Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0226100 | OGI:11019800 | 2/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:6594662-6595795 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TGGATCATAATCAGTTGAGTTTAGATGACCTAGAGGTAATCAAAGTGATCGGAAAAGGTAGTAGTGGAGTGGTGCACTTGGTTCGTGACGGACAGACTGGCCATTTTTTTGTTCTAAAGGTATTATATATTTGAAAGTGCATTCTTTGCTTTATATTATGATTTCTTCCACTTCTCTCAGAGTTTTAGCTATAATTTGACATATTCCTGACAGTTGTAACTTCATATAAGATCAGTTATGTTTTCATGGGTCTTTTGCAGGTTATACAACTAAATATCTAGGAGAGCATACGCAAACAGATTGCCCAGGAGTTGAAAATTAGCTTGTCAACACAGTGCCAGTATGTTGTTGCATGTTATCAGTGTTTTTATGCCAACGGTATTATTTCAGCTGTTTTCGAGTACATGGACTGCGGGTCTCTCTCAGATTTACTGAAGACAGTTATAACAATTCCAGAGCCCTACCTTGCTGCAATCTGCAAGCAGGCAAGTTACATGTGGTAGAAGCTACCACACGATTTCTTTGCTTCGATACTCACTTTACCTTATAATAAAAAGAATTAATCTTTCTTGTGCAGCTCTTAAAAGGACTGATGTACTTGCATCATGAGAAGCATATCATACACCGAGATCTAAAGCCATCAAATATACTAATAAATCACTGGGGAGAAGTAAAAATATGCGATTTTGGTGTTAGTGGCATCATTAATGGTCTGTGTGCAAAACGAGATTCATTTACTGGAACATATAACTACATGGCGGTGGGTAAAAGTTTTTATGTTATTAAATGTGTCACTGAGTTTGGCATGAAATATTATCCATTTTTTTTGTTTATAATTGGACCAAAGGAAATTTCTGTTCTTGACAGCCAGAAAGAATCAGTGGGCAGGAACATGATTATATGAGTGATATCTGGAGCTTGGGCCTTGTTATGCTGGAATGTGCCACGGGTCATTTTTATATCCTTCCGTTCAAAACTGTTATGAACTCCTTGAAGCTTTTGTTGACGGACCAGCACCTTCTGCTTCATCAGACCACTTTTCAGAGGAATTCTGTTCATTCATCTCTGCATGGTAACTCTGCATCTTTCATGATTTCTCTGATTTCCTTTTTCCAACGGAAGTTACAATTGTAG
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| CDS seq | GAGAGCATACGCAAACAGATTGCCCAGGAGTTGAAAATTAGCTTGTCAACACAGTGCCAGTATGTTGTTGCATGTTATCAGTGTTTTTATGCCAACGGTATTATTTCAGCTGTTTTCGAGTACATGGACTGCGGGTCTCTCTCAGATTTACTGAAGACAGTTATAACAATTCCAGAGCCCTACCTTGCTGCAATCTGCAAGCAGGCAAGACTGATGTACTTGCATCATGAGAAGCATATCATACACCGAGATCTAAAGCCATCAAATATACTAATAAATCACTGGGGAGAAGTAAAAATATGCGATTTTGGTGTTAGTGGCATCATTAATGGTCTGTGTGCAAAACGAGATTCATTTACTGGAACATATAACTACATGGCGCCAGAAAGAATCAGTGGGCAGGAACATGATTATATGAGTGATATCTGGAGCTTGGGCCTTGTTATGCTGGAATGTGCCACGGGTCATTTTTATATCCTTCCGTTCAAAACTGTTATGAACTCCTTGAAGCTTTTGTTGACGGACCAGCACCTTCTGCTTCATCAGACCACTTTTCAGAGGAATTCTGTTCATTCATCTCTGCATGGTAACTCTGCATCTTTCATGATTTCTCTGATTTCCTTTTTCCAACGGAAGTTACAATTGTAG
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| Protein seq | ESIRKQIAQELKISLSTQCQYVVACYQCFYANGIISAVFEYMDCGSLSDLLKTVITIPEPYLAAICKQARLMYLHHEKHIIHRDLKPSNILINHWGEVKICDFGVSGIINGLCAKRDSFTGTYNYMAPERISGQEHDYMSDIWSLGLVMLECATGHFYILPFKTVMNSLKLLLTDQHLLLHQTTFQRNSVHSSLHGNSASFMISLISFFQRKLQL |
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| Function | Mitogen-activated protein kinase kinase 1 [UniProtKB/Swiss-Prot:Q5QN75] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0226100 | Os11t0226100-00 | Chr11 | 6594662 | 6595795 | + | irgsp1_rep | ||
| CDS seq | GAGAGCATACGCAAACAGATTGCCCAGGAGTTGAAAATTAGCTTGTCAACACAGTGCCAGTATGTTGTTGCATGTTATCAGTGTTTTTATGCCAACGGTATTATTTCAGCTGTTTTCGAGTACATGGACTGCGGGTCTCTCTCAGATTTACTGAAGACAGTTATAACAATTCCAGAGCCCTACCTTGCTGCAATCTGCAAGCAGGCAAGACTGATGTACTTGCATCATGAGAAGCATATCATACACCGAGATCTAAAGCCATCAAATATACTAATAAATCACTGGGGAGAAGTAAAAATATGCGATTTTGGTGTTAGTGGCATCATTAATGGTCTGTGTGCAAAACGAGATTCATTTACTGGAACATATAACTACATGGCGCCAGAAAGAATCAGTGGGCAGGAACATGATTATATGAGTGATATCTGGAGCTTGGGCCTTGTTATGCTGGAATGTGCCACGGGTCATTTTTATATCCTTCCGTTCAAAACTGTTATGAACTCCTTGAAGCTTTTGTTGACGGACCAGCACCTTCTGCTTCATCAGACCACTTTTCAGAGGAATTCTGTTCATTCATCTCTGCATGGTAACTCTGCATCTTTCATGATTTCTCTGATTTCCTTTTTCCAACGGAAGTTACAATTGTAG
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| Protein seq | ESIRKQIAQELKISLSTQCQYVVACYQCFYANGIISAVFEYMDCGSLSDLLKTVITIPEPYLAAICKQARLMYLHHEKHIIHRDLKPSNILINHWGEVKICDFGVSGIINGLCAKRDSFTGTYNYMAPERISGQEHDYMSDIWSLGLVMLECATGHFYILPFKTVMNSLKLLLTDQHLLLHQTTFQRNSVHSSLHGNSASFMISLISFFQRKLQL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0226100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11880 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0212900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007980 | SBH | 0.488314 | 18.531998 | 5.753318 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007990 | SBH | 0.460925 | 4.499553 | 2.513865 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007860 | SBH | 1.258987 | 7.152298 | 7.234213 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0001040 | SBH | 0.466459 | 0.092149 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0001030 | SBH | 11.696715 | 2.561283 | 15.097278 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0057700 | SBH | 0.622835 | 2.463428 | 0.987793 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004570 | SBH | 0.000000 | 0.0 | 0.083726 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0114100 | SBH | 11.139939 | 7.5498485 | 0.3207445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0000910 | SBH | 0.380591 | 0.163538 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007870 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0001030 | SBH | 14.708450 | 11.289748 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0001030 | SBH | 0.885321 | 0.0 | 2.173508 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0001060 | SBH | 0.561170 | 4.157346 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G001040 | SBH | 0.612360 | 0.000000 | 0.890986 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007760 | SBH | 0.436219 | 25.846172 | 2.030954 |
