Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_07g0010350 | OGI:07030420 | 14/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr07:10515232-10520741 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTTGCCGTCGACCTTCCCGTACTTCATACTCGTCGCGCTGGAGGTCGGGGGACTCTTCCGCGGACTTCTGCTGCTGCTGCTGTACAGCCTCTACCCCGTGCTGCTCCTGCTCGGCCATGGCCGGGCGACCAAGCTCATGGTCATGGTGAGCTTTGCCGACGTCAGGAAGGAGGATGGGTCGTCGTCGTTCAGGGTGGGCAGCGCGGTGATGCCCAAGCTGTTCCTGGAAGACGTCAGCGCTGAGGTCCTCGATCGAGGCGGCGGCGCAGCGGGGATAGAGATAAGAGATGGAAGATATGACATATGGGCCCAAGGGTATTTTAGAACTTTCATGCCATTTCTCTCTCCTCTTCAACCAAAAATTATTATTTTAATCAGCACGATGTCTATTGCCAAATTACCATGTTTATAGAGTGTTTTCCTCCAAAAGTGAGTTCGGGCAGTGTCCTACGGCTAAAACCACGAAATTACAGTGTCCTGTAGACAAAATTTGCCTTTATTATTAGTGTGGGCATGGTAGATCGTACCTATTATGCAGGAAGCAAAGCAATACTGCTCGTATTGTGGCCAGGGTTTACGATTCCAACAAAGTCCGGTCGGATTTCGCGAAATTTCGACATTCCGACGAGGCTCGAAAGTAGAAACCGTATGAGATTTCGAGGAGTTTCATCCAAATTCAAATTTGAATTGATAAAAAAAAGAAAAAAACAAATAAAATCTTATAAATACTATGATATTCATAGAACATATTGGGATATAAATATTCTAAAAAAAATGATGTATTGTGTGTATTTACTAAAACTTACACCAGGAAAGAAAAGAATAAAGAATTAAAAAAAAGAAAACACTTACATGGCCCGAATTGCATGTACTAGGCCCAGTTAGTAGTTGGTCCAAATTACAGGTTACAGATCGAAATTTTGATCAGAATTTCGCTAAAACCGACAGGTTTTCGAGAACTTGTCAACAAACTCAGGGAATTTGCATTCAAATTTTGGTTTATGAAATTTGTTCGGAATTTACCGGTTTTCCACCGGATTTCGCGAAATTCCAAATTCCGCCAGTGCCCGAAATAGAAGGGCCTGTCGGAATCGTAAACCCTGATTGTGGCGGCAGCTGAGGCGGTAAGGCCTAGACATATAGCCGCCACCTAGCTCATATGCTTGATTGAATTGATTTTTTTAGAACTGATTGAATTTATTCTATCCTTGCTTTCTGCATCTCCACTCAAACGAAGCTCTGAAGTCTGAATGAGTAGCATGATATTGAACCTGTCAATTTGATATGGGCTTTTCTTATTGAATAATCTAGAGTGTTGTAGGCCTGTGATCTTGTGTGGGCTTCTAGTGTTCTAGCCATGGAAATCACGTAAGCAGGTAGTTTTCGTACGAATTTCGTATAGATTTCTTCGTGTGTATAGCAAGGTTCAATTCAAATTATTGAAACAGAGTCATATAGCAAAATGACCAAAACAAAAGTTGTATATATTTATTATTTATACAACTTTGTTGTTGATGACTTTTTTAGTTAAAATTATTTAGTATTTGAAAATGTTGTTTGAAATTTGTCATAATTTGAAATTCAAATTTTATATAGGTCAATTAAACTCAGATGGAGAAATAACCAAAATAAAATTGGTAGATCTCAATAAGTTATACAACTTTGTTTTTGACAAGTTTTTCACATATGTTCATTTAGTATGCTAAAATTTCGAAGGTTTAATATTTTGAATTTAAATGAAAGGAGGAAGGTAAAATGGACTTCTCGGCAAGGGATGAGCAAAAGGGCTGGCCCGTAACAGGCCTTTTGCTCCTCCCTCGCCAATAAGTCTATTTTGTCTCCGTCCTTCAATTAATTTCAAAACATTAAACCTTCGAATCGAATTTTATCATACTAAATGAACTTATGTAAAAAAGTTGTCAAAAACAAAGTTGTATAACTTATTGAGATCTTCCTATTTTATTTTGGTTATTTCTCCATCTGAGTTTGATTGACCTATATAAAATTTGAATTTTAAATTATGACAACTTTAAATAACATTTTTAAATACTAAATGATTTTAACTAAAAAGGTCATCAACAAAGTTGTATAACTCACCAATATATACAACTTTTGTTTTGGCCATTTTTCTATATGACTTTGTTTAAATAGTTTGAATTTGAATTTCAAATTATGACAGCTTCAAACAATATTTACAAGTACTAGATGATTTCAACTGAAAAAGTCATCAACAACAAAGTTGTAGTACTCATCAATATCTATAACTTTTGTTTTGGCTATTTTTCTATACGACTTTGTTTAAACAGTTTAAATTTGAATTTCAAATTATGACAGCTTCAAACAACATTTACAAGTACTAGATGATTTTAACTGAAAAAGTCATCAACAACAATGTTGTATAACTCATCAGGATCTATAACTTTTATTTGGGTCATTTCTTCATTCGTCGAAGTGATTTGTAACATTGTTCACAAAATGTACATATCTCTTATACGTTTATAAAAAATAAGAGAGATATGTAGATTTTGTGAACAATGTTACAAATTACTTCGTCGGATGAAGAAATGATCAAAATAAAAGTTATATATATTGATGAGTTATACAACTTTGTTATTGATGACTTTTTGAGTTGAAATCATTTAGTATTTGTAAATTTTGTTTGAAGTTGTCATAATTTGAAATTCAAATTCAAACCGTTGAAACAAAGTCATATAGAAAAATGACCAAAATAAAAGTTATAGATATTGATGAGTTATACAATTTTGTTGTTGATGAACTTTTCATTTGAGATCATTTAGTTTTTGAAAATATTGTTTGAAGTTGTCATAATTTGAAATTCAAATTTTATATAGGCCAATGAAACTCAGATGGAGAAATAACCAAAATAAAATTGGTAGATCTCAGTAAGTTATACAACTTTGTTTCAAACAACTTTTTCACATAAGTTCATTTATTATGATAAAATTCGATTTGAAGTTTCAAAATTTTGAAATTTCCACGTTAAATGACCATTTTGTCCAAGTAACTTGTATAATAGGTTTCCAGATACCAGGGTTATTCTGGTAAAATCGCATCAACATAGCTTCTTATACATATATCCAAACCCTAGCCATCCATTCTTCACCTTCTCTTTCCCCACCCTCACACCGCCGCCTACCACGCCGTCGTCATCGTCCTCCTCCCTTCGCCCACCATCCACAGCCCCCTCGGATCTCGCCGCCCCTTCCGCCTCCCCCTCCGCTCCTCTCGCCGCTCCTCCGTCCCCCCCCTCTTCGGCAATCTCGCCGGCGTCCCAACTCTAGCGGGAGCGGCGGTGGCAGCAAGGAGGCGCGGCGGCAACGACCTGCGGCGGTGGATTTGGCGGCGCCGTCCTAGGGAAGGCCGGATCCGCCGCCCTAGGAAGGAGCTCGGCTCTCGGCGGCGGGCGGCGGGCACAGTGACAGCCTGCTCCGGCGGATCTGGTGGCGCCGTCGCAGAGGCGGAGGACAGCGGCGCGCCAGAGACGGAGGGCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCGGTGACCTGGTACGGCGGCGGAAGGGAGTCAATGCGAGGGGGTTCAGGCAAGGGAGTCAATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCACACTGTGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTATATCCACCCTACTCGCTTCCCTAATCTTCCTTCCCCCTCGTGATTGTTGCTGTTCTTGCTGCGATAGATGGGCTACAGATGCAACTAGAGATGTATTGCTTGAGCTCTTCATAATTCATCAACACTTCATGACTGTTGAAACTGAATTGCATCTATACGTTATAAGTACTACTCCTAACCTGTAGAATTATCAATCTATGGCAATCAACCTCAATGAATTATCATCTGACCTGCAAGCAGAATGAGAAACCAATATAATATCATATAGCTGTAAGACATGATCTTTTGAACAAGAGACTTGCATTATGTAGTGTTTTATTTATCCATCACTTGAGCAGTTTTCACAATTCCTATATATCGAATGGTAAACTCTACTTCAACGTACTTTCAGAAAATATGAAATATATAAATGTTAACAGTAAGATGAAATCAAAAGTACTAATCTCCAATAGTCCATATATATCTGGATCATATCCACCTGAAATAAAAGATTACCACTTTTTTATGTACTGCAATTTGCAATTAGCAATTAAACATGTGCATGCTGCAAAAATATTCTACAAAAACAGGACTAGCCATCTTTCCTTTTCCTTTTAACAAACAGTAATAGCAAACTATCAGTAAACAGAGAACATCTACATCAAGGTATATCCACCCTACTCGCTTCCCTAATCTTCCTTCCCCCTCGTGATTGTTGCTGTTCTTGCTGCGGTAGATGGGCTACAGATGCAACTAGAGATGTATTGGTGTGCTGTGTAGAGGTTTTGGATGTGCTCCAAATTGAAATGAGGCTGTTTTTCCTGTGCGAATTGCTGAGTTTGCTTCAACTTTCATCCTTCCCATGGTCACTTTTGGTGAGTTCCTATGAGTCCTATGGTCACCTTTTTTTAGAAAGTAATAAGTGAAATCCTATTATGAATGTCAAATCTGATGACTCCTTTTATCTTATTCATGTAAAAAGGATTGGTTGCCACCATATGTGGTGCTCAGGAATGTCAAAACTGTAGTGGCATGTTTCTTCCTAACATGTGAAGTGGTTTTTTTGGCTATCTAGCAAACTTTTGGCTGTGCTTTCTCATGTTATACTATGCTAAGCAGTTGCATTGCAGTTTAAGATGCCTCAGTTTATACCCAATTTTTGGAAATTTGTGAGCATGATGTCAGTCTTTTCCTTTTAAATTAAGGGATAATAGGAAGAAACCAGGGCTGGCAGTTCTTTTTGTTTACCAATTTTTCCACTGTACAAGTGCAAAAGCATTTCAATATCTTTTCAGAGTTCACGAAAGAACTGGGCTATTTATTTGGTAGCAGGATCGGAAGTAGGGTTGTTTTTTTCACCTATAACTGTTACTTTAGTAAGGAAATTTGAGGGTGCCTCTCCCTCATGCGTGAAAACCATTATTTCCACAGTGAAAAGGGGTAAATATATATATATTGTTTTGCCTGATCTCTGAGCATGCTTAGTTTCTTTGTTACAAAATGCTGAACTGAGATGAACTGAAAATTTCAGAAATGTGCGAAGTGCAGGTGGAGATAACATACAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCAGTAACTGCATGAATATTTTTTATTCATCTATTAAGTGCTTGAACAGTAGAAGAAACTAGGATGATATGGCAGTTATTGATGTTTTATCTTGTGCATATGCAGTGCTGCTAAGCTCACTTGGAAGATCTTGGTCATGCGACATCCGGTGA
