Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_11g0007910 | OGI:11019610 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr11:6899763-6901543 | ||||||||
| Gene Symbol | RLCK319, OsRLCK319, OsCRLK21, CRLK21, - | ||||||||||
| DNA seq | atggaaataccaacaaccgagctaccatcacaatttctgagggaaatcactgatgagttctctgatgagcgaaaagttggtgaaggtgcatttggaatagtgtataaggtaagttttttgtagttttattctcttcattttcaaaagttcatagaaaagatgtcaatttggtatgagggactcaacagggaatgcttaaagatgggacagaaattgctgtgaagaagcttcgggaaacatcaccgattcatgacaatcaatttaaaaatgaggttgggagtcttatgaaggtcaatcacagaaatatagtcaagttaattggctactgttatgaaatacaaaagaaggtggtggagcataatggaaaatatattcttacagaggcagtagaaaaactgctgtgctatgaatatatatctaatggaagccttgacaaacatcttttcggtatgataatgcaataactaaatatttccagtcattttccctgtttgcaatgtttacaagatttagatattagcatgatgtaatctactctaggttctactgaagtatacaataagtcaaaaaggtaagaagatcaagctctcactaggttgtgggctcatgaaaattccttgtattttttggcaattagtaagtaatacgattaatcctaatgttatttgttttccataattacttcttcaggtgaatcaagtcgacttgattggcacacacgcttcaatataattaagggggtttgtgagggtttgcatttcctacacaaaggatcagaaagacctattattcatttggatattaaacctggtaacatactgttggatgacaatatggtgccaaaaattgctgattttggtctatcaaggctcttgggtgaagaacaaaccagagtttgcacacaaaatgtcatgggagcaatgtaagtcaccaaacacattccaatgtcaattgttttgtagttttcctacaaggtaaatttcatttgcattagtcacataatcctcaaactattgatgctgatattatacagaggatacatggcaccggaatatttatatcgaggtgaaatctccactcaatcagatatatacagtttaggtcttctaattatcgagatcacaacaggggagaaaaacttccccaatagagaggacatcattgctaagaacttcattgagaatgtaaggcaaaaataatgactgtaccagttttataacaaatttactgttttcatactaaggagttctttcagaataatgttatatataagttcgtgtgctgtcgttgtttataggtacgccgaaattggaccaatatggtgcatatatcactgaagtacccattgttagacacaaattgcctccagcaggtaaagacatgcattgaaattggactcagctgtgttcagaccaaccggaaggacaggccttctataggggaaattgtcaatatgctcagttgaggagcaccatactcactggtagacaaggtatggctataattcaagctaaaaatgtataattgcattgacattgttctggttctaacatcctatttaaaataccagatctctccctttccaacatggtcgtcagtttgggagaggcactggagcaaccgagatgtatgagccttatcgttgatgcttcttagctacaagcaataagatcctatgaaagagattctcatctcgaaataaaatgttcttacagattccatcttgaactacattccatctccttttatacttgtaatcatgatataacaaaatattggag
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| CDS seq | atggaaataccaacaaccgagctaccatcacaatttctgagggaaatcactgatgagttctctgatgagcgaaaagttggtgaaggtgcatttggaatagtgtataagggaatgcttaaagatgggacagaaattgctgtgaagaagcttcgggaaacatcaccgattcatgacaatcaatttaaaaatgaggttgggagtcttatgaaggtcaatcacagaaatatagtcaagttaattggctactgttatgaaatacaaaagaaggtggtggagcataatggaaaatatattcttacagaggcagtagaaaaactgctgtgctatgaatatatatctaatggaagccttgacaaacatcttttcggtgaatcaagtcgacttgattggcacacacgcttcaatataattaagggggtttgtgagggtttgcatttcctacacaaaggatcagaaagacctattattcatttggatattaaacctggtaacatactgttggatgacaatatggtgccaaaaattgctgattttggtctatcaaggctcttgggtgaagaacaaaccagagtttgcacacaaaatgtcatgggagcaataggatacatggcaccggaatatttatatcgaggtgaaatctccactcaatcagatatatacagtttaggtcttctaattatcgagatcacaacaggggagaaaaacttccccaatagagaggacatcattgctaagaacttcattgagaatgtacgccgaaattggaccaatatggtgcatatatcactgaagtacccattgttagacacaaattgcctccagcaggtaaagacatgcattgaaattggactcagctgtgttcagaccaaccggaaggacaggccttctataggggaaattgtcaatatgctcagttga
