Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os11g0490200		OGI:11051090 \| 16/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr11:17290977-17294288		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		-
DNA seq		ATGAATACAGCATGCTGCATTCACTTCAAACTAACATTTTCTCCATGCTTCCCAGTGTCAACTATGTTTGCCTCTCTTCTGTTGATTCTGCTGCATGTGCTCCAATCAGTGTCGACATCGACAATGGAATATCATAACACAACTGATGAGAACATCTTGCTAGCATTCAAGGCAGGCCTAAGCAACCAGAGTGATGTCCTATCTTCATGGAAAAAAAGCACAGATTTCTGTCAGTGGCCAGGTGTGCTTTGCAGCCTTAAGCATAAACACAGGGTCACAGTGCTTAACCTCTCCTCAGAGAGCCTTGCTGGCACAATCTCCCCTTCCATTGGGAACCTCACATTCTTGAAAATTTTAGACCTCAGTGGGAACAATTTGGATGGTGAAATACCTTCATCAATTGGCCGTCTAGCTCGATTACAATTTCTTGATTTGTCCAACAACTCACTCCATGGCGACATAACCTCTGACTTGAAAAACTGCACCAGTCTTCAGGGCATCAGTCTTAAATCAAACTACCTCACCGGAGAAATCCCTGCTTGGCTTGGAGCCCTACCAAGTCTCAAGCTCATATACCTGCAGAAGAACAGCTTCACTGGATCCATCCCGACCTCCCTTGCGAACCTCTCGTCGCTGCAAGAAATCTATCTCACCATGAATCAACTTGAGGGCACCATCCCTGAGGGTTTTGGTAGGCTCAGTGGTCTCAAGAACATTCATCTGGGTGTAAACCACCTCTCAGGCATGATCCCAACAAGCATCTTTAATATTTCCTCGCTAAGTTGCTTCGGTGTACCCATGAACCAGTTGCATGGTTTGCTCCCCTCTGACTTGGGGATTCACCTACCAAAGCTCCAGTACCTCCTCCTAGGCTATAACCACTTTACAGGAAGCCTTCCAGCCTCTATCGCCAATTCAACTGAGATATATTCCCTCGACATATCGTTCAACAACTTCAGTGGAAGCATACCTCCAGAGATTGGAACACTTTGCCCAGACTTCCTCTCATTTGATACAAATCAGCTCATAGCAACTACTGCTGAAGACTGGAAATTCATGACATTCTTGACAAACTGCACACGCCTGCGTATTCTTGACCTCCAGGACAACATGCTAGGTGGCGTGCTGCCAACCTCTGTTTCCAACCTTTCAGCACAACTCCAACTACTATATGTTGGATTCAACAAGATCTCAGGAAATATACCATTTGGCATCAGCAACCTGGTTGGGCTAAATCAATTGCAACTCGCTAATAACCAATTTACTGGTACCTTGCCTGATAACATTGGAAGGCTAAGTTTTCTACATCTCTTGGGCATCGAAAATAACCTATTGACAGGGTTCATTCCATCATCAGTGGGGAATTTAACACAGCTCTTACGTCTTTCCATGGATAACAACATGCTTGAGGGACCTCTCCCAACAAGCATAGGGAACCTGCAGAAGATAACTCTAGCCTTATTTGCACGCAATAAATTTACAGGACCATTGCCCAGAGAGATCTTTAACTTATCTTCCCTGTCATATGCTCTGGTTTTGTCAGGGAACTATTTTGTTGGTCCTCTTCCTCCTGAAGTTGGCAGCTTGACAAATCTTGCATACTTGTACATATCCAGCAACAACTTATCAGGGCCACTACCTAACGAACTTAGTAATTGCCAAAGCTTGATAGACCTCCGGTTGGACCAAAACTTATTCAGTGGTAACATCCCAGAAACTCTCAGCAAACTGCGGGGCTTGACATCGCTGACTTTAACCAAAAACACACTCTCAGGAGTGATTCCTCAAGAGTTGGGCCTCATGGATGGCATGAAAGAATTGTATCTTGCACACAACAACTTATCTGGTCATATCCCAGTAAGCATTGGAAACATGACATCATTGAACCGTCTAGATCTCTCTTTCAACCATCTTGATGGTGAAGTTCCATCAAAGGGAGTGCTCAGTAACATGACAGGGTTCGTATTTAATGGGAATTTGGGGCTCTGCGGTGGTATCCCAGAATTAGGCTTGCCCCCATGTCCGCCAGTGTCCATGGGACACAGCCTAAGGAAAAGTCATCTTGTCTTCAGAGTAGTTATCCCAATTGTTGGCACCATTCTGTTCTTAAGTTTGATGCTTGCTATCTTTGTCTTAAGAAAGAAACCAAAAGCTCAATCTAAAAAGACAATAGGATTTCAATTGATAGATGATAAGTATCCTAGAGTTTCTTATGCTGAGTTGGTCCAAGGAACAAATGGCTTTGCCACAGACAGCTTGATGGGAAGAGGAAGATACGGATCAGTGTATAAGTGTGGTTTGCTGCTAAAAAGTATGATGACCACGGTTGCTGTGAAAGTGTTTGATCTTCAACAATCTGGTTCTTCCAAAAGTTTTCTAGCTGAGTGTGAGGCACTAAGTAAGATCCGCCATCGTAATTTGATTAATGTCATAACTTGCTGTTCAAGCACTGATATAAAGCAGAATGACTTCAAGGCCATTGTTTTTGAGTTCATGCCTAATGGGAGCCTGGATAGGTGGTTACATCTAGATGTGACGGCATCACAACCACCACAAGGTTTGACACTGATCCAGAGATTGAACATTGCCGTTGATGTTGCTGATGCACTAGATTATTTGCACAACAACTGCGATCCACCCATAGTTCACTGTGACTTGAAGCCAAGTAACATTCTTCTTGATGAAGATTTAGTTGCTCATGTTGGTGACTTCGGCCTTGCAAAGATTCTTGCTGATTCAGAAGGTGAACAACCGATTAATTCAAAGAGCTCTATTGGAATACGAGGAACGATTGGATATGTCGCTCCAGGTAATTCATTTTCTCTAATATTTTAATCTTGTCAACGAAAATGCATGCATAATCACTATTTTTGTCTATGCAACATAGAGTATGGGGAAGGCGGGCAAGTTTCTCCCTGTGGAGACGCGTACAGCTTTGGAATTGTCATCCTCGAGCTGTTTACAGGCATGGTACCTACTCATGACATGTTCAGAGATGGGTTAACCTTGCAGAAGCATGTCAAGAACGTATTTCCAGGAATTCTTATGAAGATTGTCGATCCAATACTACTGTCTATTGAAGGAGTTTATACAAGTAATTTGCCCCCTGGAAGAAATGCAATGGAACATATGAACCATGCCATATTGTCTATCATGAAAATAGCTCTCTCATGCAGCAGACAGGCACCAACAGAGAGGATGAGGATCAGAGATGCAGCAGCAGATTTGCGCAGGGTAAGGGATAGCCATGTAAGAGGAAATGAGGAGCATCTAGAACTGTGCAGTGATGTCACTAATCTAGCCAGTGCTTGA More
CDS seq		ATGAATACAGCATGCTGCATTCACTTCAAACTAACATTTTCTCCATGCTTCCCAGTGTCAACTATGTTTGCCTCTCTTCTGTTGATTCTGCTGCATGTGCTCCAATCAGTGTCGACATCGACAATGGAATATCATAACACAACTGATGAGAACATCTTGCTAGCATTCAAGGCAGGCCTAAGCAACCAGAGTGATGTCCTATCTTCATGGAAAAAAAGCACAGATTTCTGTCAGTGGCCAGGTGTGCTTTGCAGCCTTAAGCATAAACACAGGGTCACAGTGCTTAACCTCTCCTCAGAGAGCCTTGCTGGCACAATCTCCCCTTCCATTGGGAACCTCACATTCTTGAAAATTTTAGACCTCAGTGGGAACAATTTGGATGGTGAAATACCTTCATCAATTGGCCGTCTAGCTCGATTACAATTTCTTGATTTGTCCAACAACTCACTCCATGGCGACATAACCTCTGACTTGAAAAACTGCACCAGTCTTCAGGGCATCAGTCTTAAATCAAACTACCTCACCGGAGAAATCCCTGCTTGGCTTGGAGCCCTACCAAGTCTCAAGCTCATATACCTGCAGAAGAACAGCTTCACTGGATCCATCCCGACCTCCCTTGCGAACCTCTCGTCGCTGCAAGAAATCTATCTCACCATGAATCAACTTGAGGGCACCATCCCTGAGGGTTTTGGTAGGCTCAGTGGTCTCAAGAACATTCATCTGGGTGTAAACCACCTCTCAGGCATGATCCCAACAAGCATCTTTAATATTTCCTCGCTAAGTTGCTTCGGTGTACCCATGAACCAGTTGCATGGTTTGCTCCCCTCTGACTTGGGGATTCACCTACCAAAGCTCCAGTACCTCCTCCTAGGCTATAACCACTTTACAGGAAGCCTTCCAGCCTCTATCGCCAATTCAACTGAGATATATTCCCTCGACATATCGTTCAACAACTTCAGTGGAAGCATACCTCCAGAGATTGGAACACTTTGCCCAGACTTCCTCTCATTTGATACAAATCAGCTCATAGCAACTACTGCTGAAGACTGGAAATTCATGACATTCTTGACAAACTGCACACGCCTGCGTATTCTTGACCTCCAGGACAACATGCTAGGTGGCGTGCTGCCAACCTCTGTTTCCAACCTTTCAGCACAACTCCAACTACTATATGTTGGATTCAACAAGATCTCAGGAAATATACCATTTGGCATCAGCAACCTGGTTGGGCTAAATCAATTGCAACTCGCTAATAACCAATTTACTGGTACCTTGCCTGATAACATTGGAAGGCTAAGTTTTCTACATCTCTTGGGCATCGAAAATAACCTATTGACAGGGTTCATTCCATCATCAGTGGGGAATTTAACACAGCTCTTACGTCTTTCCATGGATAACAACATGCTTGAGGGACCTCTCCCAACAAGCATAGGGAACCTGCAGAAGATAACTCTAGCCTTATTTGCACGCAATAAATTTACAGGACCATTGCCCAGAGAGATCTTTAACTTATCTTCCCTGTCATATGCTCTGGTTTTGTCAGGGAACTATTTTGTTGGTCCTCTTCCTCCTGAAGTTGGCAGCTTGACAAATCTTGCATACTTGTACATATCCAGCAACAACTTATCAGGGCCACTACCTAACGAACTTAGTAATTGCCAAAGCTTGATAGACCTCCGGTTGGACCAAAACTTATTCAGTGGTAACATCCCAGAAACTCTCAGCAAACTGCGGGGCTTGACATCGCTGACTTTAACCAAAAACACACTCTCAGGAGTGATTCCTCAAGAGTTGGGCCTCATGGATGGCATGAAAGAATTGTATCTTGCACACAACAACTTATCTGGTCATATCCCAGTAAGCATTGGAAACATGACATCATTGAACCGTCTAGATCTCTCTTTCAACCATCTTGATGGTGAAGTTCCATCAAAGGGAGTGCTCAGTAACATGACAGGGTTCGTATTTAATGGGAATTTGGGGCTCTGCGGTGGTATCCCAGAATTAGGCTTGCCCCCATGTCCGCCAGTGTCCATGGGACACAGCCTAAGGAAAAGTCATCTTGTCTTCAGAGTAGTTATCCCAATTGTTGGCACCATTCTGTTCTTAAGTTTGATGCTTGCTATCTTTGTCTTAAGAAAGAAACCAAAAGCTCAATCTAAAAAGACAATAGGATTTCAATTGATAGATGATAAGTATCCTAGAGTTTCTTATGCTGAGTTGGTCCAAGGAACAAATGGCTTTGCCACAGACAGCTTGATGGGAAGAGGAAGATACGGATCAGTGTATAAGTGTGGTTTGCTGCTAAAAAGTATGATGACCACGGTTGCTGTGAAAGTGTTTGATCTTCAACAATCTGGTTCTTCCAAAAGTTTTCTAGCTGAGTGTGAGGCACTAAGTAAGATCCGCCATCGTAATTTGATTAATGTCATAACTTGCTGTTCAAGCACTGATATAAAGCAGAATGACTTCAAGGCCATTGTTTTTGAGTTCATGCCTAATGGGAGCCTGGATAGGTGGTTACATCTAGATGTGACGGCATCACAACCACCACAAGGTTTGACACTGATCCAGAGATTGAACATTGCCGTTGATGTTGCTGATGCACTAGATTATTTGCACAACAACTGCGATCCACCCATAGTTCACTGTGACTTGAAGCCAAGTAACATTCTTCTTGATGAAGATTTAGTTGCTCATGTTGGTGACTTCGGCCTTGCAAAGATTCTTGCTGATTCAGAAGGTGAACAACCGATTAATTCAAAGAGCTCTATTGGAATACGAGGAACGATTGGATATGTCGCTCCAGAGTATGGGGAAGGCGGGCAAGTTTCTCCCTGTGGAGACGCGTACAGCTTTGGAATTGTCATCCTCGAGCTGTTTACAGGCATGGTACCTACTCATGACATGTTCAGAGATGGGTTAACCTTGCAGAAGCATGTCAAGAACGTATTTCCAGGAATTCTTATGAAGATTGTCGATCCAATACTACTGTCTATTGAAGGAGTTTATACAAGTAATTTGCCCCCTGGAAGAAATGCAATGGAACATATGAACCATGCCATATTGTCTATCATGAAAATAGCTCTCTCATGCAGCAGACAGGCACCAACAGAGAGGATGAGGATCAGAGATGCAGCAGCAGATTTGCGCAGGGTAAGGGATAGCCATGTAAGAGGAAATGAGGAGCATCTAGAACTGTGCAGTGATGTCACTAATCTAGCCAGTGCTTGA More
Protein seq		MNTACCIHFKLTFSPCFPVSTMFASLLLILLHVLQSVSTSTMEYHNTTDENILLAFKAGLSNQSDVLSSWKKSTDFCQWPGVLCSLKHKHRVTVLNLSSESLAGTISPSIGNLTFLKILDLSGNNLDGEIPSSIGRLARLQFLDLSNNSLHGDITSDLKNCTSLQGISLKSNYLTGEIPAWLGALPSLKLIYLQKNSFTGSIPTSLANLSSLQEIYLTMNQLEGTIPEGFGRLSGLKNIHLGVNHLSGMIPTSIFNISSLSCFGVPMNQLHGLLPSDLGIHLPKLQYLLLGYNHFTGSLPASIANSTEIYSLDISFNNFSGSIPPEIGTLCPDFLSFDTNQLIATTAEDWKFMTFLTNCTRLRILDLQDNMLGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVGLNQLQLANNQFTGTLPDNIGRLSFLHLLGIENNLLTGFIPSSVGNLTQLLRLSMDNNMLEGPLPTSIGNLQKITLALFARNKFTGPLPREIFNLSSLSYALVLSGNYFVGPLPPEVGSLTNLAYLYISSNNLSGPLPNELSNCQSLIDLRLDQNLFSGNIPETLSKLRGLTSLTLTKNTLSGVIPQELGLMDGMKELYLAHNNLSGHIPVSIGNMTSLNRLDLSFNHLDGEVPSKGVLSNMTGFVFNGNLGLCGGIPELGLPPCPPVSMGHSLRKSHLVFRVVIPIVGTILFLSLMLAIFVLRKKPKAQSKKTIGFQLIDDKYPRVSYAELVQGTNGFATDSLMGRGRYGSVYKCGLLLKSMMTTVAVKVFDLQQSGSSKSFLAECEALSKIRHRNLINVITCCSSTDIKQNDFKAIVFEFMPNGSLDRWLHLDVTASQPPQGLTLIQRLNIAVDVADALDYLHNNCDPPIVHCDLKPSNILLDEDLVAHVGDFGLAKILADSEGEQPINSKSSIGIRGTIGYVAPEYGEGGQVSPCGDAYSFGIVILELFTGMVPTHDMFRDGLTLQKHVKNVFPGILMKIVDPILLSIEGVYTSNLPPGRNAMEHMNHAILSIMKIALSCSRQAPTERMRIRDAAADLRRVRDSHVRGNEEHLELCSDVTNLASA
Function		Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os11g0490200	Os11t0490200-00	Chr11	17290977	17294288	+	irgsp1_rep
