Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_01g0046120 OGI:01121920 | 10/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr01:41929039-41932853
Gene Symbol OsEGL2
DNA seq

GTATAAATTAGGAATAGTACAAATCGCAGGCACACGATGAAAAATACACAATACTGACACAATAACAAACGTATACACCCCTCTATCTCCAGGCTCGTGCTATACATGTTGACCTCTCCTCGCGTTCACAACCAATTACTGTACAGATACGCATACAGAAGTAGTCAGCACGTAGCACGGCCGCATACATATGTTTCGACCAACCGATGGTATGTTCAGACCCGACGGGAATTCTCTGCATTACCGCTGATATAGGATGAGCCACTATTATATAGGATCAAACTACTGGCTGCCGCTCGTAATTGCTACTGTACCAACAGCACTGCAGAGGATCCGTGTCCGTGTCAAATACGGGCATGGAAGCTAATGGGGTAGACCCTATCGGTGCTGGGGTAGAAGAGGCCCCAATTCTGCTCCACGCCGGCCTCCTTGAGGTTCTCGTTGAACATGGCGAACACGTACGTCTCCGTCTTCTTCCCGGGATGCCGCGGCGTGCCATTCCGGACGTGCCTCACCAGGTTCTGGTTGAATGTCATGGCGTTCTCCACCGACGCGCCCACGCCGCCCGCCGTCGGCCACCCGGTCTCAGACACCACCACCCTCACGTTCTCTCCCCCGAGCTTCGCCACCGCCGTGTACAGCGCGTCCACCGTCGCGTCGAACTGGTTCTGGTACCCGTACTCCCCGTCCTGCACCACCGCGCCGCTCGCCGTGAACAGCGCGAAGCTGATGTCCATGCCCCCCGGGTTGTATGAGTAGATGAAGTATGGGTACAGGTTGGCCAGCAGCGGCGCGTGCGTCCGTTCCAGGAATGGGATCACGTAGCTCATGAACGGCTTCGCCTCGTCGGTGAACTCGCCGGCGGACGGCGGGATGTGGACGCCGATGGTGGCCTGGGAGATCGACGTCGTCACCTTGATGTGTCCCAGCCCGGCCGCCGCGAGCGCGGCGTGGACGTTCTCCATGGCCGGGACGAGGAGCTGCGTGTCGGCGCCGGCGACCTCGTTGCCCACGACGACGAACCGGAACAGGACCGTCGGGTAGGCCTGGATGTTCTCGCGGATCCAGGCGGCCGCGGCGGCGGTCCCGCCGTGCGCCAGGGCGGGGAGGTCGTAGTTGGGCGCGCCGACGACGACGCGGATGCCCGTGCCGCCGAGCGCCGCGAGCGCGGCGCTGTCCGGCGCGTAGAGGCGCACGACGGTGAAGCCGTTCTCGCGGAGCATCTCGGTGACCTTGCTCGCCGGCGGCAGGTTGTCGCCGCTCATGCCCCAGCATACTCCAACCGCTGCCGTTCCTGTCTCAGATTCCATTTCAACCTTTGTCAAATTAAAGCTTAAGCTTCTGATTTGATTTTTTTTGCAGTATACGTAGGTTAATCGCTACCGCATTTTATAGTAACCCGAACTTTAATTTGTAGGCACGCAAGCAAGAAATTAACGTAACGTAGGTACGTATGTAGCTTGCAAAGACGCAATGACAAACAAAATCGAGAAGGCAATCATATATACACCGTACATTAGCATGCGTGGAAGGATCCCTCTTGAACTTTATTGCTGGAATTGCCGTTGTGTTGCCAACAATTAAAATGGCACTCCCTCCAGTCGTCAGGGATGATCAAACTTTTAAAAATTATAGCAGTCAATTTATATTAGAGTAAGTTTATTAAAACCTAACAAATCTATATATTTGATAATGTTTTTCAAGTCAAATCAATTTGTACTGTTTTTTTAACTAAGTATTTGAGAAATTGTTGACGGTTGAAATTTTAATATTTGAGTTCATGTTTCGTAGAAGATGAGATGAGATGGTTGAGGAGCACAGACAGTGAGATCAGACCGGAAGGACCGGCAAGGAGTCAATCCAAACCTCGTTCGACAAATTGACTTCAGCGACATCTCGGAAGAATAATTTAGACTCATGGAAACTGACGTTTAACTGAAAACGAAGATGTAGTAGTACAACTGCACTAGCACAGATTCCTAATTTCCGTCGTTTTTTTTCCCAATCGTAAGTGCTCTCTGATGGTACTCGCAACTAACTTATGTTCGTTAAAAACATGCACCTAATCGAGTTAGTTGACGGCAATTCTGCCAAAGTGCTTTACATACATTCAGAGTTTCAGACTCAGATACTTAGTCCGTCGAGCACCAGTTAAATAAACAAATCAGGTGGTGGAGCGTGCAATTTGCCGAAATTTGTTAGCTACCAAAGCAGAGCATGCAGTTCTTGACTAATTAAAGTTTCATGCATACTAGTAGCATTATTATTTGTCCATATCTTACATGTACAGACGAACTAACTAACCTCTGTTCTTTAGAAAGGAAAAGAAAAAAAAACAATAACCAAACAATCTGGTTCACAAAATCACAACCTAGCAAATTTGCCCATGCAAACAAAGTAGCTGTCAGGTAGAAAGCGAAGGACCACGTACGGGAAATGGAATTGAAAACGTCTGTTCCAACGTCTGCAGCACGACTGTTGGACAGTCCAATTCGTTCGCATGCATGCAGGCATGCAACCGTGTCCATTTCGATAGCTAACAGGATTACAGGACTGCACCAGCCTGCCCGTGATCACGGCCGGCCTCGCCGGTCGCGCTTGTTTGTTAATCAAGTGCAGAAAAGCCAAACGATGCAAAGAAACTTCCTTTTCGGCTTATGGACTAATGGATTGTCACCGGCAGTCATGGTACACTTTCTAAGCCTCTAAACGATGTACTCCAAAAATTTTCTTCACCAGCCTTTGTTAGAAATAATTTTTAAATCAACTTTTAAATTTTCTAATATTTAATTACTCTCAAATAACTGTTACGAACTCAGTTTGTGCTATCATCCATCAAAGGGATCGGGCTGAGTTCTTTCTCCAATTTTCCTAACTCATCTCCCTTATTTTTCACGCGCACGTTTTTTAAATTGCTAAACGGTACGTTTTTTATAAAAATTTTCTATATGAAAGTTGCTTTAAAAAAATCATATTAATCGATTTTTCAAAAAAATGCTAATATTTAATTAATTATGTACTAAACTGCTCCATTTTACGTACGTGGAACGAACACAGCCTAGTCCATAGATTTTGGGCAAATGAGTTACTGACAAGCTGGTACGTGCGTACTTTCACCTCTCCTGAAGGAATCGTAATCTAGCGTGCAGTAGTGCTGGTAAACTATCACACATCATGCATCTTAATGACGCCCCTAAAACCAATTAATTTTCTAACAGAATCTTGCTTTGTGGTACCATACTAGTTTCTTAATACAGTAGTATGCGTAATCGTGCACGAATTTCACAGGAACGGTGAGAATTTTCCCGTGTTTCATCAAACCAAACGTTTGCATTGTATATTTCCATGCATAGCGTTCATGCTGAAGAAAGAGATGCGTCCTTGAATCTACGCTCGATTGCTTACATGTTTTGTTTTCTTACCGTGTTACCGTTTCACTAAATGAGTATCTCGCGTAACGCTTGTCATGTAGTACTAATGTGCAAGATAGTAACTCCACTACTTGAAATCAACAAACTCACTCGTACGTTCGGCAATGGCTTGCACACCAATTTCAACTTTTTCACGGCACAACTCTTCACATAGGACAATAAACTTTTCGCATTGCAAGCTAATACAAAAAACACAAGAACTAAACAGAAGCAGAGTATGCTAGAAGAAAAGCAGGGGAACAAAATCAGTGAGAGAGTTCTGTACCTGCTAGGATGGAGGCAAAAACTGCAAGTAGCAACGCCATGTCGAGCATGGAAGCAGCTGAAGACGCCATTCTCAAGCTCGACTCAACCTGTGACATCTGACCTGTTGTTGCTTCTTGC

