Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0225000 | OGI:11019610 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:6540629-6541618 | ||||||||
| Gene Symbol | RLCK319, OsRLCK319, OsCRLK21, CRLK21, RLCK323, OsRLCK323, RLCK350, OsRLCK350 | ||||||||||
| DNA seq | TCAGAAAGACCTATTATTCATTTGGATATTAAACCTAGCAACATACTATTGGATGACAACATGGTGCCAAAAATTGCAGATTTTGGTCTATCAAGGCTCTTGGGTGAAGAACAAACCAGAGTTTGCACACAAAATGTCATGGGAGCAATGTAAGTCACCAAACACATTCCAATGTCTATTGTTTTGTAGTTTTCCTACAAGGTGAATTTCATTTGCATTAGTCACATAATCCTCCAACTATTGATGCTGATATTATACAGAGGATACATGGCACCGGAATATTTATATCGAGGTGAAATCTCCACTCAATCAGATATATACAGTTTAGGTCTTCTAATTATCGAGATCACAACAGGGGAGAAAAACTTCCCCAATAGAGAGGACATCATTGCTAAGAACTTCATTGAGAATGTAAGGCAAAAATAATGACTGTACCAGTTTTAGAACAAATTTACTGTTTTCATACTAAGGAGTTCTTTTAGAATAATGTTATATATAAGTTTGTGTGCTGTCGTTGTTTATAGGTACGCCGAAATCGGACCAATATTGTGCATATATCACTGAAGTACCCATCGTTAGACACAAATTGCCTCCAGCAGGTAAAGACATGCATTGAAATTGGACTGAGCTGTGTTCAGACCAACCGGAAGGACAGGCCTTCTATAGGGGAAATTGTCAATATGCTCAGTTGAGGAGCACCATACTCCCTTGTAGACAAGGTATGGCTATAATTCAAGCTAAAAATGTATAATTGCATTGACATTGTTCTGGTTCTAACATCCTATTTAAAATACCAGATCTCTCCCTTTCCAACATGGTCGTCAGTTTGGGAGAGGCACTGGAGCAACCGAGATGTATGAGCCTTATCATTTATGCTTCTTAGCTACAAGAAATAAGATCCTATGAAAGAGATTCTCATCTCGAAATAAATGTTCTTACAGATTCCATCTCCTTTTGTACTTGTAATCATGATATAACAAAATATTGGAG
More
|
||||||||||
| CDS seq | TCAGAAAGACCTATTATTCATTTGGATATTAAACCTAGCAACATACTATTGGATGACAACATGGTGCCAAAAATTGCAGATTTTGGTCTATCAAGGCTCTTGGGTGAAGAACAAACCAGAGTTTGCACACAAAATGTCATGGGAGCAATAGGATACATGGCACCGGAATATTTATATCGAGGTGAAATCTCCACTCAATCAGATATATACAGTTTAGGTCTTCTAATTATCGAGATCACAACAGGGGAGAAAAACTTCCCCAATAGAGAGGACATCATTGCTAAGAACTTCATTGAGAATGTACGCCGAAATCGGACCAATATTGTGCATATATCACTGAAGTACCCATCGTTAGACACAAATTGCCTCCAGCAGGTAAAGACATGCATTGAAATTGGACTGAGCTGTGTTCAGACCAACCGGAAGGACAGGCCTTCTATAGGGGAAATTGTCAATATGCTCAGTTGA
More
|
||||||||||
| Protein seq | SERPIIHLDIKPSNILLDDNMVPKIADFGLSRLLGEEQTRVCTQNVMGAIGYMAPEYLYRGEISTQSDIYSLGLLIIEITTGEKNFPNREDIIAKNFIENVRRNRTNIVHISLKYPSLDTNCLQQVKTCIEIGLSCVQTNRKDRPSIGEIVNMLS |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 14 [UniProtKB/Swiss-Prot:Q8H199] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0225000 | Os11t0225000-01 | Chr11 | 6540629 | 6541618 | + | irgsp1_rep | ||
| CDS seq | TCAGAAAGACCTATTATTCATTTGGATATTAAACCTAGCAACATACTATTGGATGACAACATGGTGCCAAAAATTGCAGATTTTGGTCTATCAAGGCTCTTGGGTGAAGAACAAACCAGAGTTTGCACACAAAATGTCATGGGAGCAATAGGATACATGGCACCGGAATATTTATATCGAGGTGAAATCTCCACTCAATCAGATATATACAGTTTAGGTCTTCTAATTATCGAGATCACAACAGGGGAGAAAAACTTCCCCAATAGAGAGGACATCATTGCTAAGAACTTCATTGAGAATGTACGCCGAAATCGGACCAATATTGTGCATATATCACTGAAGTACCCATCGTTAGACACAAATTGCCTCCAGCAGGTAAAGACATGCATTGAAATTGGACTGAGCTGTGTTCAGACCAACCGGAAGGACAGGCCTTCTATAGGGGAAATTGTCAATATGCTCAGTTGA
More
|
|||||||
| Protein seq | SERPIIHLDIKPSNILLDDNMVPKIADFGLSRLLGEEQTRVCTQNVMGAIGYMAPEYLYRGEISTQSDIYSLGLLIIEITTGEKNFPNREDIIAKNFIENVRRNRTNIVHISLKYPSLDTNCLQQVKTCIEIGLSCVQTNRKDRPSIGEIVNMLS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0225000 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11780 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0212300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0007960 | RBH | 0.104950 | 31.430408 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0007960 | RBH | 0.532639 | 3.377359 | 1.454461 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007860 | SBH | 1.258987 | 7.152298 | 7.234213 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007760 | SBH | 0.017890 | 0.096668 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007780 | SBH | 0.842782 | 5.113670 | 4.456535 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0104900 | SBH | 1.964468 | 13.716224 | 3.485632 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007770 | SBH | 0.215911 | 0.316869 | 0.362888 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0111200 | SBH | 2.6869155 | 9.1269025 | 5.7032185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007940 | SBH | 0.000000 | 0.031701 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0007840 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007840 | SBH | 12.327313 | 24.078001 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007840 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007870 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G007920 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007760 | SBH | 0.436219 | 25.846172 | 2.030954 |
