Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_11g0024070 OGI:11010520 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr11:28538372-28541098
Gene Symbol XA3, Xa-3, Xa3 (Xa4b, Xa6, Xa9, Xa w), Xa3, Xaw, Xa4-b, XA26, Xa26(t), Xa26(t)*, Xa26, RKb, MRKb, MRKB, TRKb, Xa3/Xa26
DNA seq

ATGCCAATCCTCCAACACCTTAACTTGCAGGCCAATAACTTAACTGGGGCGGTGCCACCAGCCATCTTCAACATGTCTAAATTAAGTACCATTTCTCTTATATCGAATGGTTTAACTGGCCCTATCCCTGGTAATACAAGTTCCAGCCTCCCAGTTCTACGATGGTTCGCCATCAGTAAAAACAATTTCTTTGGTCAGATTCCACTGGGGCTCACAGCGTGTCCATACCTCCAAGTTATTGCCATGCCTTATAATTTATTCGAGGGTGTTTTGCCACCATGGCTGGGCAGGTTGACCAATCTTGATGCCATCTCCTTGGGTGGGAATAACTTTGATGCTGGCCCCATCCCAACTAAACTTAGCAACCTCACCATGCTGACAGTCTTAGATTTGACGACGTGCAACCTAACAGGAAACATCCCTACAGATATTGGGCACCTAGGCCAACTTTCATGGTTGCATCTTGCGATGAATCAACTAACAGGACCTATTCCTGCTTCTCTTGGCAACCTTTCATCGTTGGCAATCCTGCTACTGAAAGGAAACTTGCTGGATGGATCATTACTATCGACAGTTGATAGCATGAACTCACTAACGGCAGTTGATGTTACTAAAAACAATCTACACGGCGATCTCAACTTCCTTTCTACTGTTTCCAATTGTAGAAAGCTTTCTACCCTTCAAATGGACCTGAATTATATCACCGGAATCCTCCCAGACTATGTTGGGAACCTGTCGTCACAGCTGAAATGGTTCACGTTATCTAACAACAAGTTAACTGGCACGCTTCCAGCTACCATTTCAAATTTAACTGCTCTTGAGGTGATAGATCTTTCACATAACCAACTGCGCAATGCAATTCCAGAATCAATCATGACGATTGAGAATCTCCAATGGCTTGACCTAAGTGGAAATAGCTTGTCTGGCTTCATCCCATCGAGTACTGCACTTCTAAGGAACATTGTAAAACTGTTCCTTGAAAGCAACGAAATTTCTGGCTCCATACCAAAGGACATGAGGAACCTCACTAATCTAGAGCACCTTCTATTGTCTGATAACAAATTAACGTCAACTATACCACCAAGCTTATTTCATCTTGATAAAATCGTCAGGCTAGATCTTTCTCGAAACTTCTTGAGTGGTGCACTGCCGGTTGATGTAGGGTATTTGAAGCAAATTACCATCATGGATCTCTCTGACAACCACTTTTCTGGTAGAATCCCATATTCGACAGGACAACTTCAGATGTTAACACACCTGAATCTATCAGCTAACGGATTCTATGATTCTGTTCCAGACTCTTTTGGTAATTTAACTGGCTTGCAAACTTTGGACATATCCCATAACAGTATTTCTGGTACCATCCCAAACTACTTGGCTAATTTTACGACCCTTGTTAGCTTGAACCTATCTTTCAACAAACTACATGGTCAAATACCGGAAGGAGGTGTCTTTGCAAACATCACTTTACAATACTTGGTGGGGAACTCAGGGCTATGTGGTGCTGCCCGTTTAGGATTCCCACCATGCCAAACCACCTCCCCCAACAGAAATAATGGTCATATGCTAAAATACTTGCTACCTACTATAATCATTGTAGTTGGAGTTGTAGCTTGTTGCCTGTATGTAATGATTAGAAAGAAAGCTAACCATCAAAATACTTCTGCTGGTAAGCCTGACCTTATCAGCCATCAATTGCTCTCCTATCATGAGCTTCGTGCAACCGATGATTTCAGTGATGATAACATGTTGGGCTTCGGAAGCTTTGGAAAAGTTTTTAGGGGACAATTGAGCAACGGTATGGTGGTTGCCATAAAAGTTATACACCAGCATCTGGAACATGCCATGAGAAGCTTTGACACCAAGTGTCACGTGCTCCGAATGGCTCGACATCGCAACCTGATAAAGATTCTGAACACTTGTTCCAACCTGGACTTTAAAGCACTGGTACTTCAGTACATGCCCAAGGGTAGCTTAGAAGCACTCCTGCACTCAGAACAAGGGAAGCAATTAGGCTTTCTCGAGAGGTTGGATATTATGCTAGATGTGTCAATGGCAATGGAATACCTGCATCATGAGCACTATGAGGTGGTCTTACACTGCGATTTGAAGCCTAGCAACGTACTATTTGACGATGATATGACGGCACATGTGGCAGACTTTGGTATTGCAAGGTTGTTGTTAGGTGATGACAACTCCATGATCTCAGCTAGCATGCCAGGAACAGTTGGGTACATGGCACCAGGTACTTAATAGTTTTTCTTGTCTTTCTCAAACTTTGCCCGATCTTTTATTATTATTGAGTAGATAGGGTGCAACTAATTTTTGGTATCTAATTTTTCTTGAGCAGAGTATGGGACTCTAGGAAAAGCGTCACGGAAGAGTGATGTGTTCAGTTACGGCATCATGCTGCTTGAAGTGTTCACTGCGAAAAGACCCACAGATGCTATGTTTGTGGGAGAACTGAACATCAGGCAGTGGGTTCAACAGGCGTTTCCTGCAGAGCTTGTCCATGTGGTGGACTGCCAACTTCTACAGAATGGTTCTTCTTCTTCTTCAAGTAACATGCATGGCTTCCTTGTGCCAGTGTTCGAGCTGGGTTTGCTCTGTTCGGCTCACTCCCCAGAGCAAAGGATGGCGATGAGTGATGTGGTCGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATTGATGGCAACCACAGTGAGCGTTGTGCAGCAGTGA

