Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_04g0004940 | OGI:04027330 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr04:7851568-7856738 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGTTTTTGCAGCTCAGCTATGCACTCAACTGTGGTGATTTGCTAATCTGTGTTAATCTCTATTAGATTATGTGTGCTTTTCAGCACAGTAGTTCTTTAGGACCAAACCTTTTTACATTAAACAGTTAATCTGCAATATAATTAAGTTATTTTGAATAAATTATAACATTCATGTTCTGCCATTTAGCAACTGACAGTTTTGTTTTTATTTCAGAGGGAAAGGGAAGCTTACTTTGTTTTCTGAAAGCGAAAGGTTGGGCAAGCTCATTGAGTGTCGGTGGTTGCACTTATGGGACACAACGCTCCTCATATGCCTATATCTTTGAAATGTCTATCCGCCTTACTGATTCAGGACTGAAAAATGTACGTATAACTTCTTATACCTAGATCTTTGATTGAAATGTCTAAGCATGTTTTGAATGAGTGAAACTCCCTTTCCTTTTTCATATCAAAGTATTTTACATGTTGATGTAGTGCCCGCATGGTTTAGCTTGACATTAAAATGTTGTGCAGTCCGAATTTGAGGAACATTGCTGACAATTTCCTATCACCTATCACTGTCTGTGTTCACCGCAATAATTTCAGATGTACCATCCCGTCTTGTAACTAGAAAGACGCATGAAAGTTTGTTACATCAATTTCAGCACTTCAATTTTTTGTGAAATACCATTAGAACATAACCACTTTGCTGTGATATGAAAAATAAATGTTTTATACCTTGGGAGGTTGTATGGTCATGTCTTCTTATACTATATTGGTCATTGATTTCATTTGATTTGATTGACTAATGTCTCTAAATTTAGCTACCCTTATGGTAGCCCAAGGAGAATTGTATGTTTGACGTCCCTGTTTTATGCCATTTGATCCCTCCAGGAAAACCAGCTGCCATTCAATATGGCAATGGTTCAGTTGCTGGGTTTTTCAACGAGGATAGTGTTACAATAGGTGATCTGGTTGTGAAAGATCAGGTATGCGCTATATATCTCAGTTACTGATTATCTCTGATCATATACTCCAAAATATTTGAACACCGTTGCTTCACCGCTTTAGAAATTCATTGGAGTTACAAAGGAGCCAAGCCATATACTTTCATGGTTGCAAAATTTGGTGACAATCTTGGTCTCGGATTTCAGGAAATAGCTGTTTGGAGATGCAGTGCCTGTGTGGTAAGACAGCATGATCTATAGTGGTATGATATACTGGTAGTTCGGTCCATTCATTACAAGCTGCTCTTTTTCTTAAATTATTTGTGTTCTTTGGGCATTTTGCTCAATAAGGGTTAATCCTCGCAAAATATAATCTAATTCACCTCACTCCTTTTTAACCCGTTAAATTATCGCTATCACCTTCTATAGAGTTCCTTGCACGGAAACCTCTGTTCTGAAAAGCTGCAAATTATTTGTAGTTATGGTGTTTTTTTATGCATTCCATATTGGCCAAAGCATCGTCGGCTATGACCAAGTAGTCTGCACATGTGCAAGATTTGTGGGGTTTGGATATGTATTATTTCTCCCCACTATTGTTTCCTGATGTGCCTTGGTGTTGTTTCCTCATTTTATTTGTTCCATCTGACCGGCCATGTTGGTTGGTATCCAGTTTTCCCTTTAGTTGGATTCCAAAAATATTTGATATCCCCACTCACCTTCTCTTTGTAGTACCTGAGTCTTTTATGCAGCTTGTGTATTTCACAATTGACCCTTTGCAGGTGAATATTTGGCTTTGGCTGGTGAAAAATCAATGCAGCGGATACAATCGAACTCGAACTTGATACGCATTGTTCCATCTGTGGTGTAAGATCCTTTTGATTGCACTATAGATTTTTTATTTTTGGTGGTCTAACGCAGTAGGCTGACACTCCTTTTAACCAATCTATTGATTATCTATTCTTGGCTTGGACAATATGGAGATAGCGTGTCCGGACAAGAGTAGCATTATTTGTAGGTAGGACATACAAGAAGTAGATATATTTCTAATTTCTAAATTGTGAATGTATTATTAAGTGCTTTAGCATGTCATAAGTAGAAATTTGCTGGAATGGTAGATAATCATGCCCCCTTTTAAACATAGCATGGGAATTAGAGTAGAATCAGGATGCTTTCCTTTCCTTAGTAAAAATGTTCTTGACTGCATTTCAAAACTTAGACCATCATCTATTTCAGTGTAATACCATTATTCTGCAGAAACACACAAAACTATCATTGAATAGATAGTCCTATATTTATAAGGCATGTAATTCTTGATTCTTTTAATCAATCCAAGTGCTATTTTGCTGTGGTTCATGAATCTTTGCGTTACCTGTAAAGCTGTGGTTTATATATTTCTTTGGGAGCTGGATTCTCTTGGTAATTAACTCAATCACCTCTGTCATTGGTGGATTAACTGTCTTCATGCACCTTTACGCCATACATGCTTTATGTAGTGTGTAGGCCTCAGGGATAAAAATGTATTTAACAATATGGTGTATATACAAGCTTAGGCAAAATTTCCAGATACAAACTTACTCCTTTAGCCTTCTCCTAAAAATTGCTTACTATTATTTCCCTGGAGCTGTCCTCAATTTTCTCAACAACGCTCATATTCTAGATGTATTAGTTATAGCAAATAATGTGATTGCTCAGCAGGAAGTTCAAGGATATCTGAATATTTGTTGGCAAATGATGTGTTCAGTCCTAAGAATACTCTTGCACTGTTTCAGGCTTTGGTTCGCATAATAAACTGAGAAAATATTATGGGAGTCTTCTCTTCATTGCTGACCTAGGCAGCAAGGCATATGGATATGCCTTCAACCAACTCGAGAATTGCACTGTAAAATATCAAAAAAAAAAAGGAAAGTGTTTGTGTTCTTATCAAGGTCTTTCTGTTGAGTTTTAAGGTTCAGAGTGAAGATCCCTTGATGGTCCATTTGTGTTGGTTTGGATCAACAACATGCCATGGGCTGCTGATACTAGCATGGCGGCTCTTGGGGCCAAGGTAATTGAATTCTTCGCTCTAACAATTGTTTCTCCAGTATTTTTTTTGTCCATATAGTATACTTTGTATTTCAAACCTATCTTCTTGGTGGGGGAAGAAGATCCATATTTCCACCTAGGGAATATAGTAGGCATGTTCATTTTCTGTTGACAAACCTGTGATTAGGACTAGCCATTAGCCTTATGTATTTACTGACCAAAATGTGGACATAAATCCTTTTCTATGGTTCTTGAATTTACACAGATCAAGAATAAGGATATTTCTACTTGGACATGTATACAACTTTAGTTGTAAAAACTTAGATGATGTTTAGCCATTTAGCCCATCATAGTACTTTCCGGTCATTTATTATTCTGTTTCGTGTTGTAGCAAGGCAAACTTTATGATTTGTTCGTTGTAACCACTCTGAGGTAAGCATGATTTCTTTGACCGATGGAGGTAGACCGTCTTGTGATTTGAAGAAAACAATTGGTATGTTGATAATGCTAAAAGAACGCTTAATTGTGCATGTAATTTGTTATAGGGAACTAGATTGAACTAGGTTTATTTTTTGTTGTCTGGTTTGTTCATCATTTTTTTACAGCCAAAGTAATAACCAAGGTTCTTGCTTCAAAATTTTGTTGTTACTCTAATACCAGTCAATATTTCAGTGATATCTATTAAATTACTTCTCCGAAGCTACATTCGAACTCAGCAAGTCACCCTATCCTATTTAACTGGTTTCTTTTTTACAGCATTAAATATATGCTATTTTGCCCATGTAACGAAGAGCAGTTAATTTGGGGATCACTGATCAGTGATCACATAAGCATCCATTTTTTCTGCTGAAAAAACAAAACAAACACTTTTTGCAAAAGCATTTGCTGGATAATCTATCTATTTGGTTTATTTGAAAAAAAAACTTCCACTCATGGTATATTTCTATTTAGGAAAATGAGCTTATGTTTCCTTGCTCATTTTTTCATTAAAAGGCTTTCCATCAAGTATACATTTTGAACGGCACCATGGTTTGCTACTGCCTAACTGCCTTTCTAGCTGATGTTTGATCATGTATATTTTAGAATTACTTTACAGAAGGCATTGGCATTGTCCTTATAGGGACTTGGGAGATGATCATCGTTTTAATCTTCTACTTGAAATTCTTTTACAAGTATCTCTTTAAATTGAAAGATTTTGATAAAGGGTGCAAAAAGGGTACAAACCAGAAAGCACTGTTGACTTGTCTTGTATTGAAAATGCTTTGCAAGGATAGATCTACTAGCTATTGAACTGAGTGTAAATAAAGGTCCTGTATATTGTATAAATTCAGTGGAAAGTTACACGTAATGTCTAGCTGTGCTTGCGACCATATGGCATTGACTAATATTTGATGCATTTTGTCTATGTAGGTCTTACAAAAGGTTTGATCTGCTGGTCTACTGAAGAAAACATTATTTAGTGTTGCCTACAAATTGTAAGTTTGGGTGTGATCAATACTGAGAATTCCTTTGACAAGGTTTTCCAAAAAGAATTTCTTCTATGGAACTCCTTGATTTGATGGACACTAAGTTTCTTCTGTTCTTGTGTCCTTTGATCTTCTCTATAGTTTCATTACTTGCTCTTCTTTTTTGACAGAATAGTTTTCAGTGAGGTAGCTGTCGATGTCAGAGCACCAAGTGCTTATGGATCTTACCTAAATGTTTGCCGGAGGTTGTTCATCGGTCACAACAATCCTCATCATGTTTTCATGTCAACTATTTTAGCCCTTGTTCCCATCAATTAGTTAACTTTTGGAGCTAAAAGCTTCCGATAAAAAAACTGCAGGTACATCACACGGCTAAAGAGTTTGCATCTTTTTATATAATCTGTAATTATTTAACATTTTAATCTTTATGCAAGTTCTCTTTTCCTTTACTCCAGGGGTATGACTAGAGATCACATAAATATGACTGATCAATGCTCTACAATACATGCTACTCCTACTTCATCTAGCCACATTGTGTCGTCGGAATATACATGCAGCCAGGTTAAATAGATTTATTTGGAAAGCTTATTGTCTTTCAGCAACAAATATACATGTTTGTTTGGCATCGTTTTGAGCCTCTTTACAGGTACTGATTTACCTTTAATTCTATAAAAAATGTTATATTCATTATAGAATTATCTTGAGCTTTGTCTATGTCACCTTAGTTATTCCAAAGGTATAACTGATTTATTTCATG
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| CDS seq | ATGTTTTTGCAGCTCAGCTATGCACTCAACTGTGCAACTGACAGTTTTGTTTTTATTTCAGAGGGAAAGGGAAGCTTACTTTGTTTTCTGAAAGCGAAAGGTTGGGCAAGCTCATTGAGTGTCGGTGGTTGCACTTATGGGACACAACGCTCCTCATATGCCTATATCTTTGAAATGTCTATCCGCCTTACTGATTCAGGACTGAAAAATCCCAAGGAGAATTGTATGTTTGACGTCCCTGTTTTATGCCATTTGATCCCTCCAGGAAAACCAGCTGCCATTCAATATGGCAATGGTTCAGTTGCTGGGTTTTTCAACGAGGATAGTGTTACAATAGGTGATCTGGTTGTGAAAGATCAGCAAGGCAAACTTTATGATTTGTTCGTTGTAACCACTCTGAGAATAGTTTTCAGTGAGGTAGCTGTCGATGTCAGAGCACCAAGTGCTTATGGATCTTACCTAAATGTTTGCCGGAGGTTGTTCATCGGTCACAACAATCCTCATCATGTTTTCATGTCAACTATTTTAGCCCTTGTTCCCATCAATTAG
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| Protein seq | MFLQLSYALNCATDSFVFISEGKGSLLCFLKAKGWASSLSVGGCTYGTQRSSYAYIFEMSIRLTDSGLKNPKENCMFDVPVLCHLIPPGKPAAIQYGNGSVAGFFNEDSVTIGDLVVKDQQGKLYDLFVVTTLRIVFSEVAVDVRAPSAYGSYLNVCRRLFIGHNNPHHVFMSTILALVPIN |
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| Function | Nardilysin-like [UniProtKB/Swiss-Prot:F4HNU6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0004940 | OsAzu_04g0004940.03 | Chr04 | 7851568 | 7856738 | + | NAM | ||
| CDS seq | ATGTTTTTGCAGCTCAGCTATGCACTCAACTGTGGAAAACCAGCTGCCATTCAATATGGCAATGGTTCAGTTGCTGGGTTTTTCAACGAGGATAGTGTTACAATAGGTGATCTGGTTGTGAAAGATCAGGAAATAGCTGTTTGGAGATGCAGTGCCTGTGTGCAAGGCAAACTTTATGATTTGTTCGTTGTAACCACTCTGAGAATAGTTTTCAGTGAGGTAGCTGTCGATGTCAGAGCACCAAGTGCTTATGGATCTTACCTAAATGTTTGCCGGAGGTTGTTCATCGGTCACAACAATCCTCATCATGTTTTCATGTCAACTATTTTAGCCCTTGTTCCCATCAATTAG
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| Protein seq | MFLQLSYALNCGKPAAIQYGNGSVAGFFNEDSVTIGDLVVKDQEIAVWRCSACVQGKLYDLFVVTTLRIVFSEVAVDVRAPSAYGSYLNVCRRLFIGHNNPHHVFMSTILALVPIN |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0004940 | OsAzu_04g0004940.01 | Chr04 | 7851568 | 7856738 | + | NAM | ||
