Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_04g0517700 | OGI:04078030 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr04:25884745-25885575 | ||||||||
| Gene Symbol | RLCK153, OsRLCK153, WAK51, OsWAK51 | ||||||||||
| DNA seq | CATACACATGTAATAACCACTAAGCAGGTTCAGAAAGAGAGGAAATGGAATATTTGAACATGTTCTACAAATTGGCCTAAGCGCCTAGCGCCCTAGCATGGTACACAAATTATTAATGGAATGCTATTTTACATGCTTTAGCCTTTTAATCACCTCGCATAATACGTACTTCCTGGGTTCATCGGTAGGTTCTCACGTTCCTCCCCAAGATAGCCGGTACTACTTGTTTCAATCTCAAGACCACTATTAATTGTAGATGGTCCGCCAAGAAGGTTCTCTGTTTCCATCTCTGCATCGACTTGTACCCAAGGATGCAGTGAAAGCTTCCTCAATCGGCCCAGCTCGTCGGTGATTTCTTTCATCGATGGCCTGTTGGCGCCGCACATATCAAGGCATTGCTTGGCTAGCTCAGCAAGTCCCCCGATTAGTTCCATGCTCTCTTGGCCTTTTATGTCGCTCACCAACACCGAGTCAAGATTGTTCCCCTTCATGGCAGATAGGAAAACTGATGACAAGCTTCTTTGTATCGCAGGTCCTTCGAGCTTCAGTGGCACTTGGCCTGTGAGAATCTCTAGAAGGATAACACCGAAGCTATACACATCGCTCTTGTCGGTCAATTGGCACGTTTGCATGTATTCGGGATCGAGATAGCCACATGTACCTTGAACCATTGTGACAAACTGCTCTTTGTCGGATGGAGCTAGTATAGATGCTCCGAAGTCTGTCACTTTGGCCATGTAGTTCTCATCAAGAAGTATGTTGGCAGTTTTCACATCACCATGGAGAATTGGTGGAGATGCATAGGAATGTAGGAAGTGAAGCCCTTCAGCT
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| CDS seq | GCTGAAGGGCTTCACTTCCTACATTCCTATGCATCTCCACCAATTCTCCATGGTGATGTGAAAACTGCCAACATACTTCTTGATGAGAACTACATGGCCAAAGTGACAGACTTCGGAGCATCTATACTAGCTCCATCCGACAAAGAGCAGTTTGTCACAATGGTTCAAGGTACATGTGGCTATCTCGATCCCGAATACATGCAAACGTGCCAATTGACCGACAAGAGCGATGTGTATAGCTTCGGTGTTATCCTTCTAGAGATTCTCACAGGCCAAGTGCCACTGAAGCTCGAAGGACCTGCGATACAAAGAAGCTTGTCATCAGTTTTCCTATCTGCCATGAAGGGGAACAATCTTGACTCGGTGTTGGTGAGCGACATAAAAGGCCAAGAGAGCATGGAACTAATCGGGGGACTTGCTGAGCTAGCCAAGCAATGCCTTGATATGTGCGGCGCCAACAGGCCATCGATGAAAGAAATCACCGACGAGCTGGGCCGATTGAGGAAGCTTTCACTGCATCCTTGGGTACAAGTCGATGCAGAGATGGAAACAGAGAACCTTCTTGGCGGACCATCTACAATTAATAGTGGTCTTGAGATTGAAACAAGTAGTACCGGCTATCTTGGGGAGGAACGTGAGAACCTACCGATGAACCCAGGAAGTACGTATTATGCGAGGTGA
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| Protein seq | AEGLHFLHSYASPPILHGDVKTANILLDENYMAKVTDFGASILAPSDKEQFVTMVQGTCGYLDPEYMQTCQLTDKSDVYSFGVILLEILTGQVPLKLEGPAIQRSLSSVFLSAMKGNNLDSVLVSDIKGQESMELIGGLAELAKQCLDMCGANRPSMKEITDELGRLRKLSLHPWVQVDAEMETENLLGGPSTINSGLEIETSSTGYLGEERENLPMNPGSTYYAR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_04g0517700 | OsNip_04t0517700-01 | Chr04 | 25884745 | 25885575 | - | RAP2018-11-26 | ||
| CDS seq | GCTGAAGGGCTTCACTTCCTACATTCCTATGCATCTCCACCAATTCTCCATGGTGATGTGAAAACTGCCAACATACTTCTTGATGAGAACTACATGGCCAAAGTGACAGACTTCGGAGCATCTATACTAGCTCCATCCGACAAAGAGCAGTTTGTCACAATGGTTCAAGGTACATGTGGCTATCTCGATCCCGAATACATGCAAACGTGCCAATTGACCGACAAGAGCGATGTGTATAGCTTCGGTGTTATCCTTCTAGAGATTCTCACAGGCCAAGTGCCACTGAAGCTCGAAGGACCTGCGATACAAAGAAGCTTGTCATCAGTTTTCCTATCTGCCATGAAGGGGAACAATCTTGACTCGGTGTTGGTGAGCGACATAAAAGGCCAAGAGAGCATGGAACTAATCGGGGGACTTGCTGAGCTAGCCAAGCAATGCCTTGATATGTGCGGCGCCAACAGGCCATCGATGAAAGAAATCACCGACGAGCTGGGCCGATTGAGGAAGCTTTCACTGCATCCTTGGGTACAAGTCGATGCAGAGATGGAAACAGAGAACCTTCTTGGCGGACCATCTACAATTAATAGTGGTCTTGAGATTGAAACAAGTAGTACCGGCTATCTTGGGGAGGAACGTGAGAACCTACCGATGAACCCAGGAAGTACGTATTATGCGAGGTGA
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| Protein seq | AEGLHFLHSYASPPILHGDVKTANILLDENYMAKVTDFGASILAPSDKEQFVTMVQGTCGYLDPEYMQTCQLTDKSDVYSFGVILLEILTGQVPLKLEGPAIQRSLSSVFLSAMKGNNLDSVLVSDIKGQESMELIGGLAELAKQCLDMCGANRPSMKEITDELGRLRKLSLHPWVQVDAEMETENLLGGPSTINSGLEIETSSTGYLGEERENLPMNPGSTYYAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0623932 | RBH | 3.445422 | 2.975020 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g43730 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0517700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0020010 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0020800 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0020510 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0020230 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0020440 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0404900 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0019230 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0405900 | RBH | 0 | 0.149163 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0019720 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0019570 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0019690 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0020060 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0020230 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G019500 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0019470 | RBH | 0.000000 | 0.0 | 0.0 |
