Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsARC_08g0008540		OGI:08025640 \| 16/16			ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)			Chr08:9486160-9489564		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		-
DNA seq		TATCACCACACCGCAACCTCTCAACCTCCTTCCTCTAACCATGGCAATCAAGATGACATGGCAACTTTGGTTGCTCTCTCTTCTCACACATGCCATCCTATTGTTCACAGCCAGCTCTCAGTCCATCAATGGAGATGACCTCTCAGCACTCCTGTCATTCAAATCCCTCATAAGGAACGACCCAAGAGAGGTGCTGTCCTCTTGGGACGCCAGCAGCAACACTACCAACATGACAACACCTGTCTTCTGCCGATGGACCGGCGTTTCCTGCAACGATCGCCGGCATCCAGGTCGTGTTACCACCCTCAATCTGAGCGATGCCGGCCTAGTCGGCACCATATCCCAGCAGCTTGGCAACCTGACCCACCTCCATGTCCTTGATCTGTCAGCCAACAATCTTGATGGTGATATCCCAACCAGCCTTGGCGGCTGTCCAAAGCTTCGTGCCATGAACTTGAGCAGGAACCATCTGTCAGGTACCATCCCTGTTGATCTTGGAAAGTTATCAAAACTTGCGGTTTTCGACGTTGGCCACAACAATCTTACAGGTGATATTCCCAAGTCACTCTCCAACCTCACAACACTTACAAAGTTTATCGTCGAGAGGAACTTCATCTATGGCCAAGATTTGAGCTGGATGGGTAACTTGACAACATTGACACACTTTGTTCTTGAAGGCAACATTTTCACTGGTAACATCCCTGAAACTTTTGGTAAGATGGTTAGGCTTATTTACTTCAGTGTCCAAGATAATCAGTTAGAAGGCCATGTTCCTCTATCAATCTTCAATATTTCTTCCATTAGATTCTTTGATCTTGGCTTCAATAGATTGTCAGGATCACTTCCACTCGATGTTGGCGTTAAGCTTCCAAGGATAAATCGTTTTAACACACTTTTTAACAGTTTTGAGGGTATCCTACCACCCACCTTTTCAAATGCATCTGCACTTGAGCTATTGCTTCTTCATGGAAACAAATACCATGGTTTGATTCCTAGGGAAATTGGCATACATGGCAACCTAAAGGTATTGATGTTAGGAGACAATGCACTCCAAGCCACAAAGTCTAGTGATTGGGAATTTTTTACATCATTGACCAACTGTAGTAGCTTGCGATTTCTAGATATTGGAAAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCAATGAGCTGTCATGGATTGACCTAGGTGGCAACCAAATAATTGGGACCATACCTGAAGATTTATGGAAGTTTAACAAACTTACTTCTGTCAACCTGTCATATAACCTCTTCACAGGAACATTACCTCCTGATATTGGCGGGCTTCCAAGGCTCAATTCTTTCTACATATCCCATAATAGAATCGATGGGAAAATTCCTCAGTCATTAGGAAATATCACACAATTGAGCTATCTGTCTCTGTCTAATAATTTTCTAGATGGCAGCATTCCAACTAGCCTTGGCAACTTCACAAAACTTGAAGTCATGGATCTTTCTTGTAACAGCTTGACAGGTCAAATTCCACAAGAAATACTTGCAATAACGTCCCTTACCAGACGCCTAAACCTCTCCAACAATGCTCTAATTGGCTCCATTCCAACACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATATGTCAATGAATAAGCTGTCTGGTGGAATCCCAGAAGCTATTGGGAGCTGTGTCCAATTGAGTTCCCTAAATTTTCAAGGAAATCTTCTCCAAGGACAAATCCCAAAAAGCCTAAACAATTTGAGGAGCCTTCAAATCCTTGATCTCTCTAAGAACAGCTTGGAAGGTCGCATACCAGAATTTCTAGCGAACTTCACGTTTCTAACTAATCTAAACCTCTCCTTCAACAAACTATCTGGCCCAGTTCCAAATACAGGGATTTTTCGTAATGTCACTATAGTGTTACTCTTAGGAAATAAAATGTTATGTGGTGGCCCTCCATACATGCAATTCCCTTCATGCTCATATGAAGATTCTGACCAGGCTTCAGGGCATCGACTTCATGTCTTAATCTTTTGCATTGTTGGAACTTTAATTTCCTCTATGTGTTGCATGACTGCATACTGCTTCATTAAGAGAAAGATGAAACTGAATGTTGTTGATAATGAGAACCTATTTCTCAATGAGACAAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCAATTCATTCTCGCCGGCAAATTTGATCGGTTCGGGAAGCTTTGGCCATGTATACATTGGAAATTTAATTATTGATCAGAATCTAGTGCCAGTTGCAATCAAGGTTCTTAATCTTAGCCAACGAGGAGCCAGTAGAAGCTTTTTGACCGAGTGTGACGCTCTTAGGAGAATTCGACACCGGAAACTTGTCAAGGTGATCACCGTCTGTAGTGGATCAGACCAAAATGGCGACGAATTCAAGGCACTTGTCCTAGAATTTATTTGCAATGGAAGTTTAGATGAGTGGCTTCATGCAAACACGACAGCAGTTAGAAGAAGCTACACAAGGATAAATTTGATGAAAAGGCTGCATATTGCTCTTGATGTTGCAGATGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTCTAGACGATGACCTGGTGGCGCATGTTACGGACTTTGGTCTAGCGAGGATAATGAATATTGCTGAACCGTTCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGGTAAGTGGCTATTATTTAATTCAACTATGTTAGCATCTCATTAATTATTTCCGTTCTGCATTTTACTAGTTTAACAAAATGATAAGATATTATTTTACTGTGACTAAAGATGCAAAAACAAAATGTAATATTGATATTATATTTGACTGATGAATTGTTAGTGTGGGATCCACCTTTTACCCCCCTAATCAAACTTTATTTTATATATATGTTTTCAGAATATGGCTCCGGATCTCAGGTCTCCATGGATGGTGACATATATAGCTATGGGGTGCTGTTATTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTAACTATGGTACAACAAGTCTTGTCGACTATGTCAAGGCAGCCTATCCTAACAATATTCTGGAAATACTGGATGCTAGCGCAACCTACAATGGAAACACCCAAGATATCATAGAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGGATGAAGATGAATGATGTAGTCAAGGAATTGAATGCTATAATTAAGACATACTCAGCACATACATATTCCTGATGATGAATTTCGCGCAACGAAGTAATCTGGTTAAGCAATGATATGTTACTAGATTTGATTGTCTGCTTGAGAAGTTGTTACCTACAG More
CDS seq		ATGGCAATCAAGATGACATGGCAACTTTGGTTGCTCTCTCTTCTCACACATGCCATCCTATTGTTCACAGCCAGCTCTCAGTCCATCAATGGAGATGACCTCTCAGCACTCCTGTCATTCAAATCCCTCATAAGGAACGACCCAAGAGAGGTGCTGTCCTCTTGGGACGCCAGCAGCAACACTACCAACATGACAACACCTGTCTTCTGCCGATGGACCGGCGTTTCCTGCAACGATCGCCGGCATCCAGGTCGTGTTACCACCCTCAATCTGAGCGATGCCGGCCTAGTCGGCACCATATCCCAGCAGCTTGGCAACCTGACCCACCTCCATGTCCTTGATCTGTCAGCCAACAATCTTGATGGTGATATCCCAACCAGCCTTGGCGGCTGTCCAAAGCTTCGTGCCATGAACTTGAGCAGGAACCATCTGTCAGGTACCATCCCTGTTGATCTTGGAAAGTTATCAAAACTTGCGGTTTTCGACGTTGGCCACAACAATCTTACAGGTGATATTCCCAAGTCACTCTCCAACCTCACAACACTTACAAAGTTTATCGTCGAGAGGAACTTCATCTATGGCCAAGATTTGAGCTGGATGGGTAACTTGACAACATTGACACACTTTGTTCTTGAAGGCAACATTTTCACTGGTAACATCCCTGAAACTTTTGGTAAGATGGTTAGGCTTATTTACTTCAGTGTCCAAGATAATCAGTTAGAAGGCCATGTTCCTCTATCAATCTTCAATATTTCTTCCATTAGATTCTTTGATCTTGGCTTCAATAGATTGTCAGGATCACTTCCACTCGATGTTGGCGTTAAGCTTCCAAGGATAAATCGTTTTAACACACTTTTTAACAGTTTTGAGGGTATCCTACCACCCACCTTTTCAAATGCATCTGCACTTGAGCTATTGCTTCTTCATGGAAACAAATACCATGGTTTGATTCCTAGGGAAATTGGCATACATGGCAACCTAAAGGTATTGATGTTAGGAGACAATGCACTCCAAGCCACAAAGTCTAGTGATTGGGAATTTTTTACATCATTGACCAACTGTAGTAGCTTGCGATTTCTAGATATTGGAAAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCAATGAGCTGTCATGGATTGACCTAGGTGGCAACCAAATAATTGGGACCATACCTGAAGATTTATGGAAGTTTAACAAACTTACTTCTGTCAACCTGTCATATAACCTCTTCACAGGAACATTACCTCCTGATATTGGCGGGCTTCCAAGGCTCAATTCTTTCTACATATCCCATAATAGAATCGATGGGAAAATTCCTCAGTCATTAGGAAATATCACACAATTGAGCTATCTGTCTCTGTCTAATAATTTTCTAGATGGCAGCATTCCAACTAGCCTTGGCAACTTCACAAAACTTGAAGTCATGGATCTTTCTTGTAACAGCTTGACAGGTCAAATTCCACAAGAAATACTTGCAATAACGTCCCTTACCAGACGCCTAAACCTCTCCAACAATGCTCTAATTGGCTCCATTCCAACACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATATGTCAATGAATAAGCTGTCTGGTGGAATCCCAGAAGCTATTGGGAGCTGTGTCCAATTGAGTTCCCTAAATTTTCAAGGAAATCTTCTCCAAGGACAAATCCCAAAAAGCCTAAACAATTTGAGGAGCCTTCAAATCCTTGATCTCTCTAAGAACAGCTTGGAAGGTCGCATACCAGAATTTCTAGCGAACTTCACGTTTCTAACTAATCTAAACCTCTCCTTCAACAAACTATCTGGCCCAGTTCCAAATACAGGGATTTTTCGTAATGTCACTATAGTGTTACTCTTAGGAAATAAAATGTTATGTGGTGGCCCTCCATACATGCAATTCCCTTCATGCTCATATGAAGATTCTGACCAGGCTTCAGGGCATCGACTTCATGTCTTAATCTTTTGCATTGTTGGAACTTTAATTTCCTCTATGTGTTGCATGACTGCATACTGCTTCATTAAGAGAAAGATGAAACTGAATGTTGTTGATAATGAGAACCTATTTCTCAATGAGACAAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCAATTCATTCTCGCCGGCAAATTTGATCGGTTCGGGAAGCTTTGGCCATGTATACATTGGAAATTTAATTATTGATCAGAATCTAGTGCCAGTTGCAATCAAGGTTCTTAATCTTAGCCAACGAGGAGCCAGTAGAAGCTTTTTGACCGAGTGTGACGCTCTTAGGAGAATTCGACACCGGAAACTTGTCAAGGTGATCACCGTCTGTAGTGGATCAGACCAAAATGGCGACGAATTCAAGGCACTTGTCCTAGAATTTATTTGCAATGGAAGTTTAGATGAGTGGCTTCATGCAAACACGACAGCAGTTAGAAGAAGCTACACAAGGATAAATTTGATGAAAAGGCTGCATATTGCTCTTGATGTTGCAGATGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTCTAGACGATGACCTGGTGGCGCATGTTACGGACTTTGGTCTAGCGAGGATAATGAATATTGCTGAACCGTTCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGAATATGGCTCCGGATCTCAGGTCTCCATGGATGGTGACATATATAGCTATGGGGTGCTGTTATTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTAACTATGGTACAACAAGTCTTGTCGACTATGTCAAGGCAGCCTATCCTAACAATATTCTGGAAATACTGGATGCTAGCGCAACCTACAATGGAAACACCCAAGATATCATAGAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGGATGAAGATGAATGATGTAGTCAAGGAATTGAATGCTATAATTAAGACATACTCAGCACATACATATTCCTGA More
