Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0007990 | OGI:11019610 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:6802803-6815550 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggatggtccggcgagcttctccctaggtgcctcgattcaatagaagcccaaagaggtgcatatggtacccaaataaggataggatagatatgtcaaaagcaggtctgattacacctattcctaatcctaaatagaatgtaaggacgtggggatttctatgtaaacagagtatcctatttccataggctcgaatgacatgggccctctcctcaggaagctcgattcgcttctggtggctcccgaaatccgatggagtttgaagggttgttgcagcctttggggatctcgtaccgggtctcactctacacggacgatgtggtcaccttcattcggccgacggtggaggagattcgtgctgcgatggaggtgctctccatcttcggggaagcatccggtcttcgaacgaactttgctaagtgttcgacacttccaattcaatgcaatgaggcggacctccaaatccttcaagatgaacagccttgccaggtcgcttccttcccttgcacatacctggggttgcttctctccatcttccgcctaaagaaagaggacttgcaaccgctaattgacaaaatcggtcgtcgtcttccgctttggatgtcgcacttgatgacgtccatcggccGggcaaccatggtgaacgctgttttgagctcaatcccaatttatttgttaatggcgatcaatgcaccgaaatgggtaatcaaggggatcgacaaaatccgtcgcggttttttgtgggccgggaaagctttggtgagtggtggcgcatgccgggttgcttgggctcgggtatgctctccaacggaatatggtgggctgggcttccccgatctcgagaggatgggacttgccgagggttcgacacaattgcgacactggtagcgtggacaatctggaaggaaagaaacaactggatcttcaaccagaagagcagatcttggatggagatagctagggctatgacggggggaagcggacctttggcggatggctagatcagccataccgaccatggtagtcccttacatgggtcgccaaatccttcggaagattaggcttttgtttttctttccccctcctgtaccctgtcccatttacttttattttttccggcccgctctatacatacatttattcctcttaatacaaaaatgcacgtctcgcgtattcccaaaaaatccggctgcctaagccatagagacttccgaagtgcattattcagctccgcaaactctgcattttgaaagtttctgttagagaacttctggtaagtgatatttacatcctcacagaattaccttccctcagagctctctcacttcgtgtccagacagctcctgagggaaagatcatcttcagtgagggagcactaccagttctcaggtattttagatttgaatgtggtgttctctgcctggagttcagacctggagcaatgcccaatcttcagagactcaagctaggcttcaatactgaacaggagaattatgtcaatatgcttgctggaattgagtacctttcaaacctccagcatattgctgcacgaattgggccaaatgccagtgttgatgaatttgataggagggctgtggattcagcattcaagaaagctatcaccaagcacccaaggtgtcctagcttcaatgtacaatgggtggcttcgagtaaggaagagtggcatccttcagagaaacagcagcagagtcaagaaaaaggctcatcatctggagaatatgtgactatcaaaacaggatcagcagaagatactgataagaacgttcttaCcgggcatagaatctttcctcaaccatcaggtaaggcgcattcaagcacgcaacataaagggtcattagctggacaagattggactatagagaaagaatcagtacaagatatgacgaaggaatcttttacagtgctccatcaaacctctaggacggtaagagccataataaatcatagccgctaattatgcatataatttttctaataaggtgtatttttgtaacatatcttggttcagaaaagaaaatgatatcaaccctcttagctgtcctttctaaacataatgtttaactatgcatatgctagtaattaggttaggtgatagtagtactaattttgcaacagctggccatagttttatgtgatttaacagctgaccatattttttaagaggttttctcccatccttgaagaagtatatacctccttAtacttgagagttacctttccattaagtgaggtatgaaaactaattttacaggttggagtaggattggaaacctatctttatatatgttcctgaccttttacttttgttatgttttttagaggttgttattcatgaggtatatacctccactttgtgggaggtattctctctattctataaaaatccaacttctggctatgaatctagacatatcctacgtccagattcttagccaaaagttgaatttttattggactgagagagtattggtatttatgttagtcaaaaggtgcatgcttctacaggaggtatatacgtcctgctaacactatgagatatatatacatctctatacctccaaagaatcagaaaactcttaccattgacaattgtaaactggtttcaTtttttatctatcaaatagttcgaaggtatatacctaaaggataagagaaaatcaataattttaattatcttgcatatacatttgaagtatcaactctatagtgtatgaaaatgaaatcactgtaacaccccaggacccacatagcccagtatgctccttaactacgctagaagaagctaagttataaaaaacttctggaaagaaaatagtgcaatacagaagcaaaatgtaaagcacgataaccaccatttattgactcaagataattgacatgaataaaaCatattccgtctgtcctaaaatatagcaatctaatactgaatttttagacacaacttagtagtaagcatctagatatattcttatgtcaccatttccatgttctacttgatctccacaacaattacagcaatgccaatttgccaacaaactagccacgcagtatgcgcaacgattgaggcaatcttcaaacccaatctgacatttagtagaacatgagcgccaccttacccatctcctggactgctgctggaccatgcttcttcccctagcatgcgcccatagcagagatccagaccaccacctcttcctcttcTcctcctggacgaatggattgtgcaagctcaatgtaccagtaggcctgcgactccaagtttacatgtgtgaagcctcagagcaatcccgcagctagaatggtgtccatagcattaagtggtatgccacctagatcaaaagatgatttgacaccatatcaaatgtgaaaagaggagaggaggaaactgtgtcttgcatcataagagaaattgggagaggaactggtggcactaaattagcgcattagattaatattatgtgcactttgatggatgatatagacattactagtatagttcgatttagggatttgggaattggtgtgttgccctggccgcagccgcacacgtctttatttagcatgtttgtaagtaggtcctcaacagtattacgtaatacaccatcaccactgttatctgcttattagattgtgtttttttccttttgtgccctcacattctttctattggtatgctaaaaccgttgcagacaaatcatatggagccattggatcataatcagttgagtttagatgacctagaggtaatcaaagtgatcggaaaaggtagtagtggagtggtgcacttggttcgtgacggacagactggccatttttttgttctaaaggtattatatatttgaaagtgcattctttgctttatattatgatttcttccacttctctcagagttttagctataatttgacatattcctgacagttgtaacttcatataagatcagttatgttttcatgggtcttttgcaggttatacaactaaatatctaggagagcatacgcaaacagattgcccaggagttgaaaattagcttgtcaacacagtgccagtatgttgttgcatgttatcagtgtttttatgccaacggtattatttcagctgttttcgagtacatggactgcgggtctctctcagatttactgaagacagttataacaattccagagccctaccttgctgcaatctgcaagcaggcaagttacatgtggtagaagctaccacacgatttctttgcttcgatactcactttaccttataataaaAAGaattaatctttcttgtgcagctcttaaaaggactgatgtacttgcatcatgagaagcatatcatacaccgagatctaaagccatcaaatatactaataaatcactggggagaagtaaaaatatgcgattttggtgttagtggcatcattaatggtctgtgtgcaaaacgagattcatttactggaacatataactacatggcggtgggtaaaagtttttatgttattaaatgtgtcactgagtttggcatgaaatattatccattttttttgtttataattggaccaaaggaaatttctgttcttgacagccagaaagaatcagtgggcaggaacatgattatatgagtgatatctggagcttgggccttgttatgctggaatgtgccacgggtcatttttatatccttccgttcaaaactgttatgaactccttgaagcttttgttgacggaccagcaccttctgcttcatcagaccacttttcagaggaattctgttcattcatctctgcatggtaactctgcatctttcatgatttctctgatttcctttttccaacggaagttacaattgtagcagtaacaataggttttaacttttcggttacaatcatgtgcttccaatattgtgcggcatgtgccctactgcttatcttgaaacatttcgttaaaattacatgttaacctgctaggcttggcatcttcatattcgcatggtcttgccaatctaaaaagactaataccagtcaggggcgggcccactatgtattcaagggtattcagatgtatacccaaaattttaggaaaaaaaaaaggTAtatatactatatagttcatataggtattcaaaaaaataaaaagaaagcttaaactgcttatattgggccttgctttcccatttcttctctattgggcctaaatttcccactcccgtccctctttcctctcaacctgtggtctaattgggccacatctcagcccattcgcaattttccccaattccccacccgcctggtgccctggccacccaaacctgcaaaccctagaccacagcacgaccacgggaggaggcgtgcggcGGgggctgcgtgcggcgaccggcggcgggggccgtggaggcgtggagcggcgtacagcggcgggaggcgtgcagcaatggagcggttgcagcggcgcgggcgcggcgcggcggcggcgaccggtgagccgccaaggccaagcccgtgaccggcgggcgcaccgtgaccgacggcgtgccgcgtgcggcagccggcaggggcccaggaggcagccaggcaggaggccaggagcagatgctgcacagctgcagcctgcaggtcagcgtccggcgttccgcgccggcgcgccgaggcccgaggcagccggcggctgctcgctgcggccgtgcggcgccctgctcgccggaggctgcctgccctgcaaattccggacaagcacagtgagtgactaaactccggacaacgggacaagcacaaaaattcattgatttagacatttagtattttagtgtacttgcttgatttagacatttagtttgtaggattgtagttgctagttgcctatttgagtaattgagtaattgagtagtggtctgttggaccactactcaattttagtatttctatacgctaaacaatttctatatgtttggtatttgtattcacaggattgtagttgactagttgcctatatggtacactaataactccatatgtttggtattagtatttctatatgttaaacaatttctactgatgatcaattctatcactgtgtgaacttatgatcaattttatgttctatacgttataaattataattattagtgtatcataatatacaagcccattttttggcttttaggtgtatgaacaatttttttaccccttcccatttcgaatacacaagtttaaaaagctgggcccgccactggtataagttttataaaccatagaaacgaacagggctaatattcagttcctctttcttctgtttggttgtgtgcactccttgggtgcagaggccggaggtgcttgaaaacactactCcctccgttatataatataagaaattgtagagttggacacggttattaagaaagtaggtagaagtgaatggtggagagttgtgattggatgagtagtagaggactagaggtaggtgggaaaagtgaatggtggagggttgtgattagttgggaagagaatgttagtggagaagttgttataTtttgggacggagggagtatgagtttaataaaacttccataatctaaaaagatattcagttcctctgttttttctgttgaatttcagtgtccaaaagaaggcttcagataggtcgtctgcaaaattcttattggtaagttaaaattctgttccgcatttcttgttcatttgcaaggctgcttcttcaccttctacgctgtctttgttattcagactcacccattcctgagcttgtatagcgacatggacatagatcttgcttcatacttcaaaatcactggatctccgtttgacaccttcagttcaagtaagataaaagtaacttgtctttttatctggcattgattttgtcatagacacatgtaaagaccattatccaatggatgatagataattctcattggtcattctttttttttttcggtgttcattttgtcatagatgcatgttactaccattctgaaggtaattattttggcttgtcaatcagagtggtgaattcagcagacaaaataacaagtcagagataaagtcacagctcacaagcaaaccaacattacagtcatcgcaaggcatcacagataacttcccaagtgaacaagattttgagcatggtgcatttaaagggccttatgtggtacggtcctacttgtacatattattttccaaccttcctccacttcaccataattaattaaaaaatccacctttatatatgttaagaaggatgtacagtttgacttccctagatgattgctgtgaagaagcatgagagaatatgaggagttcatgacagacggtttcagaaatatgttttgaaagacaatggtgaagttactctgttatgaatatccccaatggaagccttgacaaatatattcacaatccttgaattcttgtggtttcaaatgatggaagtaacagcaagtaagctttccgagaagtcgcaattgaaataacaggggaaactgctgctgcaagcgataatcacaaaaccacccgtgaaatcactatgcaaggattatctgaccagaggcatgaatccgaagagttctatatatgaatgcaaatcggactttggtgaagtattccatagtggatagattgagatggaatttaattaagggagaaatgaacattcacttttcactttccctctatcctatatttcttatgatctttttgtaaacaattagccttactttatttgtaacaatcagttatatgaagggagaataataatacataaataaataaatacgtcttccaaacatgtctaagtctttggaaaatctctttctttttttttcaaattgttgtatcaattgaatggtgaatgctcaatacattatttttttagaactctcaatacattgaaaacaattgtttttctaacactgcaaaaatccaagaagtcctttagaccaccttatatccaggttttcttatgtgggggcaagatcaagaaccatcttgacaccagacaccatagtcaattaatcgtacattggtgactgtctcaggtttactgctgttcttgttcttgaggggaaaaaaaaagacaactttcaccctggattccaAGagagaaaaaaaagacacatcacatgcaacactaggggaaaaaaaaagacaactttcaccctggattccaagagagaaaaaaaagacacatcacatgcaacactatggttgtgcttagttcagtgtaaagtttggattttggttgaaattagagatgatgtgactgaaaagttgtatgtatgacaggaattgtatctatgacaggttgatgtgatgtAaaaggactgaagtttggatccAaactttagatctaaacacagcctataccaagtggcccctggttcggtgcacagcttgcaattggcagaatagttccacagtcaactactattttactccctccatcctataatataagggatttttactttttgcttgcactgtttgaccattcatcttagaaaaaaaaatttgaattatatttattttatttgtgacttactttattattcaaagtactttaaacataaattttcgttttttatatttgcacaatttttttaaaatatgacgagtggtcccttatggatggagagagcacattatgggacgacgactctccattgggtggctgagtcaagtcaacctgttcacactggccgcttctcccgtcagggaacaattgctcatcttctccaactcttcccctcctcgattgaatcggaatcggaacaagattaacctcctgcagccaaattgctcttcaggttagtgcccctgcagctgcaaactctgggctctgctcacatggtttctttgatgagcttgttcttgtttcttctcttcttctgaaagggcttctccgattttgggcaatcagaaatgaagggtgaatccagcacacaaaataaggcggggaacaagtcacagtatccaattactattccaaagaatccaaccttagattctttgaaagtcatcacagataatttctcaagtaaacgagaaatcgggcgcggtgcatttggagtGGtttataaggtacagttacacacattgttccccaacatttctcaacttcagcaaaatcaattcatagtgataaatccatctctatgtatgtaaaacagggtgttcttgagaatggggaggtgattgctgtgaagaagctcgagagaacatcaggaattcatgccagacggtttcagaacgaggcaaacaacctcctggagttggagcacaagaatgtagtgaagttgattggttcttgctgccaagcagaaaggcaagtagttgagcatgatgggaagtatgttttcacagatgtggtggagaagttactctgctatgagtatctaccgaatggaagccttgataactatatctacggtaacacaatccgccacaagctcatagtcatagatttacaccttctttttctttcatcatgggtcaaaatatcagtgccactgtatttcatcaacatcttcatttaaaacaacataagagaaggataaccttttttatacctatccataggagtagtaaaatgcacacacaggaagttcattaaaaatattacataaagagatggatggcttcagaggataatgttttaaaagcttcttacgttcagatgaattgaatggaattgattggcccacgcgtttcaaaataatcttgggtatttgcaacggtttacattttctacacaaggagcggaatgaagctattattcacatgaatcttaaaccaagcaatatattattgggtgacaatatggtgccaaaaattgctgattttgggctgtcaaggctctttggtcaagagcaaaCccCGACTTATCACCCAAAATGTTGTCGGATGGATGTAAGATAAATTCAAACCTTGTAATTCCATATATTTTCCTTCTTTGTGTTCAATTGTTACATTTGCATTAAACCCATAATGCTTAGCTCATACCTTTTTAATTCCACTCAGAGGATACATTGCCCCAGAGTATTATTATAGAGGTGAAATATCAGAGAAGTCAGACATATTCAGTTTGGGTATTCTTATTCTTGAGATAGTCACAGGATTGAAAAACGACTCTACCTCTCAAGAAGTTTCATCCAGGATTCTTATTGACAATGTAAGAGATATGTATTAACGATGTGGAGAAAGATGTTGATATATATCATAGTTCATCCTTTCATCTGGGTTATGCTGTCTTGTTCTGCAGGTACGGAGGAAATGGTTAAAATCATCACAAATAACGTCAAGGTACCCATCACTAGAAGAAGATGACATCCTACAGGCAAAAAGATGCATCGAAAGTGGGTTAAACTGTGTGGAGACCGATCCAAAGaaacgacctactataagtgaaattattgtaaaactcacagataaaggaacaggtcaggaaaccttatttttgtgtcttgatttttttttgccaggtcggcggaagttttgtgtcttgatttgttataaatatttattagtctagatgttttggaagcttgtaataagtggcattgttacaaaaacaaagttcttatttaagaaaagtttcattcaagcagttattggtgatgaagcgatcatacatgaagaaatggagaaaaggcaaaaattcgtaagtacgctaacaagaaacccgaagttacagtttttggaagatataacaaacaatttctcccatgagcgagaaattggtagaggttcttttggggtggtttacaaggtatgtttggcttatatttttatcctttattaaaataaatcaatggctacagagtatatccattgtatttgactacactaactacagaagttaagcagggtgtgcttccaaatggggaactagttgctgtaaagaagcttctagacagtgtgactgcagttaatcaagacaaacagtttcagagtgaggctggtattcttattgatctcaatcacaagaatatagtaaagttgattgggtattgttatgaaatacggaaggaagttgtggagaacaaccgaaaatttttctttgtggaaacaccaaaaaagttactctgctacgagtatttgcctacagggagtcttgacaagtatatttatggtatgatcctctgcacacttccatccaattcccatgtaaattaactgaatgctactccccttctatttatcaacttgtgttcaaagacagttagcagtgatataaagtagaggttaaaaataatcctagaaacatctacttatccgaacattgacagatatactgatgcaaaactctcaacattcttgtttgaaagtgaccttattgtattcatttctacaggtgaatccaatgaattaaaatgggacatgcgcttcaaaattattgaagggatatgtcagggtttaaagttcttacatgagttgaaaagacccattattcatctagatctgaaacctggcaatgtattgttggatgataatatgatgccaaaaattgcagattttggcctatcaaggctcttaggcgaagaacaaacacgaactcgtactttaacagttgtcggatccatgtaagctcaatccttataataacctccatattttcattattgaagatttattgtttcccattgcatttccaatcctatagcaattaaaatattagtgtttctgtaattcagaggatacattgccccggagtatcgttacagcggtgaaatctcaaccaaatcagacatattcagcttgggtgttttgataatcgagatagtgactgggttaaaagtcaattcgagtagccaagatgttacttcAaagggcttcattgaaaatgtaagatagagtatctttctacttgaagctcaataatcttgttttgaaaatgatcactatactgtcaatttgtattctttcttcagtctctctactaaaattttgcaggtacgtaataactgggcgaaaatgccacagatagcttccaactatccattattggaggcaaactgcctccaagaagtaaaaaggtgcatcgatattgcgcttgcttgcgtagacaaaaatccaaaggggagaccttctattggggaaattattgacagacttaattggagaaaaggctaggcctgtgtggcacagctccagctccagctccacctctcctggagttggagctcagccaaacagtttcagctccaccaaaactaggagtggagctgggtggagctctctcacaaaatgaactagagttgtggagctgggtttaggcagctccacaactccactccagactcaactcctggagctaaatttagaagttggagctgtaccaaacaggccctaaatgatcatctaacatctactaggtgaaaacacttcagctttttatatagataatgccaacactgcagctgaatatgttcttccagatctagcataaatgtcgatctttttcattgtacattgttggaagctgcttggcaagggtcacagtgaccgacggtggtagctcttgaaggaagtgccaaaaatctgaagctgaacaaatcttgagtgaatccagtttctccgaatatagatcttcctgcagtcatgacttcctgctgcatataggtctttaatgctggtggcatgaatgtatgatcggtcatcttaatcacctttttgtttatgagagatgcttgatgcatgctccacggcaataatctccttttattttctt
More
|
||||||||||
| CDS seq | atggatggtccggcgagcttctccctagaattaccttccctcagagctctctcacttcgtgtccagacagctcctgagggaaagatcatcttcagtgagggagcactaccagttctcagacctggagcaatgcccaatcttcagagactcaagctaggcttcaatactgaacaggagaattatgtcaatatgcttgctggaattgagtacctttcaaacctccagcatattgctgcacgaattgggccaaatgccagtgttgatgaatttgataggagggctgtggattcagcattcaagaaagctatcaccaagcacccaaggtgtcctagcttcaatgtacaatgggtggcttcgagtaaggaagagtggcatccttcagagaaacagcagcagagtcaagaaaaaggctcatcatctggagaatatgtgactatcaaaacaggatcagcagaagatactgataagaacgttcttaCcgggcatagaatctttcctcaaccatcaggtaaggcgcattcaagcacgcaacataaagggtcattagctggacaagattggactatagagaaagaatcagtacaagatatgacgaaggaatcttttacagtgctccatcaaacctctaggacgacaaatcatatggagccattggatcataatcagttgagtttagatgacctagaggtaatcaaagtgatcggaaaaggtagtagtggagtggtgcacttggttcgtgacggacagactggccatttttttgttctaaaggagagcatacgcaaacagattgcccaggagttgaaaattagcttgtcaacacagtgccagtatgttgttgcatgttatcagtgtttttatgccaacggtattatttcagctgttttcgagtacatggactgcgggtctctctcagatttactgaagacactcttaaaaggactgatgtacttgcatcatgagaagcatatcatacaccgagatctaaagccatcaaatatactaataaatcactggggagaagtaaaaatatgcgattttggtgttagtggcatcattaatggtctgtgtgcaaaacgagattcatttactggaacatataactacatggcgccagaaagaatcagtgggcaggaacatgattatatgagtgatatctggagcttgggccttgttatgctggaatgtgccacgggctgcttcttcaccttctacgctgtctttgttattcagactcacccattcctgagcttgtatagcgacatggacatagatcttgcttcatacttcaaaatcactggatctccgtttgacaccttcagttcaagtaagataaaaagtggtgaattcagcagacaaaataacaagtcagagataaagtcacagctcacaagcaaaccaacattacagtcatcgcaaggcatcacagataacttcccaagtgaacaagattttgagcatggtgcatttaaagggccttatgtgggcttctccgattttgggcaatcagaaatgaagggtgaatccagcacacaaaataaggcggggaacaagtcacagtatccaattactattccaaagaatccaaccttagattctttgaaagtcatcacagataatttctcaagtaaacgagaaatcgggcgcggtgcatttggagtGGtttataagggtgttcttgagaatggggaggtgattgctgtgaagaagctcgagagaacatcaggaattcatgccagacggtttcagaacgaggcaaacaacctcctggagttggagcacaagaatgtagtgaagttgattggttcttgctgccaagcagaaaggcaagtagttgagcatgatgggaagtatgttttcacagatgtggtggagaagttactctgctatgagtatctaccgaatggaagccttgataactatatctacgatgaattgaatggaattgattggcccacgcgtttcaaaataatcttgggtatttgcaacggtttacattttctacacaaggagcggaatgaagctattattcacatgaatcttaaaccaagcaatatattattgggtgacaatatggtgccaaaaattgctgattttgggctgtcaaggctctttggtcaagagcaaaCccCGACTTATCACCCAAAATGTTGTCGGATGGATATAGTCACAGGATTGAAAAACGACTCTACCTCTCAAGAAGTTTCATCCAGGATTCTTATTGACAATGTACGGAGGAAATGGTTAAAATCATCACAAATAACGTCAAGGTACCCATCACTAGAAGAAGATGACATCCTACAGGCAAAAAGATGCATCGAAAGTGGGTTAAACTGTGTGGAGACCGATCCAAAGaaacgacctactataagtgaaattattgtaaaactcacagataaaggaacagttattggtgatgaagcgatcatacatgaagaaatggagaaaaggcaaaaattcgtaagtacgctaacaagaaacccgaagttacagtttttggaagatataacaaacaatttctcccatgagcgagaaattggtagaggttcttttggggtggtttacaagggtgtgcttccaaatggggaactagttgctgtaaagaagcttctagacagtgtgactgcagttaatcaagacaaacagtttcagagtgaggctggtattcttattgatctcaatcacaagaatatagtaaagttgattgggtattgttatgaaatacggaaggaagttgtggagaacaaccgaaaatttttctttgtggaaacaccaaaaaagttactctgctacgagtatttgcctacagggagtcttgacaagtatatttatggtgaatccaatgaattaaaatgggacatgcgcttcaaaattattgaagggatatgtcagggtttaaagttcttacatgagttgaaaagacccattattcatctagatctgaaacctggcaatgtattgttggatgataatatgatgccaaaaattgcagattttggcctatcaaggctcttaggcgaagaacaaacacgaactcgtactttaacagttgtcggatccataggatacattgccccggagtatcgttacagcggtgaaatctcaaccaaatcagacatattcagcttgggtgttttgataatcgagatagtgactgggttaaaagtcaattcgagtagccaagatgttacttcAaagggcttcattgaaaatgtacgtaataactgggcgaaaatgccacagatagcttccaactatccattattggaggcaaactgcctccaagaagtaaaaagctgcttggcaagggtcacagtgaccgacggtggtagctcttga
More
|
||||||||||
| Protein seq | MDGPASFSLELPSLRALSLRVQTAPEGKIIFSEGALPVLRPGAMPNLQRLKLGFNTEQENYVNMLAGIEYLSNLQHIAARIGPNASVDEFDRRAVDSAFKKAITKHPRCPSFNVQWVASSKEEWHPSEKQQQSQEKGSSSGEYVTIKTGSAEDTDKNVLTGHRIFPQPSGKAHSSTQHKGSLAGQDWTIEKESVQDMTKESFTVLHQTSRTTNHMEPLDHNQLSLDDLEVIKVIGKGSSGVVHLVRDGQTGHFFVLKESIRKQIAQELKISLSTQCQYVVACYQCFYANGIISAVFEYMDCGSLSDLLKTLLKGLMYLHHEKHIIHRDLKPSNILINHWGEVKICDFGVSGIINGLCAKRDSFTGTYNYMAPERISGQEHDYMSDIWSLGLVMLECATGCFFTFYAVFVIQTHPFLSLYSDMDIDLASYFKITGSPFDTFSSSKIKSGEFSRQNNKSEIKSQLTSKPTLQSSQGITDNFPSEQDFEHGAFKGPYVGFSDFGQSEMKGESSTQNKAGNKSQYPITIPKNPTLDSLKVITDNFSSKREIGRGAFGVVYKGVLENGEVIAVKKLERTSGIHARRFQNEANNLLELEHKNVVKLIGSCCQAERQVVEHDGKYVFTDVVEKLLCYEYLPNGSLDNYIYDELNGIDWPTRFKIILGICNGLHFLHKERNEAIIHMNLKPSNILLGDNMVPKIADFGLSRLFGQEQTPTYHPKCCRMDIVTGLKNDSTSQEVSSRILIDNVRRKWLKSSQITSRYPSLEEDDILQAKRCIESGLNCVETDPKKRPTISEIIVKLTDKGTVIGDEAIIHEEMEKRQKFVSTLTRNPKLQFLEDITNNFSHEREIGRGSFGVVYKGVLPNGELVAVKKLLDSVTAVNQDKQFQSEAGILIDLNHKNIVKLIGYCYEIRKEVVENNRKFFFVETPKKLLCYEYLPTGSLDKYIYGESNELKWDMRFKIIEGICQGLKFLHELKRPIIHLDLKPGNVLLDDNMMPKIADFGLSRLLGEEQTRTRTLTVVGSIGYIAPEYRYSGEISTKSDIFSLGVLIIEIVTGLKVNSSSQDVTSKGFIENVRNNWAKMPQIASNYPLLEANCLQEVKSCLARVTVTDGGSS |
||||||||||
| Function | Mitogen-activated protein kinase kinase 2 [UniProtKB/Swiss-Prot:Q9S7U9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0007990 | OsKeNa_11g0007990.02 | Chr11 | 6802803 | 6815344 | + | NAM | ||
