Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_02g0008020 | OGI:02017480 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr02:5957244-5957462 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctagtgttcttccactccagtttgcatgaacctcgcaatgagccgcatcacattctcatacgaggagcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcctctcctcggcctcctcgccgccgccgtccatcagcaccgacaccacccgcgcgaCgtcaccccgatcaactgtcaagtactcctcgttcaacat |
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| CDS seq | atgttgaacgaggagtacttgacagttgatcggggtgacGtcgcgcgggtggtgtcggtgctgatggacggcggcggcgaggaggccgaggagaggaggaggaaggccaaggagtacggtgagcaagctcgaagggccatggcgaaaggaggctcctcgtatgagaatgtgatgcggctcattgcgaggttcatgcaaactggagtggaagaacactag |
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| Protein seq | MLNEEYLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEQARRAMAKGGSSYENVMRLIARFMQTGVEEH |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_02g0008020 | OsCMeo_02g0008020.01 | Chr02 | 5957244 | 5957462 | - | NAM | ||
| CDS seq | atgttgaacgaggagtacttgacagttgatcggggtgacGtcgcgcgggtggtgtcggtgctgatggacggcggcggcgaggaggccgaggagaggaggaggaaggccaaggagtacggtgagcaagctcgaagggccatggcgaaaggaggctcctcgtatgagaatgtgatgcggctcattgcgaggttcatgcaaactggagtggaagaacactag
More
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| Protein seq | MLNEEYLTVDRGDVARVVSVLMDGGGEEAEERRRKAKEYGEQARRAMAKGGSSYENVMRLIARFMQTGVEEH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0206100 | RBH | 8.413288 | 9.778836 | 2.761018 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11130 | RBH | 0.815880 | 0.742404 | 0.186394 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0206100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008130 | RBH | 0.462661 | 0.0 | 0.182864 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008240 | RBH | 0.117144 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008000 | RBH | 5.277094 | 0.0 | 0.394575 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0007980 | RBH | 0.214089 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008020 | SBH | 19.333998 | 0.0 | 0.461660 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100100 | RBH | 12.204518 | 4.837131 | 0.349339 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0007970 | SBH | 0.685973 | 0.098889 | 1.358121 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0103800 | SBH | 6.6460495 | 4.4753855 | 0.014996 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008400 | SBH | 1.275004 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008010 | SBH | 2.590594 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008290 | SBH | 13.118425 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008280 | SBH | 1.609857 | 0.355582 | 0.336076 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008040 | SBH | 0.689381 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008150 | SBH | 1.309366 | 0.0 | 1.285829 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0008160 | SBH | 2.523702 | 2.288974 | 8.975902 |