More
CDS seq

ATGTCACAGGTTGAGTCGAGCTTGAGAATGGCGTCTTCAGCTGCTTCCATGCTCGACATGGCGTTGCTACTTGCAGTTTTTGCCTCCATCCTAGCAGGAACGGCAGCGGTTGGAGTATGCTGGGGCATGAGCGGCGACAACCTGCCGCCGGCGAGCAAGGTCACCGAGATGCTCCGCGAGAACGGCTTCACCGTCGTGCGCCTCTACGCGCCGGACAGCGCCGCGCTCGCGGCGCTCGGCGGCACGGGCATCCGCGTCGTCGTCGGCGCGCCCAACTACGACCTCCCCGCCCTGGCGCACGGCGGGACCGCCGCCGCGGCCGCCTGGATCCGCGAGAACATCCAGGCCTACCCGACGGTCCTGTTCCGGTTCGTCGTCGTGGGCAACGAGGTCGCCGGCGCCGACACGCAGCTCCTCGTCCCGGCCATGGAGAACGTCCACGCCGCGCTCGCGGCGGCCGGGCTGGGACACATCAAGGTGACGACGTCGATCTCCCAGGCCACCATCGGCGTCCACATCCCGCCGTCCGCCGGCGAGTTCACCGACGAGGCGAAGCCGTTCATGAGCTACGTGATCCCATTCCTGGAACGGACGCACGCGCCGCTGCTGGCCAACCTGTACCCATACTTCATCTACTCATACAACCCGGGGGGCATGGACATCAGCTTCGCGCTGTTCACGGCGAGCGGCGCGGTGGTGCAGGACGGGGAGTACGGGTACCAGAACCAGTTCGACGCGACGGTGGACGCGCTGTACACGGCGGTGGCGAAGCTCGGGGGAGAGAACGTGAGGGTGGTGGTGTCTGAGACCGGGTGGCCGACGGCGGGCGGCGTGGGCGCGTCGGTGGAGAACGCCATGACATTCAACCAGAACCTGGTGAGGCACGTCCGGAATGGCACGCCGCGGCATCCCGGGAAGAAGACGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCTCAAGGAGGCCGGCGTGGAGCAGAATTGGGGCCTCTTCTACCCCAGCACCGATAGGGTCTACCCCATTAGCTTCCATGCCCGTATT

More
Protein seq

MSQVESSLRMASSAASMLDMALLLAVFASILAGTAAVGVCWGMSGDNLPPASKVTEMLRENGFTVVRLYAPDSAALAALGGTGIRVVVGAPNYDLPALAHGGTAAAAAWIRENIQAYPTVLFRFVVVGNEVAGADTQLLVPAMENVHAALAAAGLGHIKVTTSISQATIGVHIPPSAGEFTDEAKPFMSYVIPFLERTHAPLLANLYPYFIYSYNPGGMDISFALFTASGAVVQDGEYGYQNQFDATVDALYTAVAKLGGENVRVVVSETGWPTAGGVGASVENAMTFNQNLVRHVRNGTPRHPGKKTETYVFAMFNENLKEAGVEQNWGLFYPSTDRVYPISFHARI

Function Lichenase-2 (Fragment) [UniProtKB/Swiss-Prot:P12257]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_01g0046120 OsARC_01g0046120.01 Chr01 41929039 41932853 - NAM
CDS seq