| CDS seq | atggatggtccggcgagcttctccctagaattaccttccctcagagctctctcacttcgtgtccagacagctcctgagggaaagatcatcttcagtgagggagcactaccagttctcagacctggagcaatgcccaatcttcagagactcaagctaggcttcaatactgaacaggagaattatgtcaatatgcttgctggaattgagtacctttcaaacctccagcatattgctgcacgaattgggccaaatgccagtgttgatgaatttgataggagggctgtggattcagcattcaagaaagctatcaccaagcacccaaggtgtcctagcttcaatgtacaatgggtggcttcgagtaaggaagagtggcatccttcagagaaacagcagcagagtcaagaaaaaggctcatcatctggagaatatgtgactatcaaaacaggatcagcagaagatactgataagaacgttcttaCcgggcatagaatctttcctcaaccatcaggtaaggcgcattcaagcacgcaacataaagggtcattagctggacaagattggactatagagaaagaatcagtacaagatatgacgaaggaatcttttacagtgctccatcaaacctctaggacgacaaatcatatggagccattggatcataatcagttgagtttagatgacctagaggtaatcaaagtgatcggaaaaggtagtagtggagtggtgcacttggttcgtgacggacagactggccatttttttgttctaaaggagagcatacgcaaacagattgcccaggagttgaaaattagcttgtcaacacagtgccagtatgttgttgcatgttatcagtgtttttatgccaacggtattatttcagctgttttcgagtacatggactgcgggtctctctcagatttactgaagacactcttaaaaggactgatgtacttgcatcatgagaagcatatcatacaccgagatctaaagccatcaaatatactaataaatcactggggagaagtaaaaatatgcgattttggtgttagtggcatcattaatggtctgtgtgcaaaacgagattcatttactggaacatataactacatggcgccagaaagaatcagtgggcaggaacatgattatatgagtgatatctggagcttgggccttgttatgctggaatgtgccacgggctgcttcttcaccttctacgctgtctttgttattcagactcacccattcctgagcttgtatagcgacatggacatagatcttgcttcatacttcaaaatcactggatctccgtttgacaccttcagttcaagtaagataaaaagtggtgaattcagcagacaaaataacaagtcagagataaagtcacagctcacaagcaaaccaacattacagtcatcgcaaggcatcacagataacttcccaagtgaacaagattttgagcatggtgcatttaaagggccttatgtgggcttctccgattttgggcaatcagaaatgaagggtgaatccagcacacaaaataaggcggggaacaagtcacagtatccaattactattccaaagaatccaaccttagattctttgaaagtcatcacagataatttctcaagtaaacgagaaatcgggcgcggtgcatttggagtGGtttataagggtgttcttgagaatggggaggtgattgctgtgaagaagctcgagagaacatcaggaattcatgccagacggtttcagaacgaggcaaacaacctcctggagttggagcacaagaatgtagtgaagttgattggttcttgctgccaagcagaaaggcaagtagttgagcatgatgggaagtatgttttcacagatgtggtggagaagttactctgctatgagtatctaccgaatggaagccttgataactatatctacgatgaattgaatggaattgattggcccacgcgtttcaaaataatcttgggtatttgcaacggtttacattttctacacaaggagcggaatgaagctattattcacatgaatcttaaaccaagcaatatattattgggtgacaatatggtgccaaaaattgctgattttgggctgtcaaggctctttggtcaagagcaaaCccCGACTTATCACCCAAAATGTTGTCGGATGGATATAGTCACAGGATTGAAAAACGACTCTACCTCTCAAGAAGTTTCATCCAGGATTCTTATTGACAATGTACGGAGGAAATGGTTAAAATCATCACAAATAACGTCAAGGTACCCATCACTAGAAGAAGATGACATCCTACAGGCAAAAAGATGCATCGAAAGTGGGTTAAACTGTGTGGAGACCGATCCAAAGaaacgacctactataagtgaaattattgtaaaactcacagataaaggaacagttattggtgatgaagcgatcatacatgaagaaatggagaaaaggcaaaaattcgtaagtacgctaacaagaaacccgaagttacagtttttggaagatataacaaacaatttctcccatgagcgagaaattggtagaggttcttttggggtggtttacaagggtgtgcttccaaatggggaactagttgctgtaaagaagcttctagacagtgtgactgcagttaatcaagacaaacagtttcagagtgaggctggtattcttattgatctcaatcacaagaatatagtaaagttgattgggtattgttatgaaatacggaaggaagttgtggagaacaaccgaaaatttttctttgtggaaacaccaaaaaagttactctgctacgagtatttgcctacagggagtcttgacaagtatatttatggtgaatccaatgaattaaaatgggacatgcgcttcaaaattattgaagggatatgtcagggtttaaagttcttacatgagttgaaaagacccattattcatctagatctgaaacctggcaatgtattgttggatgataatatgatgccaaaaattgcagattttggcctatcaaggctcttaggcgaagaacaaacacgaactcgtactttaacagttgtcggatccataggatacattgccccggagtatcgttacagcggtgaaatctcaaccaaatcagacatattcagcttgggtgttttgataatcgagatagtgactgggttaaaagtcaattcgagtagccaagatgttacttcAaagggcttcattgaaaatgtacgtaataactgggcgaaaatgccacagatagcttccaactatccattattggaggcaaactgcctccaagaagtaaaaagctgcttggcaagggtcacagtgaccgacggtggtagctcttga
More
|
|||||||
