Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_02g0623932 | OGI:02070570 | 13/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr02:24871746-24872333 | ||||||||
| Gene Symbol | WAK12, OsWAK12, OsRLCK75, RLCK75, WAK21, OsWAK21 | ||||||||||
| DNA seq | TCACCGTGGAGATTGGATTCCTAAATACGCTGAGTCAGTCAAGCTGACATACCCATTGCTAAGTTCTATTTCAGAGAACGTGCTTGGCGATCCTCTAACAAGCAATTTCTCCAGCTCCTCACTTTCATGCCGTCCCCAAGGATGCTCTGCTAGCTTCCTTAGCCTGTCAAGCTCCTCTGCAACCTGACGCATCGAGGGTCTCTTCTCACTGGACATATCCAGGCACTGCTTCGCTAGATCTGCCATTTGTTCAATCAGTTCAATGCTCTGTTCGCTTTGTATCTGTGAGTCCAGTATCCCCTCGAGCCTGTTCTCACTTAGAGCTAGAAGGAAATGTGACGAGAGATTCTTCTCCTCCTCGAGGGCCTGAAGGTTCAGTGCCTTTCGACACGTGAGCAGCTCTAGTAGAACGACGCCGAAGCTGTACACATCACTCTTATCCGTCAGTTTGCATGTCTGCATGTACTCTGGATCGAGGTAACCGCAGGTCCCCTGAACAAGTGTGACGAACTGAGCTTCATCTGTCGGAGCCAGCGTGGAAGCACCAAAGTCTGAAACCTTCACTGTGTAGTTCTCGTCGATGAGCAT
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| CDS seq | ATGCTCATCGACGAGAACTACACAGTGAAGGTTTCAGACTTTGGTGCTTCCACGCTGGCTCCGACAGATGAAGCTCAGTTCGTCACACTTGTTCAGGGGACCTGCGGTTACCTCGATCCAGAGTACATGCAGACATGCAAACTGACGGATAAGAGTGATGTGTACAGCTTCGGCGTCGTTCTACTAGAGCTGCTCACGTGTCGAAAGGCACTGAACCTTCAGGCCCTCGAGGAGGAGAAGAATCTCTCGTCACATTTCCTTCTAGCTCTAAGTGAGAACAGGCTCGAGGGGATACTGGACTCACAGATACAAAGCGAACAGAGCATTGAACTGATTGAACAAATGGCAGATCTAGCGAAGCAGTGCCTGGATATGTCCAGTGAGAAGAGACCCTCGATGCGTCAGGTTGCAGAGGAGCTTGACAGGCTAAGGAAGCTAGCAGAGCATCCTTGGGGACGGCATGAAAGTGAGGAGCTGGAGAAATTGCTTGTTAGAGGATCGCCAAGCACGTTCTCTGAAATAGAACTTAGCAATGGGTATGTCAGCTTGACTGACTCAGCGTATTTAGGAATCCAATCTCCACGGTGA
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| Protein seq | MLIDENYTVKVSDFGASTLAPTDEAQFVTLVQGTCGYLDPEYMQTCKLTDKSDVYSFGVVLLELLTCRKALNLQALEEEKNLSSHFLLALSENRLEGILDSQIQSEQSIELIEQMADLAKQCLDMSSEKRPSMRQVAEELDRLRKLAEHPWGRHESEELEKLLVRGSPSTFSEIELSNGYVSLTDSAYLGIQSPR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_02g0623932 | OsNip_02t0623932-00 | Chr02 | 24871746 | 24872333 | - | RAP2018-11-26 | ||
| CDS seq | ATGCTCATCGACGAGAACTACACAGTGAAGGTTTCAGACTTTGGTGCTTCCACGCTGGCTCCGACAGATGAAGCTCAGTTCGTCACACTTGTTCAGGGGACCTGCGGTTACCTCGATCCAGAGTACATGCAGACATGCAAACTGACGGATAAGAGTGATGTGTACAGCTTCGGCGTCGTTCTACTAGAGCTGCTCACGTGTCGAAAGGCACTGAACCTTCAGGCCCTCGAGGAGGAGAAGAATCTCTCGTCACATTTCCTTCTAGCTCTAAGTGAGAACAGGCTCGAGGGGATACTGGACTCACAGATACAAAGCGAACAGAGCATTGAACTGATTGAACAAATGGCAGATCTAGCGAAGCAGTGCCTGGATATGTCCAGTGAGAAGAGACCCTCGATGCGTCAGGTTGCAGAGGAGCTTGACAGGCTAAGGAAGCTAGCAGAGCATCCTTGGGGACGGCATGAAAGTGAGGAGCTGGAGAAATTGCTTGTTAGAGGATCGCCAAGCACGTTCTCTGAAATAGAACTTAGCAATGGGTATGTCAGCTTGACTGACTCAGCGTATTTAGGAATCCAATCTCCACGGTGA
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| Protein seq | MLIDENYTVKVSDFGASTLAPTDEAQFVTLVQGTCGYLDPEYMQTCKLTDKSDVYSFGVVLLELLTCRKALNLQALEEEKNLSSHFLLALSENRLEGILDSQIQSEQSIELIEQMADLAKQCLDMSSEKRPSMRQVAEELDRLRKLAEHPWGRHESEELEKLLVRGSPSTFSEIELSNGYVSLTDSAYLGIQSPR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.445422 | 2.975020 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0517700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g41500 | SBH | 1.657611 | 1.721222 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0623932 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0025630 | RBH | 0.040646 | 0.0 | 0.403740 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0025780 | SBH | 0.055709 | 0.0 | 0.207529 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0025600 | SBH | 0.182631 | 0.0 | 0.143559 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025220 | SBH | 0.031041 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025320 | SBH | 4.100601 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0404400 | RBH | 0.3850005 | 0.403257 | 0.0058235 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025210 | SBH | 0.157990 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0433300 | SBH | 0.189664 | 0.4274165 | 0.0110375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0025410 | SBH | 0.073091 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025230 | SBH | 0.121763 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0025560 | SBH | 2.093980 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025430 | SBH | 0.178774 | 0.0 | 0.144765 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0024960 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G025600 | SBH | 0.067681 | 0.191978 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025460 | SBH | 0.102705 | 0.0 | 0.0 |