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CDS seq

ATGCCAATCCTCCAACACCTTAACTTGCAGGCCAATAACTTAACTGGGGCGGTGCCACCAGCCATCTTCAACATGTCTAAATTAAGTACCATTTCTCTTATATCGAATGGTTTAACTGGCCCTATCCCTGGTAATACAAGTTCCAGCCTCCCAGTTCTACGATGGTTCGCCATCAGTAAAAACAATTTCTTTGGTCAGATTCCACTGGGGCTCACAGCGTGTCCATACCTCCAAGTTATTGCCATGCCTTATAATTTATTCGAGGGTGTTTTGCCACCATGGCTGGGCAGGTTGACCAATCTTGATGCCATCTCCTTGGGTGGGAATAACTTTGATGCTGGCCCCATCCCAACTAAACTTAGCAACCTCACCATGCTGACAGTCTTAGATTTGACGACGTGCAACCTAACAGGAAACATCCCTACAGATATTGGGCACCTAGGCCAACTTTCATGGTTGCATCTTGCGATGAATCAACTAACAGGACCTATTCCTGCTTCTCTTGGCAACCTTTCATCGTTGGCAATCCTGCTACTGAAAGGAAACTTGCTGGATGGATCATTACTATCGACAGTTGATAGCATGAACTCACTAACGGCAGTTGATGTTACTAAAAACAATCTACACGGCGATCTCAACTTCCTTTCTACTGTTTCCAATTGTAGAAAGCTTTCTACCCTTCAAATGGACCTGAATTATATCACCGGAATCCTCCCAGACTATGTTGGGAACCTGTCGTCACAGCTGAAATGGTTCACGTTATCTAACAACAAGTTAACTGGCACGCTTCCAGCTACCATTTCAAATTTAACTGCTCTTGAGGTGATAGATCTTTCACATAACCAACTGCGCAATGCAATTCCAGAATCAATCATGACGATTGAGAATCTCCAATGGCTTGACCTAAGTGGAAATAGCTTGTCTGGCTTCATCCCATCGAGTACTGCACTTCTAAGGAACATTGTAAAACTGTTCCTTGAAAGCAACGAAATTTCTGGCTCCATACCAAAGGACATGAGGAACCTCACTAATCTAGAGCACCTTCTATTGTCTGATAACAAATTAACGTCAACTATACCACCAAGCTTATTTCATCTTGATAAAATCGTCAGGCTAGATCTTTCTCGAAACTTCTTGAGTGGTGCACTGCCGGTTGATGTAGGGTATTTGAAGCAAATTACCATCATGGATCTCTCTGACAACCACTTTTCTGGTAGAATCCCATATTCGACAGGACAACTTCAGATGTTAACACACCTGAATCTATCAGCTAACGGATTCTATGATTCTGTTCCAGACTCTTTTGGTAATTTAACTGGCTTGCAAACTTTGGACATATCCCATAACAGTATTTCTGGTACCATCCCAAACTACTTGGCTAATTTTACGACCCTTGTTAGCTTGAACCTATCTTTCAACAAACTACATGGTCAAATACCGGAAGGAGGTGTCTTTGCAAACATCACTTTACAATACTTGGTGGGGAACTCAGGGCTATGTGGTGCTGCCCGTTTAGGATTCCCACCATGCCAAACCACCTCCCCCAACAGAAATAATGGTCATATGCTAAAATACTTGCTACCTACTATAATCATTGTAGTTGGAGTTGTAGCTTGTTGCCTGTATGTAATGATTAGAAAGAAAGCTAACCATCAAAATACTTCTGCTGGTAAGCCTGACCTTATCAGCCATCAATTGCTCTCCTATCATGAGCTTCGTGCAACCGATGATTTCAGTGATGATAACATGTTGGGCTTCGGAAGCTTTGGAAAAGTTTTTAGGGGACAATTGAGCAACGGTATGGTGGTTGCCATAAAAGTTATACACCAGCATCTGGAACATGCCATGAGAAGCTTTGACACCAAGTGTCACGTGCTCCGAATGGCTCGACATCGCAACCTGATAAAGATTCTGAACACTTGTTCCAACCTGGACTTTAAAGCACTGGTACTTCAGTACATGCCCAAGGGTAGCTTAGAAGCACTCCTGCACTCAGAACAAGGGAAGCAATTAGGCTTTCTCGAGAGGTTGGATATTATGCTAGATGTGTCAATGGCAATGGAATACCTGCATCATGAGCACTATGAGGTGGTCTTACACTGCGATTTGAAGCCTAGCAACGTACTATTTGACGATGATATGACGGCACATGTGGCAGACTTTGGTATTGCAAGGTTGTTGTTAGGTGATGACAACTCCATGATCTCAGCTAGCATGCCAGGAACAGTTGGGTACATGGCACCAGAGTATGGGACTCTAGGAAAAGCGTCACGGAAGAGTGATGTGTTCAGTTACGGCATCATGCTGCTTGAAGTGTTCACTGCGAAAAGACCCACAGATGCTATGTTTGTGGGAGAACTGAACATCAGGCAGTGGGTTCAACAGGCGTTTCCTGCAGAGCTTGTCCATGTGGTGGACTGCCAACTTCTACAGAATGGTTCTTCTTCTTCTTCAAGTAACATGCATGGCTTCCTTGTGCCAGTGTTCGAGCTGGGTTTGCTCTGTTCGGCTCACTCCCCAGAGCAAAGGATGGCGATGAGTGATGTGGTCGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATTGATGGCAACCACAGTGAGCGTTGTGCAGCAGTGA

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Protein seq

MPILQHLNLQANNLTGAVPPAIFNMSKLSTISLISNGLTGPIPGNTSSSLPVLRWFAISKNNFFGQIPLGLTACPYLQVIAMPYNLFEGVLPPWLGRLTNLDAISLGGNNFDAGPIPTKLSNLTMLTVLDLTTCNLTGNIPTDIGHLGQLSWLHLAMNQLTGPIPASLGNLSSLAILLLKGNLLDGSLLSTVDSMNSLTAVDVTKNNLHGDLNFLSTVSNCRKLSTLQMDLNYITGILPDYVGNLSSQLKWFTLSNNKLTGTLPATISNLTALEVIDLSHNQLRNAIPESIMTIENLQWLDLSGNSLSGFIPSSTALLRNIVKLFLESNEISGSIPKDMRNLTNLEHLLLSDNKLTSTIPPSLFHLDKIVRLDLSRNFLSGALPVDVGYLKQITIMDLSDNHFSGRIPYSTGQLQMLTHLNLSANGFYDSVPDSFGNLTGLQTLDISHNSISGTIPNYLANFTTLVSLNLSFNKLHGQIPEGGVFANITLQYLVGNSGLCGAARLGFPPCQTTSPNRNNGHMLKYLLPTIIIVVGVVACCLYVMIRKKANHQNTSAGKPDLISHQLLSYHELRATDDFSDDNMLGFGSFGKVFRGQLSNGMVVAIKVIHQHLEHAMRSFDTKCHVLRMARHRNLIKILNTCSNLDFKALVLQYMPKGSLEALLHSEQGKQLGFLERLDIMLDVSMAMEYLHHEHYEVVLHCDLKPSNVLFDDDMTAHVADFGIARLLLGDDNSMISASMPGTVGYMAPEYGTLGKASRKSDVFSYGIMLLEVFTAKRPTDAMFVGELNIRQWVQQAFPAELVHVVDCQLLQNGSSSSSSNMHGFLVPVFELGLLCSAHSPEQRMAMSDVVVTLKKIRKDYVKLMATTVSVVQQ