| Protein seq | MDGPASFSLELPSLRALSLRVQTAPEGKIIFSEGALPVLRPGAMPNLQRLKLGFNTEQENYVNMLAGIEYLSNLQHIAARIGPNASVDEFDRRAVDSAFKKAITKHPRCPSFNVQWVASSKEEWHPSEKQQQSQEKGSSSGEYVTIKTGSAEDTDKNVLTGHRIFPQPSGKAHSSTQHKGSLAGQDWTIEKESVQDMTKESFTVLHQTSRTTNHMEPLDHNQLSLDDLEVIKVIGKGSSGVVHLVRDGQTGHFFVLKESIRKQIAQELKISLSTQCQYVVACYQCFYANGIISAVFEYMDCGSLSDLLKTLLKGLMYLHHEKHIIHRDLKPSNILINHWGEVKICDFGVSGIINGLCAKRDSFTGTYNYMAPERISGQEHDYMSDIWSLGLVMLECATGCFFTFYAVFVIQTHPFLSLYSDMDIDLASYFKITGSPFDTFSSSKIKSGEFSRQNNKSEIKSQLTSKPTLQSSQGITDNFPSEQDFEHGAFKGPYVGFSDFGQSEMKGESSTQNKAGNKSQYPITIPKNPTLDSLKVITDNFSSKREIGRGAFGVVYKGVLENGEVIAVKKLERTSGIHARRFQNEANNLLELEHKNVVKLIGSCCQAERQVVEHDGKYVFTDVVEKLLCYEYLPNGSLDNYIYDELNGIDWPTRFKIILGICNGLHFLHKERNEAIIHMNLKPSNILLGDNMVPKIADFGLSRLFGQEQTPTYHPKCCRMDIVTGLKNDSTSQEVSSRILIDNVRRKWLKSSQITSRYPSLEEDDILQAKRCIESGLNCVETDPKKRPTISEIIVKLTDKGTVIGDEAIIHEEMEKRQKFVSTLTRNPKLQFLEDITNNFSHEREIGRGSFGVVYKGVLPNGELVAVKKLLDSVTAVNQDKQFQSEAGILIDLNHKNIVKLIGYCYEIRKEVVENNRKFFFVETPKKLLCYEYLPTGSLDKYIYGESNELKWDMRFKIIEGICQGLKFLHELKRPIIHLDLKPGNVLLDDNMMPKIADFGLSRLLGEEQTRTRTLTVVGSIGYIAPEYRYSGEISTKSDIFSLGVLIIEIVTGLKVNSSSQDVTSKGFIENVRNNWAKMPQIASNYPLLEANCLQEVKSCLARVTVTDGGSS
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0007990 | OsKeNa_11g0007990.01 | Chr11 | 6802803 | 6815344 | + | NAM | ||
| CDS seq | atggatggtccggcgagcttctccctagaattaccttccctcagagctctctcacttcgtgtccagacagctcctgagggaaagatcatcttcagtgagggagcactaccagttctcagacctggagcaatgcccaatcttcagagactcaagctaggcttcaatactgaacaggagaattatgtcaatatgcttgctggaattgagtacctttcaaacctccagcatattgctgcacgaattgggccaaatgccagtgttgatgaatttgataggagggctgtggattcagcattcaagaaagctatcaccaagcacccaaggtgtcctagcttcaatgtacaatgggtggcttcgagtaaggaagagtggcatccttcagagaaacagcagcagagtcaagaaaaaggctcatcatctggagaatatgtgactatcaaaacaggatcagcagaagatactgataagaacgttcttaCcgggcatagaatctttcctcaaccatcaggtaaggcgcattcaagcacgcaacataaagggtcattagctggacaagattggactatagagaaagaatcagtacaagatatgacgaaggaatcttttacagtgctccatcaaacctctaggacgacaaatcatatggagccattggatcataatcagttgagtttagatgacctagaggtaatcaaagtgatcggaaaaggtagtagtggagtggtgcacttggttcgtgacggacagactggccatttttttgttctaaaggagagcatacgcaaacagattgcccaggagttgaaaattagcttgtcaacacagtgccagtatgttgttgcatgttatcagtgtttttatgccaacggtattatttcagctgttttcgagtacatggactgcgggtctctctcagatttactgaagacactcttaaaaggactgatgtacttgcatcatgagaagcatatcatacaccgagatctaaagccatcaaatatactaataaatcactggggagaagtaaaaatatgcgattttggtgttagtggcatcattaatggtctgtgtgcaaaacgagattcatttactggaacatataactacatggcgccagaaagaatcagtgggcaggaacatgattatatgagtgatatctggagcttgggccttgttatgctggaatgtgccacgggctgcttcttcaccttctacgctgtctttgttattcagactcacccattcctgagcttgtatagcgacatggacatagatcttgcttcatacttcaaaatcactggatctccgtttgacaccttcagttcaagtaagataaaaagtggtgaattcagcagacaaaataacaagtcagagataaagtcacagctcacaagcaaaccaacattacagtcatcgcaaggcatcacagataacttcccaagtgaacaagattttgagcatggtgcatttaaagggccttatgtgggcttctccgattttgggcaatcagaaatgaagggtgaatccagcacacaaaataaggcggggaacaagtcacagtatccaattactattccaaagaatccaaccttagattctttgaaagtcatcacagataatttctcaagtaaacgagaaatcgggcgcggtgcatttggagtGGtttataagggtgttcttgagaatggggaggtgattgctgtgaagaagctcgagagaacatcaggaattcatgccagacggtttcagaacgaggcaaacaacctcctggagttggagcacaagaatgtagtgaagttgattggttcttgctgccaagcagaaaggcaagtagttgagcatgatgggaagtatgttttcacagatgtggtggagaagttactctgctatgagtatctaccgaatggaagccttgataactatatctacgatgaattgaatggaattgattggcccacgcgtttcaaaataatcttgggtatttgcaacggtttacattttctacacaaggagcggaatgaagctattattcacatgaatcttaaaccaagcaatatattattgggtgacaatatggtgccaaaaattgctgattttgggctgtcaaggctctttggtcaagagcaaaCccCGACTTATCACCCAAAATGTTGTCGGATGGATATAGTCACAGGATTGAAAAACGACTCTACCTCTCAAGAAGTTTCATCCAGGATTCTTATTGACAATGTACGGAGGAAATGGTTAAAATCATCACAAATAACGTCAAGGTACCCATCACTAGAAGAAGATGACATCCTACAGGCAAAAAGATGCATCGAAAGTGGGTTAAACTGTGTGGAGACCGATCCAAAGaaacgacctactataagtgaaattattgtaaaactcacagataaaggaacagaagttaagcagggtgtgcttccaaatggggaactagttgctgtaaagaagcttctagacagtgtgactgcagttaatcaagacaaacagtttcagagtgaggctggtattcttattgatctcaatcacaagaatatagtaaagttgattgggtattgttatgaaatacggaaggaagttgtggagaacaaccgaaaatttttctttgtggaaacaccaaaaaagttactctgctacgagtatttgcctacagggagtcttgacaagtatatttatggtgaatccaatgaattaaaatgggacatgcgcttcaaaattattgaagggatatgtcagggtttaaagttcttacatgagttgaaaagacccattattcatctagatctgaaacctggcaatgtattgttggatgataatatgatgccaaaaattgcagattttggcctatcaaggctcttaggcgaagaacaaacacgaactcgtactttaacagttgtcggatccataggatacattgccccggagtatcgttacagcggtgaaatctcaaccaaatcagacatattcagcttgggtgttttgataatcgagatagtgactgggttaaaagtcaattcgagtagccaagatgttacttcAaagggcttcattgaaaatgtacgtaataactgggcgaaaatgccacagatagcttccaactatccattattggaggcaaactgcctccaagaagtaaaaagctgcttggcaagggtcacagtgaccgacggtggtagctcttga