| CDS seq | ATGTTTTTGCAGCTCAGCTATGCACTCAACTGTGGAAAACCAGCTGCCATTCAATATGGCAATGGTTCAGTTGCTGGGTTTTTCAACGAGGATAGTGTTACAATAGGTGATCTGGTTGTGAAAGATCAGGTATGCGCTATATATCTCAGAAATAGCTGTTTGGAGATGCAGTGCCTGTGTGGCAAACTTTATGATTTGTTCGTTGTAACCACTCTGAGAATAGTTTTCAGTGAGGTAGCTGTCGATGTCAGAGCACCAAGTGCTTATGGATCTTACCTAAATGTTTGCCGGAGGTTGTTCATCGGTCACAACAATCCTCATCATGTTTTCATGTCAACTATTTTAGCCCTTGTTCCCATCAATTAG
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| Protein seq | MFLQLSYALNCGKPAAIQYGNGSVAGFFNEDSVTIGDLVVKDQVCAIYLRNSCLEMQCLCGKLYDLFVVTTLRIVFSEVAVDVRAPSAYGSYLNVCRRLFIGHNNPHHVFMSTILALVPIN |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_04g0004940 | OsAzu_04g0004940.02 | Chr04 | 7851568 | 7856738 | + | NAM | ||
| CDS seq | ATGTTTTTGCAGCTCAGCTATGCACTCAACTGTGCAACTGACAGTTTTGTTTTTATTTCAGAGGGAAAGGGAAGCTTACTTTGTTTTCTGAAAGCGAAAGGTTGGGCAAGCTCATTGAGTGTCGGTGGTTGCACTTATGGGACACAACGCTCCTCATATGCCTATATCTTTGAAATGTCTATCCGCCTTACTGATTCAGGACTGAAAAATCCCAAGGAGAATTGTATGTTTGACGTCCCTGTTTTATGCCATTTGATCCCTCCAGGAAAACCAGCTGCCATTCAATATGGCAATGGTTCAGTTGCTGGGTTTTTCAACGAGGATAGTGTTACAATAGGTGATCTGGTTGTGAAAGATCAGCAAGGCAAACTTTATGATTTGTTCGTTGTAACCACTCTGAGAATAGTTTTCAGTGAGGTAGCTGTCGATGTCAGAGCACCAAGTGCTTATGGATCTTACCTAAATGTTTGCCGGAGGTTGTTCATCGGTCACAACAATCCTCATCATGTTTTCATGTCAACTATTTTAGCCCTTGTTCCCATCAATTAG
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| Protein seq | MFLQLSYALNCATDSFVFISEGKGSLLCFLKAKGWASSLSVGGCTYGTQRSSYAYIFEMSIRLTDSGLKNPKENCMFDVPVLCHLIPPGKPAAIQYGNGSVAGFFNEDSVTIGDLVVKDQQGKLYDLFVVTTLRIVFSEVAVDVRAPSAYGSYLNVCRRLFIGHNNPHHVFMSTILALVPIN |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 7852733 | 7854911 | + | OsAzu_04g0004940.03 | OsAzu_04g0004940.01,OsAzu_04g0004940.03 | All |
| SE | Chr04 | 7852535 | 7854907 | + | OsAzu_04g0004940.03 | OsAzu_04g0004940.02,OsAzu_04g0004940.03 | All |
| A5 | Chr04 | 7852535 | 7852701 | + | OsAzu_04g0004940.01 | OsAzu_04g0004940.01,OsAzu_04g0004940.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g15550 | RBH | 2.846395 | 2.775370 | 0.760435 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0005580 | SBH | 0.067250 | 0.901504 | 1.691618 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0005190 | RBH | 2.018160 | 2.749015 | 12.257821 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0005010 | RBH | 0.000000 | 0.018597 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0005000 | RBH | 0.493003 | 0.281671 | 1.735155 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0004800 | RBH | 0.112630 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0004740 | RBH | 0.0 | 0.0 | 0.451123 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