CDS seq	ATGAATACAGCATGCTGCATTCACTTCAAACTAACATTTTCTCCATGCTTCCCAGTGTCAACTATGTTTGCCTCTCTTCTGTTGATTCTGCTGCATGTGCTCCAATCAGTGTCGACATCGACAATGGAATATCATAACACAACTGATGAGAACATCTTGCTAGCATTCAAGGCAGGCCTAAGCAACCAGAGTGATGTCCTATCTTCATGGAAAAAAAGCACAGATTTCTGTCAGTGGCCAGGTGTGCTTTGCAGCCTTAAGCATAAACACAGGGTCACAGTGCTTAACCTCTCCTCAGAGAGCCTTGCTGGCACAATCTCCCCTTCCATTGGGAACCTCACATTCTTGAAAATTTTAGACCTCAGTGGGAACAATTTGGATGGTGAAATACCTTCATCAATTGGCCGTCTAGCTCGATTACAATTTCTTGATTTGTCCAACAACTCACTCCATGGCGACATAACCTCTGACTTGAAAAACTGCACCAGTCTTCAGGGCATCAGTCTTAAATCAAACTACCTCACCGGAGAAATCCCTGCTTGGCTTGGAGCCCTACCAAGTCTCAAGCTCATATACCTGCAGAAGAACAGCTTCACTGGATCCATCCCGACCTCCCTTGCGAACCTCTCGTCGCTGCAAGAAATCTATCTCACCATGAATCAACTTGAGGGCACCATCCCTGAGGGTTTTGGTAGGCTCAGTGGTCTCAAGAACATTCATCTGGGTGTAAACCACCTCTCAGGCATGATCCCAACAAGCATCTTTAATATTTCCTCGCTAAGTTGCTTCGGTGTACCCATGAACCAGTTGCATGGTTTGCTCCCCTCTGACTTGGGGATTCACCTACCAAAGCTCCAGTACCTCCTCCTAGGCTATAACCACTTTACAGGAAGCCTTCCAGCCTCTATCGCCAATTCAACTGAGATATATTCCCTCGACATATCGTTCAACAACTTCAGTGGAAGCATACCTCCAGAGATTGGAACACTTTGCCCAGACTTCCTCTCATTTGATACAAATCAGCTCATAGCAACTACTGCTGAAGACTGGAAATTCATGACATTCTTGACAAACTGCACACGCCTGCGTATTCTTGACCTCCAGGACAACATGCTAGGTGGCGTGCTGCCAACCTCTGTTTCCAACCTTTCAGCACAACTCCAACTACTATATGTTGGATTCAACAAGATCTCAGGAAATATACCATTTGGCATCAGCAACCTGGTTGGGCTAAATCAATTGCAACTCGCTAATAACCAATTTACTGGTACCTTGCCTGATAACATTGGAAGGCTAAGTTTTCTACATCTCTTGGGCATCGAAAATAACCTATTGACAGGGTTCATTCCATCATCAGTGGGGAATTTAACACAGCTCTTACGTCTTTCCATGGATAACAACATGCTTGAGGGACCTCTCCCAACAAGCATAGGGAACCTGCAGAAGATAACTCTAGCCTTATTTGCACGCAATAAATTTACAGGACCATTGCCCAGAGAGATCTTTAACTTATCTTCCCTGTCATATGCTCTGGTTTTGTCAGGGAACTATTTTGTTGGTCCTCTTCCTCCTGAAGTTGGCAGCTTGACAAATCTTGCATACTTGTACATATCCAGCAACAACTTATCAGGGCCACTACCTAACGAACTTAGTAATTGCCAAAGCTTGATAGACCTCCGGTTGGACCAAAACTTATTCAGTGGTAACATCCCAGAAACTCTCAGCAAACTGCGGGGCTTGACATCGCTGACTTTAACCAAAAACACACTCTCAGGAGTGATTCCTCAAGAGTTGGGCCTCATGGATGGCATGAAAGAATTGTATCTTGCACACAACAACTTATCTGGTCATATCCCAGTAAGCATTGGAAACATGACATCATTGAACCGTCTAGATCTCTCTTTCAACCATCTTGATGGTGAAGTTCCATCAAAGGGAGTGCTCAGTAACATGACAGGGTTCGTATTTAATGGGAATTTGGGGCTCTGCGGTGGTATCCCAGAATTAGGCTTGCCCCCATGTCCGCCAGTGTCCATGGGACACAGCCTAAGGAAAAGTCATCTTGTCTTCAGAGTAGTTATCCCAATTGTTGGCACCATTCTGTTCTTAAGTTTGATGCTTGCTATCTTTGTCTTAAGAAAGAAACCAAAAGCTCAATCTAAAAAGACAATAGGATTTCAATTGATAGATGATAAGTATCCTAGAGTTTCTTATGCTGAGTTGGTCCAAGGAACAAATGGCTTTGCCACAGACAGCTTGATGGGAAGAGGAAGATACGGATCAGTGTATAAGTGTGGTTTGCTGCTAAAAAGTATGATGACCACGGTTGCTGTGAAAGTGTTTGATCTTCAACAATCTGGTTCTTCCAAAAGTTTTCTAGCTGAGTGTGAGGCACTAAGTAAGATCCGCCATCGTAATTTGATTAATGTCATAACTTGCTGTTCAAGCACTGATATAAAGCAGAATGACTTCAAGGCCATTGTTTTTGAGTTCATGCCTAATGGGAGCCTGGATAGGTGGTTACATCTAGATGTGACGGCATCACAACCACCACAAGGTTTGACACTGATCCAGAGATTGAACATTGCCGTTGATGTTGCTGATGCACTAGATTATTTGCACAACAACTGCGATCCACCCATAGTTCACTGTGACTTGAAGCCAAGTAACATTCTTCTTGATGAAGATTTAGTTGCTCATGTTGGTGACTTCGGCCTTGCAAAGATTCTTGCTGATTCAGAAGGTGAACAACCGATTAATTCAAAGAGCTCTATTGGAATACGAGGAACGATTGGATATGTCGCTCCAGAGTATGGGGAAGGCGGGCAAGTTTCTCCCTGTGGAGACGCGTACAGCTTTGGAATTGTCATCCTCGAGCTGTTTACAGGCATGGTACCTACTCATGACATGTTCAGAGATGGGTTAACCTTGCAGAAGCATGTCAAGAACGTATTTCCAGGAATTCTTATGAAGATTGTCGATCCAATACTACTGTCTATTGAAGGAGTTTATACAAGTAATTTGCCCCCTGGAAGAAATGCAATGGAACATATGAACCATGCCATATTGTCTATCATGAAAATAGCTCTCTCATGCAGCAGACAGGCACCAACAGAGAGGATGAGGATCAGAGATGCAGCAGCAGATTTGCGCAGGGTAAGGGATAGCCATGTAAGAGGAAATGAGGAGCATCTAGAACTGTGCAGTGATGTCACTAATCTAGCCAGTGCTTGA More
Protein seq	MNTACCIHFKLTFSPCFPVSTMFASLLLILLHVLQSVSTSTMEYHNTTDENILLAFKAGLSNQSDVLSSWKKSTDFCQWPGVLCSLKHKHRVTVLNLSSESLAGTISPSIGNLTFLKILDLSGNNLDGEIPSSIGRLARLQFLDLSNNSLHGDITSDLKNCTSLQGISLKSNYLTGEIPAWLGALPSLKLIYLQKNSFTGSIPTSLANLSSLQEIYLTMNQLEGTIPEGFGRLSGLKNIHLGVNHLSGMIPTSIFNISSLSCFGVPMNQLHGLLPSDLGIHLPKLQYLLLGYNHFTGSLPASIANSTEIYSLDISFNNFSGSIPPEIGTLCPDFLSFDTNQLIATTAEDWKFMTFLTNCTRLRILDLQDNMLGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVGLNQLQLANNQFTGTLPDNIGRLSFLHLLGIENNLLTGFIPSSVGNLTQLLRLSMDNNMLEGPLPTSIGNLQKITLALFARNKFTGPLPREIFNLSSLSYALVLSGNYFVGPLPPEVGSLTNLAYLYISSNNLSGPLPNELSNCQSLIDLRLDQNLFSGNIPETLSKLRGLTSLTLTKNTLSGVIPQELGLMDGMKELYLAHNNLSGHIPVSIGNMTSLNRLDLSFNHLDGEVPSKGVLSNMTGFVFNGNLGLCGGIPELGLPPCPPVSMGHSLRKSHLVFRVVIPIVGTILFLSLMLAIFVLRKKPKAQSKKTIGFQLIDDKYPRVSYAELVQGTNGFATDSLMGRGRYGSVYKCGLLLKSMMTTVAVKVFDLQQSGSSKSFLAECEALSKIRHRNLINVITCCSSTDIKQNDFKAIVFEFMPNGSLDRWLHLDVTASQPPQGLTLIQRLNIAVDVADALDYLHNNCDPPIVHCDLKPSNILLDEDLVAHVGDFGLAKILADSEGEQPINSKSSIGIRGTIGYVAPEYGEGGQVSPCGDAYSFGIVILELFTGMVPTHDMFRDGLTLQKHVKNVFPGILMKIVDPILLSIEGVYTSNLPPGRNAMEHMNHAILSIMKIALSCSRQAPTERMRIRDAAADLRRVRDSHVRGNEEHLELCSDVTNLASA More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_11g0490200	RBH	0.075493	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os11g29790	RBH	0.103580	0.054130	0.148126
Nipponbare \| IRGSP 1.0 \| RAP-db	NA	NA	NA	NA	NA
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_11g0014330	RBH	0.064509	0.0	0.196107
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_11g0014320	RBH	0.0	0.937035	0.295630
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_11g0014270	RBH	0.000000	0.000000	0.408773
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_11g0014060	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_11g0014350	RBH	0.645249	2.135500	1.048938
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_11G0268400	RBH	0.3968795	1.2657175	0.8301995
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_11g0014560	RBH	0.102310	0.0	0.994583
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_11G0281000	RBH	0.6965635	1.054025	0.994688
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_11g0014470	RBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_11g0014460	RBH	0.220429	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_11g0014100	RBH	0.990499	2.229682	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_11g0013950	RBH	0.056996	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_11g0004850	SBH	0.056974	0.000000	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_11G014040	RBH	0.000000	0.0	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_11g0014250	RBH	0.394882	0.000000	0.592286

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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