Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_01g0015980 | OGI:01049950 | 12/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr01:14083405-14084362 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGGCTGTCGAGGAGCTCACGCAGCTGTCGGAGTCGATGCGCCAGGTGGCGTCGCTGCTGGCCGACGACGACCCCTGTGACGACTCCACCCCACGCCGCCTCTCCACCTTCGTCAATGCCGTCGCGCTCGGCAACGTCGTAAGTATAGGCCACCGCCACCGCGATCCGCCCGCTCGCTCTCTCGTGTGCTCGCCCGATCTGATCCAGTTCTGATCTGCTCGTGCAGGGGGCGGGCAAGATGGCCGTGCTGAACAGCCTCATCGGCCACCCCATGCTGGTGAGCTCGTACTAATGGCCACCACCTTGCCCTTCTCCGCTCACAGCCGCGCACCCACTCACTGTAGCACACTGGGTGTAGGGAGCAGGTGATAGGCGAGGCGAGCAACCTCCTCCATGGCGCCGCCCCAGTGCCGATGAGCAGCGTCCTCCCTGCTGTTCGAGGTATTTTTCTACTGCTTAATCCGGATTTGCCTTGGTGGCACTGTTGGTTGCATCTTGGAGGGAGGGTCTGGTCACAAAATTGGTTCTTGGGGATTTTGCATGCATGCAGTGCTGATGAGATGGATGTGGCTGGATGTTGTTGGTGTGCGGTTGCTCCTATGCGGGAAGAGCTGCCAGCTGCAGTGGATGAAAGTAATATATGTGATAATTTACATTAGTTTGTTCCCTCCGGCACATGACTAAGTGATTGAGTACTGTAGTAGTATCACTTCTTGTTGGTGTCAGATTATATGTTTTTGCTAAATCTAAATTAACTATAGGATTGATCAACTTTGACTCTGTGAGTGTACAATTTGTAGGTTTAAACATTATAGTCCCAAGTGTAAAAATATGGTTTTGTTCAGAATTTTACTTGCTCACATAAATTTCGATTATGCACTTCAGATTTCTGACTTCACTTTTCCTGACCTGGGTTCCGATTATTTTGCTTTGTAGTAGTGATCATTTAGCTGGC
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| CDS seq | ATGGAGGCTGTCGAGGAGCTCACGCAGCTGTCGGAGTCGATGCGCCAGGTGGCGTCGCTGCTGGCCGACGACGACCCCTGTGACGACTCCACCCCACGCCGCCTCTCCACCTTCGTCAATGCCGTCGCGCTCGGCAACGTCGGGGCGGGCAAGATGGCCGTGCTGAACAGCCTCATCGGCCACCCCATGCTGGTGATAGGCGAGGCGAGCAACCTCCTCCATGGCGCCGCCCCAGTGCCGATGAGCAGCGTCCTCCCTGCTGTTCGAGTGCTGATGAGATGGATGTGGCTGGATGTTGTTGGTGTGCGGTTGCTCCTATGCGGGAAGAGCTGCCAGCTGCAGTGGATGAAAGTAATATATGTGATAATTTACATTAGTTTGTTCCCTCCGGCACATGACTAA
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| Protein seq | MEAVEELTQLSESMRQVASLLADDDPCDDSTPRRLSTFVNAVALGNVGAGKMAVLNSLIGHPMLVIGEASNLLHGAAPVPMSSVLPAVRVLMRWMWLDVVGVRLLLCGKSCQLQWMKVIYVIIYISLFPPAHD |
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| Function | Dynamin-2A [UniProtKB/Swiss-Prot:Q9SE83] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_01g0015980 | OsAzu_01g0015980.01 | Chr01 | 14083405 | 14084362 | + | NAM | ||
| CDS seq | ATGGAGGCTGTCGAGGAGCTCACGCAGCTGTCGGAGTCGATGCGCCAGGTGGCGTCGCTGCTGGCCGACGACGACCCCTGTGACGACTCCACCCCACGCCGCCTCTCCACCTTCGTCAATGCCGTCGCGCTCGGCAACGTCGGGGCGGGCAAGATGGCCGTGCTGAACAGCCTCATCGGCCACCCCATGCTGGTGATAGGCGAGGCGAGCAACCTCCTCCATGGCGCCGCCCCAGTGCCGATGAGCAGCGTCCTCCCTGCTGTTCGAGTGCTGATGAGATGGATGTGGCTGGATGTTGTTGGTGTGCGGTTGCTCCTATGCGGGAAGAGCTGCCAGCTGCAGTGGATGAAAGTAATATATGTGATAATTTACATTAGTTTGTTCCCTCCGGCACATGACTAA
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| Protein seq | MEAVEELTQLSESMRQVASLLADDDPCDDSTPRRLSTFVNAVALGNVGAGKMAVLNSLIGHPMLVIGEASNLLHGAAPVPMSSVLPAVRVLMRWMWLDVVGVRLLLCGKSCQLQWMKVIYVIIYISLFPPAHD |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0033580 | RBH | 1.527886 | 1.874379 | 8.047219 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0033350 | SBH | 5.220824 | 2.387488 | 7.767614 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0017070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0017250 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0017090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0017060 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0017300 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0017060 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016940 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G015560 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0015330 | RBH | 0.0 | 0.0 | 0.0 |
