcgctcgcacgaagcagcgcgtttggcacgtgcccgacgtgtcgctactcccctacaccggcaggttgttcgtctccaagaacatcgggaggctcttcagctggctgcaggtgctctccgccttggcctgcgtcgcgctctcggtgatgcgcctatggcggcacgacttcggcggcgaccagcccaacaagcggccggcgctactgctgttctacacgttggcgttgatcgaggcgctcatcttcctgctcgagcaggcgtactgggtatggatgttctcccggcagaatctgatcaagacggtgagcgacgactgcaagctcggagagtactacggccccgactcgctcaagcgcttcttcttcgacgcctactcccgctgcatcacggggagcatcttcgacggcaccaagatggacctcgtcaccttcgccgaggagctcatcctgtcagagttcctcggcaatcagctcatcggcgtgcgcatcctgcagcagttcaccaccgagggctcatcggccaacgccggggaatccaatctcaacacgctgcgcaacgttggcacgaacgctcgctccatcgagcggctcgtggagatgatcaactggaagagccccggggaggaggaggtgcgccggtgcgcggccgaggtgttgtccaagctcgccgacaagagccggaacgcgctccgcgtgtccggcatccctggcgccatcgagtccgtcatgtccctgctctacaccgacgagagcgcgccggactccgcggcgccacacgacgtctcgccggcggcgcggagctacgatcaccagcagttcaaactgctcggcctgctcatcctcaagaggatcgccagggaccacgacaactgcggcaagattgggaacacccgcggcctcctctccaagatcatcgagctcacggacgcgtcgccggagctgctccacaacacgcgggcgccggagtcgccggttcgcatcgtgaggcgcgcgctcaaggtcgtcaagattctggtgtccgcgacgagcagcaccggcaagatgctccggcaggaagtcgccgataacgtgttcacggtgagcaacctgcgcggcgtcctgcagcacgggcagcagcacacggctctgcagaagctggccacggaaatactgtcgcacctggccatggacgccaagggcaagcaggtgatcgtgggcaccggtggggtggtcaagctgctgctgtcgatattcgtcaacggcgagaaggagctcggcgcggaggccggcgaggcgctggcgatgctggcgctggagagccaggcgagctgcgcggcgatcctcaaacaggatgacgtgctcgaccacctcatgtcggcgctggagggcgacggcgggccgcgtcgcctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcggcggcgcctctccacggtgaccaaagcgatgcctacggtactgaaggccaccatgacggggagcgagaggaccctcgaggtgttcgtcggcctgacggtgcagatctgcaagttcatcgacggcgttcggttcgccggcgagctgtgcggcgccggcatcgacgagagaagctacgtggagcggctggcgagcatcctgcgggagcaccggtacccggacatcacggtgccccggatgcggcggttcgtggtgcagcaggccatctggctcatgacctcgtcctccgccgccgccgcctccgccgccgctggcgcagactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgcgttctccggcagcgtgggcatcagcaagcaccgggagagcttctccgccgccgtggacgccgcactcgagctgctcggcggcgatggagctcgagctgaggcctga
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| Protein seq | MKYRKGGNAPATEPDDDATTKGGHDVPPSIKVDIGEYHGGGIGNGDGGSASLFEPRPEETPVSRRNDRGGGGGGREPPEKRLTLFALRLAVLEKAASGLGKLDFVWATVVLLGGFASALSTTDFWCVTVILVGSGARVFGRSHELEWQHRSTLTSSTAGGALRSTSRRLLRSLGHSPAANPTDDGGARGSATETQFQHQIVARTKQRVWHVPDVSLLPYTGRLFVSKNIGRLFSWLQVLSALACVALSVMRLWRHDFGGDQPNKRPALLLFYTLALIEALIFLLEQAYWVWMFSRQNLIKTVSDDCKLGEYYGPDSLKRFFFDAYSRCITGSIFDGTKMDLVTFAEELILSEFLGNQLIGVRILQQFTTEGSSANAGESNLNTLRNVGTNARSIERLVEMINWKSPGEEEVRRCAAEVLSKLADKSRNALRVSGIPGAIESVMSLLYTDESAPDSAAPHDVSPAARSYDHQQFKLLGLLILKRIARDHDNCGKIGNTRGLLSKIIELTDASPELLHNTRAPESPVRIVRRALKVVKILVSATSSTGKMLRQEVADNVFTVSNLRGVLQHGQQHTALQKLATEILSHLAMDAKGKQVIVGTGGVVKLLLSIFVNGEKELGAEAGEALAMLALESQASCAAILKQDDVLDHLMSALEGDGGPRRLNAARVLRNLCAYAGEKHRRRLSTVTKAMPTVLKATMTGSERTLEVFVGLTVQICKFIDGVRFAGELCGAGIDERSYVERLASILREHRYPDITVPRMRRFVVQQAIWLMTSSSAAAASAAAGADYVSLLREAGMERLLESIADTTSELECYHAFSGSVGISKHRESFSAAVDAALELLGGDGARAEA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.619817 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0363100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g24820 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0363100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0018670 | RBH | 0.0 | 1.021057 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0018490 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0018570 | RBH | 0.0 | 0.078801 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0018340 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0235100 | RBH | 0.0077445 | 1.5676405 | 0.013744 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0018170 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0235600 | RBH | 0.011419 | 5.6094045 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0018390 | RBH | 0.107891 | 0.094829 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0018410 | RBH | 0.495039 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0018490 | RBH | 6.340504 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0018340 | RBH | 0.801913 | 0.669633 | 0.078197 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0018250 | RBH | 0.198381 | 4.657970 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G018270 | RBH | 0.367516 | 0.344801 | 0.240164 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0018220 | RBH | 0.0 | 1.572843 | 0.0 |