More
|
||||||||||
| CDS seq | ATGTTGCCGTCGACCTTCCCGTACTTCATACTCGTCGCGCTGGAGGTCGGGGGACTCTTCCGCGGACTTCTGCTGCTGCTGCTGTACAGCCTCTACCCCGTGCTGCTCCTGCTCGGCCATGGCCGGGCGACCAAGCTCATGGTCATGGTGAGCTTTGCCGACGTCAGGAAGGAGGATGGGTCAGGCGGAGGACAGCGGCGCGCCAGAGACGGAGGGCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCGGTGACCTGGTACGGCGGCGGAAGGGAGTCAATGCGAGGGGGTTCAGGCAAGGGAGTCAATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCACACTGTGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTGGAGATAACATACAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCATGCTGCTAAGCTCACTTGGAAGATCTTGGTCATGCGACATCCGGTGA
More
|
||||||||||
| Protein seq | MLPSTFPYFILVALEVGGLFRGLLLLLLYSLYPVLLLLGHGRATKLMVMVSFADVRKEDGSGGGQRRARDGGPVGQAGSEAVAEPRRRAGVDGVGGGGGDLVRRRKGVNARGFRQGSQCEGVQARLAAWLTLWRLLSSGGKVLGEEEKAAENIYIKVEITYRGRQLLPILTLQHVRDIMLLSSLGRSWSCDIR |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_07g0010350 | OsAzu_07g0010350.01 | Chr07 | 10515232 | 10520741 | + | NAM | ||
| CDS seq | ATGTTGCCGTCGACCTTCCCGTACTTCATACTCGTCGCGCTGGAGGTCGGGGGACTCTTCCGCGGACTTCTGCTGCTGCTGCTGTACAGCCTCTACCCCGTGCTGCTCCTGCTCGGCCATGGCCGGGCGACCAAGCTCATGGTCATGGTGAGCTTTGCCGACGTCAGGAAGGAGGATGGGTCAGGCGGAGGACAGCGGCGCGCCAGAGACGGAGGGCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCGGTGACCTGGTACGGCGGCGGAAGGGAGTCAATGCGAGGGGGTTCAGGCAAGGGAGTCAATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCACACTGTGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTGGAGATAACATACAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCATGCTGCTAAGCTCACTTGGAAGATCTTGGTCATGCGACATCCGGTGA
More
|
|||||||
| Protein seq | MLPSTFPYFILVALEVGGLFRGLLLLLLYSLYPVLLLLGHGRATKLMVMVSFADVRKEDGSGGGQRRARDGGPVGQAGSEAVAEPRRRAGVDGVGGGGGDLVRRRKGVNARGFRQGSQCEGVQARLAAWLTLWRLLSSGGKVLGEEEKAAENIYIKVEITYRGRQLLPILTLQHVRDIMLLSSLGRSWSCDIR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0010310 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0010300 | RBH | 14.349657 | 32.996449 | 22.697109 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0185500 | RBH | 7.9152015 | 6.4921375 | 11.705655 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0010440 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0010310 | RBH | 0.687324 | 8.758495 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G010270 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0010070 | RBH | 7.741456 | 58.051594 | 20.833879 |