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_11g0024070 OsARC_11g0024070.01 Chr11 28538372 28541098 + NAM
CDS seq

ATGCCAATCCTCCAACACCTTAACTTGCAGGCCAATAACTTAACTGGGGCGGTGCCACCAGCCATCTTCAACATGTCTAAATTAAGTACCATTTCTCTTATATCGAATGGTTTAACTGGCCCTATCCCTGGTAATACAAGTTCCAGCCTCCCAGTTCTACGATGGTTCGCCATCAGTAAAAACAATTTCTTTGGTCAGATTCCACTGGGGCTCACAGCGTGTCCATACCTCCAAGTTATTGCCATGCCTTATAATTTATTCGAGGGTGTTTTGCCACCATGGCTGGGCAGGTTGACCAATCTTGATGCCATCTCCTTGGGTGGGAATAACTTTGATGCTGGCCCCATCCCAACTAAACTTAGCAACCTCACCATGCTGACAGTCTTAGATTTGACGACGTGCAACCTAACAGGAAACATCCCTACAGATATTGGGCACCTAGGCCAACTTTCATGGTTGCATCTTGCGATGAATCAACTAACAGGACCTATTCCTGCTTCTCTTGGCAACCTTTCATCGTTGGCAATCCTGCTACTGAAAGGAAACTTGCTGGATGGATCATTACTATCGACAGTTGATAGCATGAACTCACTAACGGCAGTTGATGTTACTAAAAACAATCTACACGGCGATCTCAACTTCCTTTCTACTGTTTCCAATTGTAGAAAGCTTTCTACCCTTCAAATGGACCTGAATTATATCACCGGAATCCTCCCAGACTATGTTGGGAACCTGTCGTCACAGCTGAAATGGTTCACGTTATCTAACAACAAGTTAACTGGCACGCTTCCAGCTACCATTTCAAATTTAACTGCTCTTGAGGTGATAGATCTTTCACATAACCAACTGCGCAATGCAATTCCAGAATCAATCATGACGATTGAGAATCTCCAATGGCTTGACCTAAGTGGAAATAGCTTGTCTGGCTTCATCCCATCGAGTACTGCACTTCTAAGGAACATTGTAAAACTGTTCCTTGAAAGCAACGAAATTTCTGGCTCCATACCAAAGGACATGAGGAACCTCACTAATCTAGAGCACCTTCTATTGTCTGATAACAAATTAACGTCAACTATACCACCAAGCTTATTTCATCTTGATAAAATCGTCAGGCTAGATCTTTCTCGAAACTTCTTGAGTGGTGCACTGCCGGTTGATGTAGGGTATTTGAAGCAAATTACCATCATGGATCTCTCTGACAACCACTTTTCTGGTAGAATCCCATATTCGACAGGACAACTTCAGATGTTAACACACCTGAATCTATCAGCTAACGGATTCTATGATTCTGTTCCAGACTCTTTTGGTAATTTAACTGGCTTGCAAACTTTGGACATATCCCATAACAGTATTTCTGGTACCATCCCAAACTACTTGGCTAATTTTACGACCCTTGTTAGCTTGAACCTATCTTTCAACAAACTACATGGTCAAATACCGGAAGGAGGTGTCTTTGCAAACATCACTTTACAATACTTGGTGGGGAACTCAGGGCTATGTGGTGCTGCCCGTTTAGGATTCCCACCATGCCAAACCACCTCCCCCAACAGAAATAATGGTCATATGCTAAAATACTTGCTACCTACTATAATCATTGTAGTTGGAGTTGTAGCTTGTTGCCTGTATGTAATGATTAGAAAGAAAGCTAACCATCAAAATACTTCTGCTGGTAAGCCTGACCTTATCAGCCATCAATTGCTCTCCTATCATGAGCTTCGTGCAACCGATGATTTCAGTGATGATAACATGTTGGGCTTCGGAAGCTTTGGAAAAGTTTTTAGGGGACAATTGAGCAACGGTATGGTGGTTGCCATAAAAGTTATACACCAGCATCTGGAACATGCCATGAGAAGCTTTGACACCAAGTGTCACGTGCTCCGAATGGCTCGACATCGCAACCTGATAAAGATTCTGAACACTTGTTCCAACCTGGACTTTAAAGCACTGGTACTTCAGTACATGCCCAAGGGTAGCTTAGAAGCACTCCTGCACTCAGAACAAGGGAAGCAATTAGGCTTTCTCGAGAGGTTGGATATTATGCTAGATGTGTCAATGGCAATGGAATACCTGCATCATGAGCACTATGAGGTGGTCTTACACTGCGATTTGAAGCCTAGCAACGTACTATTTGACGATGATATGACGGCACATGTGGCAGACTTTGGTATTGCAAGGTTGTTGTTAGGTGATGACAACTCCATGATCTCAGCTAGCATGCCAGGAACAGTTGGGTACATGGCACCAGAGTATGGGACTCTAGGAAAAGCGTCACGGAAGAGTGATGTGTTCAGTTACGGCATCATGCTGCTTGAAGTGTTCACTGCGAAAAGACCCACAGATGCTATGTTTGTGGGAGAACTGAACATCAGGCAGTGGGTTCAACAGGCGTTTCCTGCAGAGCTTGTCCATGTGGTGGACTGCCAACTTCTACAGAATGGTTCTTCTTCTTCTTCAAGTAACATGCATGGCTTCCTTGTGCCAGTGTTCGAGCTGGGTTTGCTCTGTTCGGCTCACTCCCCAGAGCAAAGGATGGCGATGAGTGATGTGGTCGTGACACTGAAGAAGATTAGGAAGGACTATGTCAAATTGATGGCAACCACAGTGAGCGTTGTGCAGCAGTGA