ATGTCACAGGTTGAGTCGAGCTTGAGAATGGCGTCTTCAGCTGCTTCCATGCTCGACATGGCGTTGCTACTTGCAGTTTTTGCCTCCATCCTAGCAGGAACGGCAGCGGTTGGAGTATGCTGGGGCATGAGCGGCGACAACCTGCCGCCGGCGAGCAAGGTCACCGAGATGCTCCGCGAGAACGGCTTCACCGTCGTGCGCCTCTACGCGCCGGACAGCGCCGCGCTCGCGGCGCTCGGCGGCACGGGCATCCGCGTCGTCGTCGGCGCGCCCAACTACGACCTCCCCGCCCTGGCGCACGGCGGGACCGCCGCCGCGGCCGCCTGGATCCGCGAGAACATCCAGGCCTACCCGACGGTCCTGTTCCGGTTCGTCGTCGTGGGCAACGAGGTCGCCGGCGCCGACACGCAGCTCCTCGTCCCGGCCATGGAGAACGTCCACGCCGCGCTCGCGGCGGCCGGGCTGGGACACATCAAGGTGACGACGTCGATCTCCCAGGCCACCATCGGCGTCCACATCCCGCCGTCCGCCGGCGAGTTCACCGACGAGGCGAAGCCGTTCATGAGCTACGTGATCCCATTCCTGGAACGGACGCACGCGCCGCTGCTGGCCAACCTGTACCCATACTTCATCTACTCATACAACCCGGGGGGCATGGACATCAGCTTCGCGCTGTTCACGGCGAGCGGCGCGGTGGTGCAGGACGGGGAGTACGGGTACCAGAACCAGTTCGACGCGACGGTGGACGCGCTGTACACGGCGGTGGCGAAGCTCGGGGGAGAGAACGTGAGGGTGGTGGTGTCTGAGACCGGGTGGCCGACGGCGGGCGGCGTGGGCGCGTCGGTGGAGAACGCCATGACATTCAACCAGAACCTGGTGAGGCACGTCCGGAATGGCACGCCGCGGCATCCCGGGAAGAAGACGGAGACGTACGTGTTCGCCATGTTCAACGAGAACCTCAAGGAGGCCGGCGTGGAGCAGAATTGGGGCCTCTTCTACCCCAGCACCGATAGGGTCTACCCCATTAGCTTCCATGCCCGTATT

More
Protein seq

MSQVESSLRMASSAASMLDMALLLAVFASILAGTAAVGVCWGMSGDNLPPASKVTEMLRENGFTVVRLYAPDSAALAALGGTGIRVVVGAPNYDLPALAHGGTAAAAAWIRENIQAYPTVLFRFVVVGNEVAGADTQLLVPAMENVHAALAAAGLGHIKVTTSISQATIGVHIPPSAGEFTDEAKPFMSYVIPFLERTHAPLLANLYPYFIYSYNPGGMDISFALFTASGAVVQDGEYGYQNQFDATVDALYTAVAKLGGENVRVVVSETGWPTAGGVGASVENAMTFNQNLVRHVRNGTPRHPGKKTETYVFAMFNENLKEAGVEQNWGLFYPSTDRVYPISFHARI

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0944500 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g71474 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0942300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0046720 RBH 0.0 0.0 3.712151
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0046230 RBH 0.0 0.0 0.901774
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0046650 RBH 0.0 1.560158 4.059503
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0014760 RBH 0.328859 1.455300 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0045600 SBH 2.841192 3.242343 37.862839
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0681200 SBH 3.643111 1.8056825 0.6814965
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0045140 SBH 0.074657 0.0 2.118684
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0683400 RBH 8.030187 4.879612 0.0504565
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0045720 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0045530 SBH 0.241999 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0045860 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0045860 SBH 0.0 0.224157 4.562868
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0045600 SBH 0.110860 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G045980 RBH 0.0 0.0 0.629059
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0045740 RBH 0.0 0.000000 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.