Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0037430 | OGI:02097290 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:34445295-34447303 | ||||||||
| Gene Symbol | WAK21, OsWAK21 | ||||||||||
| DNA seq | ttaactgcaggccggccctcggctcgtgcctatgtactctctctgctgctgccccccctgtaaaatgaaatgaacatccttttatagggatgataagtcggtgcacaggctagctcatacatggattggcatctgcacggccagccagctgcttccatctataagccaaatttccatctagcaaatatcatgattatgataattccattttattgtgatatgatgattcaagcttccattctatggtgatacggagagtagtatttccatgtacttgttgctatatctgtttcttttccattcgaatgaatgcaagaatcatctaggaaatattattatgtgattaccttgccatttcatgatgacactgtggcaacacgcttccattcagatgagatacaattcacaattatttccattaacgggctagctgtaggattgatcgatcatctagagctaatcttccattttataaaagataatcaatgatcccttccatatatttatacaagcttttatatttggaatatggcatttgtgaggggtatgcgtacatgatgtacatcacgtacaccggctgggctggagcataggcaaccagtactatacaagtgtcatataatattcatgcgtgcatacaggtgcatgtgcccatgtagtcaaggttgcaccattagtgataattaatcatcaattttattactaccatcgtttctgggatcaatattttaacacacctcatttcTTttttttattaaaaaaatgtacaaaatatcatcagtggttatactagcaggtacagtagcagactattagctagctataaacataTtttaatgagataaaagatgagagagaagagcagcggGCtatagatctgtagctagttgcatcacggactctaatacacaatgtgtgcatgacaggtgggaccatatattaatagtatagtaatcaactattgtataaattggctattagattgtctatagatgaattagagctactagtgggctatattattaaacttgctctacgagagctgatgcccaagtaagaacatgtacaatagtatgctataagccagctataaatatattttaagaacataaaagaggagagataagagcagcagacaacagatttgtagccagctgcagcacggattccaacacgtatgtctgtatgacaggtgggaccAGAtattgattgtgtagtatatgttcatagctaactattgtatgaattgactattaaattgactatagatgatttgtagccagcagttgaatatactattaaacttgctctaaagtattgcgaagaagaagccagtcactcaacaaagctataattgttttactagaataatgcggaaaagcagagctgaagtgctgaacatgtgttcacttgcacatgctctgaccagtcaattgcattgcccattgccaatttttcttaaagaaaagaaaaaatccctgtaggactcacgagaaaagacggcccagattcattagaccaagttttcttttttaaaaaaaaattgatccaactttcaaagaatggttaattgaatccataccattgcacatgtaccaattaagataaatgccactacaatcgtctataaattatagatgtgccatcaaatatgcataaaattaaaaccatgtcattgcaaacgacattatctacaagctaaatgtatatgtacttccttcttccagatcaagaacatcatgctgcctgaattggtaatttggattctgatgttcaatgccaagcaagctctgattctcctcagcagtacctttagctttagcccaagggtgctgctggtatctcctcagcatctccaacctctctgctacctctttcatcgttggtcgttcttcaccgttcatgcttaggcatcgcatgaggaggtctgcaatctccgttgccatttcgtcgttcatctctttcctcacttggctgtccataagctcttgatgatgaccagccttcat
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| CDS seq | atgaaggctggtcatcatcaagagcttatggacagccaagtgaggaaagagatgaacgacgaaatggcaacggagattgcagacctcctcatgcgatgcctaagcatgaacggtgaagaacgaccaacgatgaaagaggtagcagagaggttggagatgctgaggagataccagcagcacccttgggctaaagctaaagatggaagcagctggctggccgtgcagatgccaatccatggggggcagcagcagagagagtacataggcacgagccgagggccggcctgcagttaa |
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| Protein seq | MKAGHHQELMDSQVRKEMNDEMATEIADLLMRCLSMNGEERPTMKEVAERLEMLRRYQQHPWAKAKDGSSWLAVQMPIHGGQQQREYIGTSRGPACS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0037430 | OsARC_02g0037430.01 | Chr02 | 34445295 | 34447303 | - | NAM | ||
| CDS seq | atgaaggctggtcatcatcaagagcttatggacagccaagtgaggaaagagatgaacgacgaaatggcaacggagattgcagacctcctcatgcgatgcctaagcatgaacggtgaagaacgaccaacgatgaaagaggtagcagagaggttggagatgctgaggagataccagcagcacccttgggctaaagctaaagatggaagcagctggctggccgtgcagatgccaatccatggggggcagcagcagagagagtacataggcacgagccgagggccggcctgcagttaa
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| Protein seq | MKAGHHQELMDSQVRKEMNDEMATEIADLLMRCLSMNGEERPTMKEVAERLEMLRRYQQHPWAKAKDGSSWLAVQMPIHGGQQQREYIGTSRGPACS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.100476 | 0.067494 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0623932 | SBH | 3.445422 | 2.975020 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g56380 | SBH | 0.0 | 0.0 | 0.053127 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0623932 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0037980 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037940 | SBH | 0.000000 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037870 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0037440 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0564900 | SBH | 0.629409 | 4.4362485 | 0.406327 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0037310 | RBH | 0.0 | 0.034888 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0595800 | SBH | 0.0078465 | 0.0283445 | 0.012056 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0025920 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0037640 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0037630 | RBH | 0.0 | 0.0 | 0.054588 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037890 | SBH | 0.081784 | 0.000000 | 0.136404 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0037720 | SBH | 0.0 | 0.0 | 1.107551 |
