Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0012100 | OGI:02028560 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:10168973-10169395 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctaaggtgttgggatggatccagaaaacctattgctggacaaatccaaatcaaagaggtcgacaagacgacctatgcttgatgggataggcccagagatagagttgtttccgaggtcgagtccttgaagatgggggaattctgcaaaccagaacccgtccaaattgccggagatgccacacgagttaagcgaaatactgagaatacctggggcatcatcacttgtgctgcagacgatgccggtccagttgcatgtgttggtgcccttggtccatgagtttaggcagctaccatggccatctaatccagatttccattggagaagagcatctgcttgccggtccagcacacttgctgtagagtttgcaggacagagaaggcatgccgaggaaagcagcagcagctctagagcaaggagtttcat
More
|
||||||||||
| CDS seq | atgaaactccttgctctagagctgctgctgctttcctcggcatgccttctctgtcctgcaaactctacagcaagtgtgctggaccggcaagcagatgctcttctccaatggaaatctggattagatggccatggtagctgcctaaactcatggaccaagggcaccaacacatgcaactggaccggcatcgtctgcagcacaagtgatgatgccccaggtattctcagtatttcgcttaactcgtgtggcatctccggcaatttggacgggttctggtttgcagaattcccccatcttcaaggactcgacctcggaaacaactctatctctgggcctatcccatcaagcataggtcgtcttgtcgacctctttgatttggatttgtccagcaataggttttctggatccatcccaacaccttag
More
|
||||||||||
| Protein seq | MKLLALELLLLSSACLLCPANSTASVLDRQADALLQWKSGLDGHGSCLNSWTKGTNTCNWTGIVCSTSDDAPGILSISLNSCGISGNLDGFWFAEFPHLQGLDLGNNSISGPIPSSIGRLVDLFDLDLSSNRFSGSIPTP |
||||||||||
| Function | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 [UniProtKB/Swiss-Prot:Q9M2Z1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0012100 | OsARC_02g0012100.01 | Chr02 | 10168973 | 10169395 | - | NAM | ||
| CDS seq | atgaaactccttgctctagagctgctgctgctttcctcggcatgccttctctgtcctgcaaactctacagcaagtgtgctggaccggcaagcagatgctcttctccaatggaaatctggattagatggccatggtagctgcctaaactcatggaccaagggcaccaacacatgcaactggaccggcatcgtctgcagcacaagtgatgatgccccaggtattctcagtatttcgcttaactcgtgtggcatctccggcaatttggacgggttctggtttgcagaattcccccatcttcaaggactcgacctcggaaacaactctatctctgggcctatcccatcaagcataggtcgtcttgtcgacctctttgatttggatttgtccagcaataggttttctggatccatcccaacaccttag
More
|
|||||||
| Protein seq | MKLLALELLLLSSACLLCPANSTASVLDRQADALLQWKSGLDGHGSCLNSWTKGTNTCNWTGIVCSTSDDAPGILSISLNSCGISGNLDGFWFAEFPHLQGLDLGNNSISGPIPSSIGRLVDLFDLDLSSNRFSGSIPTP |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.168590 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0277700 | SBH | 0.0 | 0.347361 | 0.606831 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g17730 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0277700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0012260 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0012420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012270 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012020 | SBH | 0.453561 | 0.0 | 3.162713 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0052600 | SBH | 0.2532285 | 0 | 0.0206475 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0011850 | SBH | 0.000000 | 0.0 | 0.104738 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0178200 | SBH | 9.981467 | 32.370039 | 17.6869155 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0012410 | SBH | 0.053935 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0012010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012430 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012270 | SBH | 0.191755 | 0.000000 | 0.372187 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0004290 | SBH | 0.032945 | 0.534010 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G012430 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0012220 | SBH | 0.0 | 1.688463 | 1.091499 |