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| Protein seq | MEIPTTELPSQFLREITDEFSDERKVGEGAFGIVYKGMLKDGTEIAVKKLRETSPIHDNQFKNEVGSLMKVNHRNIVKLIGYCYEIQKKVVEHNGKYILTEAVEKLLCYEYISNGSLDKHLFGESSRLDWHTRFNIIKGVCEGLHFLHKGSERPIIHLDIKPGNILLDDNMVPKIADFGLSRLLGEEQTRVCTQNVMGAIGYMAPEYLYRGEISTQSDIYSLGLLIIEITTGEKNFPNREDIIAKNFIENVRRNWTNMVHISLKYPLLDTNCLQQVKTCIEIGLSCVQTNRKDRPSIGEIVNMLS |
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| Function | Putative cysteine-rich receptor-like protein kinase 12 [UniProtKB/Swiss-Prot:O65472] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_11g0007910 | OsLima_11g0007910.01 | Chr11 | 6899763 | 6901543 | + | NAM | ||
| CDS seq | atggaaataccaacaaccgagctaccatcacaatttctgagggaaatcactgatgagttctctgatgagcgaaaagttggtgaaggtgcatttggaatagtgtataagggaatgcttaaagatgggacagaaattgctgtgaagaagcttcgggaaacatcaccgattcatgacaatcaatttaaaaatgaggttgggagtcttatgaaggtcaatcacagaaatatagtcaagttaattggctactgttatgaaatacaaaagaaggtggtggagcataatggaaaatatattcttacagaggcagtagaaaaactgctgtgctatgaatatatatctaatggaagccttgacaaacatcttttcggtgaatcaagtcgacttgattggcacacacgcttcaatataattaagggggtttgtgagggtttgcatttcctacacaaaggatcagaaagacctattattcatttggatattaaacctggtaacatactgttggatgacaatatggtgccaaaaattgctgattttggtctatcaaggctcttgggtgaagaacaaaccagagtttgcacacaaaatgtcatgggagcaataggatacatggcaccggaatatttatatcgaggtgaaatctccactcaatcagatatatacagtttaggtcttctaattatcgagatcacaacaggggagaaaaacttccccaatagagaggacatcattgctaagaacttcattgagaatgtacgccgaaattggaccaatatggtgcatatatcactgaagtacccattgttagacacaaattgcctccagcaggtaaagacatgcattgaaattggactcagctgtgttcagaccaaccggaaggacaggccttctataggggaaattgtcaatatgctcagttga
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| Protein seq | MEIPTTELPSQFLREITDEFSDERKVGEGAFGIVYKGMLKDGTEIAVKKLRETSPIHDNQFKNEVGSLMKVNHRNIVKLIGYCYEIQKKVVEHNGKYILTEAVEKLLCYEYISNGSLDKHLFGESSRLDWHTRFNIIKGVCEGLHFLHKGSERPIIHLDIKPGNILLDDNMVPKIADFGLSRLLGEEQTRVCTQNVMGAIGYMAPEYLYRGEISTQSDIYSLGLLIIEITTGEKNFPNREDIIAKNFIENVRRNWTNMVHISLKYPLLDTNCLQQVKTCIEIGLSCVQTNRKDRPSIGEIVNMLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0225000 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11780 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0225000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007960 | SBH | 0.104950 | 31.430408 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007960 | SBH | 0.532639 | 3.377359 | 1.454461 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007830 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007730 | RBH | 0.000000 | 0.169502 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007750 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0104600 | RBH | 0.0890015 | 3.093514 | 0.0141505 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007740 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0110800 | RBH | 0.0472365 | 1.384266 | 0.0075685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_Ung0000340 | RBH | 0.000000 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007810 | RBH | 0.000000 | 10.839262 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007840 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007920 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007740 | RBH | 0.000000 | 0.000000 | 0.000000 |