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Protein seq

MPILQHLNLQANNLTGAVPPAIFNMSKLSTISLISNGLTGPIPGNTSSSLPVLRWFAISKNNFFGQIPLGLTACPYLQVIAMPYNLFEGVLPPWLGRLTNLDAISLGGNNFDAGPIPTKLSNLTMLTVLDLTTCNLTGNIPTDIGHLGQLSWLHLAMNQLTGPIPASLGNLSSLAILLLKGNLLDGSLLSTVDSMNSLTAVDVTKNNLHGDLNFLSTVSNCRKLSTLQMDLNYITGILPDYVGNLSSQLKWFTLSNNKLTGTLPATISNLTALEVIDLSHNQLRNAIPESIMTIENLQWLDLSGNSLSGFIPSSTALLRNIVKLFLESNEISGSIPKDMRNLTNLEHLLLSDNKLTSTIPPSLFHLDKIVRLDLSRNFLSGALPVDVGYLKQITIMDLSDNHFSGRIPYSTGQLQMLTHLNLSANGFYDSVPDSFGNLTGLQTLDISHNSISGTIPNYLANFTTLVSLNLSFNKLHGQIPEGGVFANITLQYLVGNSGLCGAARLGFPPCQTTSPNRNNGHMLKYLLPTIIIVVGVVACCLYVMIRKKANHQNTSAGKPDLISHQLLSYHELRATDDFSDDNMLGFGSFGKVFRGQLSNGMVVAIKVIHQHLEHAMRSFDTKCHVLRMARHRNLIKILNTCSNLDFKALVLQYMPKGSLEALLHSEQGKQLGFLERLDIMLDVSMAMEYLHHEHYEVVLHCDLKPSNVLFDDDMTAHVADFGIARLLLGDDNSMISASMPGTVGYMAPEYGTLGKASRKSDVFSYGIMLLEVFTAKRPTDAMFVGELNIRQWVQQAFPAELVHVVDCQLLQNGSSSSSSNMHGFLVPVFELGLLCSAHSPEQRMAMSDVVVTLKKIRKDYVKLMATTVSVVQQ

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0692500 SBH 0.000000 0.452390 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g47210 SBH 0.0 0.063715 0.058118
Nipponbare | IRGSP 1.0 | RAP-db Os11g0692500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0017830 RBH 0.128877 6.788608 1.696541
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0024560 SBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0017660 SBH 0.000000 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0023880 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0024390 SBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0444200 RBH 0.024749 0.065174 0.025844
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0024800 SBH 0.009890 0.000000 0.012598
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0442400 SBH 0.3193365 0 0.811963
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0024650 SBH 0.008922 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0024760 RBH 0.027641 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0024060 SBH 0.000000 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0023840 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0024320 SBH 0.053511 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G017780 SBH 0.0 0.712022 0.345214
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0024480 SBH 0.327320 16.035185 3.416424
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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