Protein seq		MAIKMTWQLWLLSLLTHAILLFTASSQSINGDDLSALLSFKSLIRNDPREVLSSWDASSNTTNMTTPVFCRWTGVSCNDRRHPGRVTTLNLSDAGLVGTISQQLGNLTHLHVLDLSANNLDGDIPTSLGGCPKLRAMNLSRNHLSGTIPVDLGKLSKLAVFDVGHNNLTGDIPKSLSNLTTLTKFIVERNFIYGQDLSWMGNLTTLTHFVLEGNIFTGNIPETFGKMVRLIYFSVQDNQLEGHVPLSIFNISSIRFFDLGFNRLSGSLPLDVGVKLPRINRFNTLFNSFEGILPPTFSNASALELLLLHGNKYHGLIPREIGIHGNLKVLMLGDNALQATKSSDWEFFTSLTNCSSLRFLDIGKNNLVGAMPINIANLSNELSWIDLGGNQIIGTIPEDLWKFNKLTSVNLSYNLFTGTLPPDIGGLPRLNSFYISHNRIDGKIPQSLGNITQLSYLSLSNNFLDGSIPTSLGNFTKLEVMDLSCNSLTGQIPQEILAITSLTRRLNLSNNALIGSIPTQIGLLNSLVKMDMSMNKLSGGIPEAIGSCVQLSSLNFQGNLLQGQIPKSLNNLRSLQILDLSKNSLEGRIPEFLANFTFLTNLNLSFNKLSGPVPNTGIFRNVTIVLLLGNKMLCGGPPYMQFPSCSYEDSDQASGHRLHVLIFCIVGTLISSMCCMTAYCFIKRKMKLNVVDNENLFLNETNERISYAELQAATNSFSPANLIGSGSFGHVYIGNLIIDQNLVPVAIKVLNLSQRGASRSFLTECDALRRIRHRKLVKVITVCSGSDQNGDEFKALVLEFICNGSLDEWLHANTTAVRRSYTRINLMKRLHIALDVADALEYLHHHIVPPIVHCDIKPSNILLDDDLVAHVTDFGLARIMNIAEPFKESSSFVIKGTIGYVAPEYGSGSQVSMDGDIYSYGVLLLEMFTGRRPTDNFNYGTTSLVDYVKAAYPNNILEILDASATYNGNTQDIIELVVYPIFRLGLACCKESPRERMKMNDVVKELNAIIKTYSAHTYS
Function		Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsARC_08g0008540	OsARC_08g0008540.01	Chr08	9486160	9489536	+	NAM
CDS seq	ATGGCAATCAAGATGACATGGCAACTTTGGTTGCTCTCTCTTCTCACACATGCCATCCTATTGTTCACAGCCAGCTCTCAGTCCATCAATGGAGATGACCTCTCAGCACTCCTGTCATTCAAATCCCTCATAAGGAACGACCCAAGAGAGGTGCTGTCCTCTTGGGACGCCAGCAGCAACACTACCAACATGACAACACCTGTCTTCTGCCGATGGACCGGCGTTTCCTGCAACGATCGCCGGCATCCAGGTCGTGTTACCACCCTCAATCTGAGCGATGCCGGCCTAGTCGGCACCATATCCCAGCAGCTTGGCAACCTGACCCACCTCCATGTCCTTGATCTGTCAGCCAACAATCTTGATGGTGATATCCCAACCAGCCTTGGCGGCTGTCCAAAGCTTCGTGCCATGAACTTGAGCAGGAACCATCTGTCAGGTACCATCCCTGTTGATCTTGGAAAGTTATCAAAACTTGCGGTTTTCGACGTTGGCCACAACAATCTTACAGGTGATATTCCCAAGTCACTCTCCAACCTCACAACACTTACAAAGTTTATCGTCGAGAGGAACTTCATCTATGGCCAAGATTTGAGCTGGATGGGTAACTTGACAACATTGACACACTTTGTTCTTGAAGGCAACATTTTCACTGGTAACATCCCTGAAACTTTTGGTAAGATGGTTAGGCTTATTTACTTCAGTGTCCAAGATAATCAGTTAGAAGGCCATGTTCCTCTATCAATCTTCAATATTTCTTCCATTAGATTCTTTGATCTTGGCTTCAATAGATTGTCAGGATCACTTCCACTCGATGTTGGCGTTAAGCTTCCAAGGATAAATCGTTTTAACACACTTTTTAACAGTTTTGAGGGTATCCTACCACCCACCTTTTCAAATGCATCTGCACTTGAGCTATTGCTTCTTCATGGAAACAAATACCATGGTTTGATTCCTAGGGAAATTGGCATACATGGCAACCTAAAGGTATTGATGTTAGGAGACAATGCACTCCAAGCCACAAAGTCTAGTGATTGGGAATTTTTTACATCATTGACCAACTGTAGTAGCTTGCGATTTCTAGATATTGGAAAGAACAACCTTGTTGGTGCAATGCCAATTAACATTGCAAACCTGAGCAATGAGCTGTCATGGATTGACCTAGGTGGCAACCAAATAATTGGGACCATACCTGAAGATTTATGGAAGTTTAACAAACTTACTTCTGTCAACCTGTCATATAACCTCTTCACAGGAACATTACCTCCTGATATTGGCGGGCTTCCAAGGCTCAATTCTTTCTACATATCCCATAATAGAATCGATGGGAAAATTCCTCAGTCATTAGGAAATATCACACAATTGAGCTATCTGTCTCTGTCTAATAATTTTCTAGATGGCAGCATTCCAACTAGCCTTGGCAACTTCACAAAACTTGAAGTCATGGATCTTTCTTGTAACAGCTTGACAGGTCAAATTCCACAAGAAATACTTGCAATAACGTCCCTTACCAGACGCCTAAACCTCTCCAACAATGCTCTAATTGGCTCCATTCCAACACAGATTGGGCTCTTGAACAGCCTTGTCAAAATGGATATGTCAATGAATAAGCTGTCTGGTGGAATCCCAGAAGCTATTGGGAGCTGTGTCCAATTGAGTTCCCTAAATTTTCAAGGAAATCTTCTCCAAGGACAAATCCCAAAAAGCCTAAACAATTTGAGGAGCCTTCAAATCCTTGATCTCTCTAAGAACAGCTTGGAAGGTCGCATACCAGAATTTCTAGCGAACTTCACGTTTCTAACTAATCTAAACCTCTCCTTCAACAAACTATCTGGCCCAGTTCCAAATACAGGGATTTTTCGTAATGTCACTATAGTGTTACTCTTAGGAAATAAAATGTTATGTGGTGGCCCTCCATACATGCAATTCCCTTCATGCTCATATGAAGATTCTGACCAGGCTTCAGGGCATCGACTTCATGTCTTAATCTTTTGCATTGTTGGAACTTTAATTTCCTCTATGTGTTGCATGACTGCATACTGCTTCATTAAGAGAAAGATGAAACTGAATGTTGTTGATAATGAGAACCTATTTCTCAATGAGACAAATGAGAGGATATCTTATGCCGAACTACAAGCAGCAACCAATTCATTCTCGCCGGCAAATTTGATCGGTTCGGGAAGCTTTGGCCATGTATACATTGGAAATTTAATTATTGATCAGAATCTAGTGCCAGTTGCAATCAAGGTTCTTAATCTTAGCCAACGAGGAGCCAGTAGAAGCTTTTTGACCGAGTGTGACGCTCTTAGGAGAATTCGACACCGGAAACTTGTCAAGGTGATCACCGTCTGTAGTGGATCAGACCAAAATGGCGACGAATTCAAGGCACTTGTCCTAGAATTTATTTGCAATGGAAGTTTAGATGAGTGGCTTCATGCAAACACGACAGCAGTTAGAAGAAGCTACACAAGGATAAATTTGATGAAAAGGCTGCATATTGCTCTTGATGTTGCAGATGCATTGGAATATCTTCACCATCATATTGTGCCGCCTATAGTTCACTGTGATATTAAACCAAGCAACATTCTTCTAGACGATGACCTGGTGGCGCATGTTACGGACTTTGGTCTAGCGAGGATAATGAATATTGCTGAACCGTTCAAAGAAAGCAGCTCATTTGTAATTAAAGGAACAATTGGATATGTTGCACCAGAATATGGCTCCGGATCTCAGGTCTCCATGGATGGTGACATATATAGCTATGGGGTGCTGTTATTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTAACTATGGTACAACAAGTCTTGTCGACTATGTCAAGGCAGCCTATCCTAACAATATTCTGGAAATACTGGATGCTAGCGCAACCTACAATGGAAACACCCAAGATATCATAGAACTAGTTGTTTATCCTATATTTCGACTTGGTCTAGCATGCTGCAAGGAATCACCAAGGGAAAGGATGAAGATGAATGATGTAGTCAAGGAATTGAATGCTATAATTAAGACATACTCAGCACATACATATTCCTGA More
Protein seq	MAIKMTWQLWLLSLLTHAILLFTASSQSINGDDLSALLSFKSLIRNDPREVLSSWDASSNTTNMTTPVFCRWTGVSCNDRRHPGRVTTLNLSDAGLVGTISQQLGNLTHLHVLDLSANNLDGDIPTSLGGCPKLRAMNLSRNHLSGTIPVDLGKLSKLAVFDVGHNNLTGDIPKSLSNLTTLTKFIVERNFIYGQDLSWMGNLTTLTHFVLEGNIFTGNIPETFGKMVRLIYFSVQDNQLEGHVPLSIFNISSIRFFDLGFNRLSGSLPLDVGVKLPRINRFNTLFNSFEGILPPTFSNASALELLLLHGNKYHGLIPREIGIHGNLKVLMLGDNALQATKSSDWEFFTSLTNCSSLRFLDIGKNNLVGAMPINIANLSNELSWIDLGGNQIIGTIPEDLWKFNKLTSVNLSYNLFTGTLPPDIGGLPRLNSFYISHNRIDGKIPQSLGNITQLSYLSLSNNFLDGSIPTSLGNFTKLEVMDLSCNSLTGQIPQEILAITSLTRRLNLSNNALIGSIPTQIGLLNSLVKMDMSMNKLSGGIPEAIGSCVQLSSLNFQGNLLQGQIPKSLNNLRSLQILDLSKNSLEGRIPEFLANFTFLTNLNLSFNKLSGPVPNTGIFRNVTIVLLLGNKMLCGGPPYMQFPSCSYEDSDQASGHRLHVLIFCIVGTLISSMCCMTAYCFIKRKMKLNVVDNENLFLNETNERISYAELQAATNSFSPANLIGSGSFGHVYIGNLIIDQNLVPVAIKVLNLSQRGASRSFLTECDALRRIRHRKLVKVITVCSGSDQNGDEFKALVLEFICNGSLDEWLHANTTAVRRSYTRINLMKRLHIALDVADALEYLHHHIVPPIVHCDIKPSNILLDDDLVAHVTDFGLARIMNIAEPFKESSSFVIKGTIGYVAPEYGSGSQVSMDGDIYSYGVLLLEMFTGRRPTDNFNYGTTSLVDYVKAAYPNNILEILDASATYNGNTQDIIELVVYPIFRLGLACCKESPRERMKMNDVVKELNAIIKTYSAHTYS