More
|
|||||||
| Protein seq | MDGPASFSLELPSLRALSLRVQTAPEGKIIFSEGALPVLRPGAMPNLQRLKLGFNTEQENYVNMLAGIEYLSNLQHIAARIGPNASVDEFDRRAVDSAFKKAITKHPRCPSFNVQWVASSKEEWHPSEKQQQSQEKGSSSGEYVTIKTGSAEDTDKNVLTGHRIFPQPSGKAHSSTQHKGSLAGQDWTIEKESVQDMTKESFTVLHQTSRTTNHMEPLDHNQLSLDDLEVIKVIGKGSSGVVHLVRDGQTGHFFVLKESIRKQIAQELKISLSTQCQYVVACYQCFYANGIISAVFEYMDCGSLSDLLKTLLKGLMYLHHEKHIIHRDLKPSNILINHWGEVKICDFGVSGIINGLCAKRDSFTGTYNYMAPERISGQEHDYMSDIWSLGLVMLECATGCFFTFYAVFVIQTHPFLSLYSDMDIDLASYFKITGSPFDTFSSSKIKSGEFSRQNNKSEIKSQLTSKPTLQSSQGITDNFPSEQDFEHGAFKGPYVGFSDFGQSEMKGESSTQNKAGNKSQYPITIPKNPTLDSLKVITDNFSSKREIGRGAFGVVYKGVLENGEVIAVKKLERTSGIHARRFQNEANNLLELEHKNVVKLIGSCCQAERQVVEHDGKYVFTDVVEKLLCYEYLPNGSLDNYIYDELNGIDWPTRFKIILGICNGLHFLHKERNEAIIHMNLKPSNILLGDNMVPKIADFGLSRLFGQEQTPTYHPKCCRMDIVTGLKNDSTSQEVSSRILIDNVRRKWLKSSQITSRYPSLEEDDILQAKRCIESGLNCVETDPKKRPTISEIIVKLTDKGTEVKQGVLPNGELVAVKKLLDSVTAVNQDKQFQSEAGILIDLNHKNIVKLIGYCYEIRKEVVENNRKFFFVETPKKLLCYEYLPTGSLDKYIYGESNELKWDMRFKIIEGICQGLKFLHELKRPIIHLDLKPGNVLLDDNMMPKIADFGLSRLLGEEQTRTRTLTVVGSIGYIAPEYRYSGEISTKSDIFSLGVLIIEIVTGLKVNSSSQDVTSKGFIENVRNNWAKMPQIASNYPLLEANCLQEVKSCLARVTVTDGGSS
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0007990 | OsKeNa_11g0007990.03 | Chr11 | 6811495 | 6815550 | + | IsoSeq | ||
| CDS seq | atgaaatacggaaggaagttgtggagaacaaccgaaaatttttctttgtggaaacaccaaaaaagttactctgctacgagtatttgcctacagggagtcttgacaagtatatttatggtgaatccaatg |
|||||||
| Protein seq | MKYGRKLWRTTENFSLWKHQKSYSATSICLQGVLTSIFMVNPM |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr11 | 6812729 | 6812926 | + | OsKeNa_11g0007990.03 | OsKeNa_11g0007990.02,OsKeNa_11g0007990.03,OsKeNa_11g0007990.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.460925 | 4.499553 | 2.513865 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0226201 | RBH | 2.580138 | 3.715029 | 3.361219 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11890 | RBH | 1.362046 | 1.787075 | 0.428338 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0226201 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007980 | RBH | 0.488314 | 18.531998 | 5.753318 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007960 | RBH | 0.532639 | 3.377359 | 1.454461 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007860 | RBH | 1.258987 | 7.152298 | 7.234213 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007730 | SBH | 0.000000 | 0.169502 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007750 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0104600 | SBH | 0.0890015 | 3.093514 | 0.0141505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007740 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0110800 | SBH | 0.0472365 | 1.384266 | 0.0075685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007910 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007870 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007810 | SBH | 0.000000 | 10.839262 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007840 | SBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007870 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007950 | RBH | 0.246316 | 0.822114 | 1.681411 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007760 | RBH | 0.436219 | 25.846172 | 2.030954 |
