Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0015330 | OGI:01049950 | 12/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:13523863-13524899 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgggtggggagcatcgcggcagcggcgggagcccccgatccgtcgagattcggcgcggggagagggtgtgggacgcgagtacaccggcgacgatggaggccgtcgaggagctcacgcagctgtcggagtcgatgcgccaggtggcgtcgctgctggccgacgacgaCccctgtgacgactccaCcccacgccgcctctccaccttcgtcaatgccgtcgcgctcggcaacgtcgtaagtataggccaccgccaccgcgatccgcccgctcgctctctagtgtgctcgcccgatctgatccagttctgatctgctcgtgcagggggcgggcaagatggccgtgctgaacagcctcatcggccAccccatgctggtgagctcgtactaatggccaccaccttgcccttctccgctcacagccgcgcacccactcactgtagcacacggggtgtagggagcaggtgataggcgaggcgagcaacctcctccatggcgccaccccagtgccgatgagcagcgtcctccctgctgttcgaggtatttttctactgcttaatccggatttgccttggtggcactgttggttgcatcttggagggagggtctggtcacaaaattggtTCttGgggattttgcatgcatgcagtgctgatgagatggatgtggctggatgttgttggtgtgcggttgctcctatgcgggaagagctgccagctgcagatgataatatatgtgataattacattagtttgttccctccggcacatgactaagtgattgagtactgtagtcttcttgttggtgtcagatTAtatgtttttgctaaatctAaattaactataggattgatcaactttgactctgtgagtgtacaatttgtaggtttaaacattatagtcccaagtgtaaaaatatggttttgttcagaattttacttgctcacataaatttcgattatgcacttcagatttctgacttcacttttcctgacctgggttccgattattttgctttgtagtagtgatcatttagctggc
More
|
||||||||||
| CDS seq | atgggtggggagcatcgcggcagcggcgggagcccccgatccgtcgagattcggcgcggggagagggtgtgggacgcgagtacaccggcgacgatggaggccgtcgaggagctcacgcagctgtcggagtcgatgcgccaggtggcgtcgctgctggccgacgacgaCccctgtgacgactccaCcccacgccgcctctccaccttcgtcaatgccgtcgcgctcggcaacgtcggggcgggcaagatggccgtgctgaacagcctcatcggccAccccatgctgcacacggggtgtagggagcaggtgataggcgaggcgagcaacctcctccatggcgccaccccagtgccgatgagcagcgtcctccctgctgttcgagtgctgatgagatggatgtggctggatgttgttggtgtgcggttgctcctatgcgggaagagctgccagctgcagatgataatatatgtgataattacattagtttgttccctccggcacatgactaagtga
More
|
||||||||||
| Protein seq | MGGEHRGSGGSPRSVEIRRGERVWDASTPATMEAVEELTQLSESMRQVASLLADDDPCDDSTPRRLSTFVNAVALGNVGAGKMAVLNSLIGHPMLHTGCREQVIGEASNLLHGATPVPMSSVLPAVRVLMRWMWLDVVGVRLLLCGKSCQLQMIIYVIITLVCSLRHMTK |
||||||||||
| Function | Dynamin-2B [UniProtKB/Swiss-Prot:Q9LQ55] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0015330 | OsNaBo_01g0015330.01 | Chr01 | 13523863 | 13524899 | + | NAM | ||
| CDS seq | atgggtggggagcatcgcggcagcggcgggagcccccgatccgtcgagattcggcgcggggagagggtgtgggacgcgagtacaccggcgacgatggaggccgtcgaggagctcacgcagctgtcggagtcgatgcgccaggtggcgtcgctgctggccgacgacgaCccctgtgacgactccaCcccacgccgcctctccaccttcgtcaatgccgtcgcgctcggcaacgtcggggcgggcaagatggccgtgctgaacagcctcatcggccAccccatgctgcacacggggtgtagggagcaggtgataggcgaggcgagcaacctcctccatggcgccaccccagtgccgatgagcagcgtcctccctgctgttcgagtgctgatgagatggatgtggctggatgttgttggtgtgcggttgctcctatgcgggaagagctgccagctgcagatgataatatatgtgataattacattagtttgttccctccggcacatgactaagtga
More
|
|||||||
| Protein seq | MGGEHRGSGGSPRSVEIRRGERVWDASTPATMEAVEELTQLSESMRQVASLLADDDPCDDSTPRRLSTFVNAVALGNVGAGKMAVLNSLIGHPMLHTGCREQVIGEASNLLHGATPVPMSSVLPAVRVLMRWMWLDVVGVRLLLCGKSCQLQMIIYVIITLVCSLRHMTK |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0732200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015980 | RBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0033280 | SBH | 0.130554 | 2.375718 | 2.015102 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004680 | SBH | 2.259368 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0017070 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0015320 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0017090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0017060 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0017300 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0017060 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016940 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G015560 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0032840 | SBH | 0.0 | 0.0 | 0.0 |