More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsARC_08g0008540	OsARC_08g0008540.02	Chr08	9486163	9489564	+	IsoSeq
CDS seq	ATGTTGCACCAGAATATGGCTCCGGATCTCAGGTCTCCATGGATGGTGACATATATAGCTATGGGGTGCTGTTATTGGAAATGTTTACTGGAAGAAGACCAACTGACAATTTTAACTATGGTACAACAAGTCTTGTCGACTATGTCAAGGCAGCCTATCCTAACAATATTCTGGAAATACTGGATGCTAGCGCAACCTACAATGGAAACACCCAAGATA More
Protein seq	MLHQNMAPDLRSPWMVTYIAMGCCYWKCLLEEDQLTILTMVQQVLSTMSRQPILTIFWKYWMLAQPTMETPKI

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	1.243902	0.0	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_08g0247600	RBH	6.164441	5.929903	0.637323
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os08g14950	RBH	0.000000	0.0	0.000000
Nipponbare \| IRGSP 1.0 \| RAP-db	Os08g0247600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_08g0008530	RBH	0.0	0.0	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_08g0008570	SBH	0.616447	0.0	0.077008
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_08g0008670	RBH	0.137900	0.0	0.664060
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_08g0008570	SBH	0.0	0.043443	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_08g0008470	RBH	33.848236	0.0	2.667310
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_08G0142600	RBH	0.6176465	4.5846425	0.0077845
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_08g0008510	RBH	0.0	0.0	0.323003
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_08G0136300	SBH	0.895194	0.1415615	0.4255935
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_08g0008040	RBH	0.486234	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_08g0008240	RBH	0.0	0.952107	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_08g0008080	RBH	2.314076	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_08g0008800	RBH	0.000000	0.0	0.506102
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_08g0008230	RBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_08G008490	RBH	0.100248	0.0	1.117267
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_08g0008300	SBH	0.0	0.0	0.716900

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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