Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os06g0255700 | OGI:06022410 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr06:8097302-8104472 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAAAGAAATCTCCCGTCTCGTTCTCGTTCTCGTTCTCCTCCGCTCCTTGCGCCGCCGCCGAGACGAGGGGAGGGCCGGGCGGCGATCTCCATCTGGCGAGCAGAGCAGCGGAGGGGAGGGGATCCTGGTGCGTCCTCTTTCTGATTCATCTCTCTCTCTCTCCCACCCCACCGGGACTGGAATTTGCTTGCGTTCGTGAACCCTACTAGCTTCTCTTCTAGATCTTCTCCTCCTCCTTACCCTAATTTGATAGCCTTAAACCTCTCTTAATTCAAGTAATAACAGTTTGTTTGTTCACCCAAAAGTTTGGGGGTTCAACTGAACCCCCATGTTCCAAGTTGGATCCGCCCCTGGTTCGGGCTTTTCTCGGTGATAATCTGGATGGTAATGTTGGCTCGCGTCCGTTGGTCGAAATCTCCTGTGATATTTTTTTTTGGATCGTGATATCATGCATTAAGCACCTGTACATGTACACCTCGATTTGAGTAGAACAAGGTCTGTATTGTGCCTTGAAATGGTCGGGAAGAGTGATTTCCTAGCCTTGCTCCTCGGAAACAAACTATTTATGACATTTGAGGGCTTTTCCTATGAGGAAGGAGAAGTGCTTGTTCTACTCCTACCTCATTTGTTTGTTTGCTTGCTTGTCTGTTTGTTTGAGTGAACTAGGTTCTGGATTGGAGCTTTTTTGCTTTGCTTTGGAGCCTGCGAAATGTTTCTAAAACGCTGACTGCAGAGGATCTCAATCCAGCGGTTGGGGGGGGGGGATTGAGAGTTATGTCGTGATTTGAGATTCTCATGGCGTACAATGGAGGTGTTTGTTGAGAGAAAATTACCATTCTACCATTATCGAAACGAAGATTCGCTAAAATACCACTCCGCATTTGGGATTCGCCATAATGCCGCTCTCAAGTGTGGGGCTTCGCCTAAATGCCATTAACTTCCATTTTTTAGAACTAAAAATTGTTTCGCCCCTTCTCTCCTATGTTTAATGACCAAAATACCCCCGATTTAATCCATCAAAATTCCCCATTCTTCTTTCCTACTCGAGCAAGAGCAGTGGCCACCTGGGAGTTAACTTCCATTTTTGAGAACTAAAAACTGTTGAGTCCCTTCTCTCCTATGTTTAATGACCAAAATACCTCCGATTGAATCCATCCAAATTCCCCATTCTTCTCTCCTACTCGAGTAGGAGCAGCAGCCTGGGAGCTAGAGTTGGCCCCGTGCCACCTTGCCGTTGCCACCCCTCTTCTCGCGGGCGCCCCCGACCCCCCATCCCTACGCGCCGCCGCCGCTCCTCCTCTTCTCACTCTGCCGCCGTGCCACCGCTCCTCTTCTCGTGCCACCCTGTTGCTAGCCCACCTCTCCACTGCCGCGGTCCCTCCCCTCTTGTCGCTTGTCAACTGTTCCCACGCGCTCTTCCTAGATGTGTGAGCTCCCACTTAATTGGATTCAATCAGGGGTATTTTGGACAGTAAACATAGGAGGGGAAAGGACAAAACAATTTTTAATTCTCAAAAATGGAAGTTAATGGCATTTCGGTGAAGCCCCACACTTGAGTGGCATTGTGGTGAATCCCAAATGTGGAGTGGTATTTTAGCGAATCACCGTTTTGATGATGGTAGAATGGCAATTTTCTAGTTTGTTGATGGCACTTTGGGAAGTGGGCGTTTGCAGATGGTGCATATAAAGAAGAGTATATTTCACAAAACTCTTTTAGTTTATTATGCCAAACCATGGTGATTTATGATTAATGACATCTATATACTCTAAACTATTCAACCCTGCGAATTTCAATTAATACTAATTTTCTCGTCATGTTGAGCCACATTATCCTGAACCATTATGGTTATTGGATAGTTGTTCTCTGTCTGATATTTGCAACCAGATCAGACCAGCTGCTCCATTCACATATCGAGCTCTTATGTGGTACTTGCCTTATGTGCTTGTTATGCTGTTTCAGTATTGTTCGCTATTATATTATAGAACATCCTAAATAACATTATGTTCTAAACTTAAGAGTTGTGCATTAAGCTGACCATTATTCTTGACATTTGCACAGTTTCAATGTTTTGCAGACTTAGGGGCTATTCAAGCATCATTTGGTTTCCTTCCCAACCAAAACCTGTTCTTTCATGGACCTAATCTGTTGTTTTCTCTTATTCTAACTTGATACCCCAAACCACAGCCAACATCTCCTCTGATTTAATCAATCTGCTGTCTTTGTAGCAATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGCCAATGCCAATGTGTTTATGCCTGGGGGTCCAAATGATATCTCATTTCCTGCATCAAATAGGGATCATGATTGGGGATATGGCGGTGTTGGCAAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATGAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATCCTTTGGTAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAGAAGGACAGCTCAGCAATAATAGTTCTTGATTCCGATGATGAGGACGGATATACGGAAGGATGTGAACAGCTCACATCTGAGAACAATAAACAACAGGCACCATCTGGACTCACTAGTCCTTACACGACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATTATGGTCAAAATGCACCGTTAATAAATCAGTTCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAAAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGTATGTATCTTTCACTTGAAATTTTTCAATGGACTATCCACTTCTACATATTGGTACTTTTACTCCTTTACATACCTGCACTGACAAACCAATTTTTTGCGTCATGTCTTGTGATTGTATTTTGATAAATCTGAAGAGCATTATGATATTTCTTGTCTGGAATGTTAGAATGGAAATGTTTGATGTTTGCTGAATCTATACTCTTTTGAAGCTTAAATATCTCATATTTGAACTTTAACTCTTGTTGCTCACTGTAGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTCTCCTTACTCTTCCTACTCTTCCTAATGAGAGAAAACGAAGGAAAACAGAACCCACCACCCTGGTAGATGTTGATGGTGGAACTAACCTAGGAAAAAGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAAACTTGGATTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGGTACAAGTTGTAATCACAGATGTTTTTTTTTTACTTTTATTCTGCAGCATTATAAAATTGTTGGTTCTTTTTCCATCTGACTGCTAATTGTACTCGTAAATACATGCTATAATCTTTATTTTTTGTTTCAAGATTGAATACCGCTGTGCACAAAGTAAGTTTCATGGCAAAGTGTATTTTATAAGATAAGGTAGAGTTTGAAAAGGCGTTCATTTGTCAAATCATTTAAATATGTGTATTATGACAAAGTTTTGAAGCATTTCAATTGATTATTTCTATCTGATGTGTGTCTTTTTCCAATAATGCTCAAGTAATATTCTTTGTCCAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAATGAGATGGATGACGACTGCAATCATGACATTCGAATTCATGAAGATCTAGGCCACGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGTGCGTACCATGTTTAGGACATGTGATACTTCAAAGTTCTCAAAACTATGATGTCTATGATTCTAGTTTTACTTTGAGGAAATTATAAGCAGACAACCAACTTTGGGAATTGTTTTTTCATAAAGAAACTGCAAGTTAATTATTTACATGAAACCCCTCATGTCTCATACAGCGTCAACTTTTAAAGCCCCAAGCGTTAGATCTGGTTATACTTGACACTACACACCAGCTGTATCCACTTTGCTGTGTTCATGTCAAAAATCATTTTCCTCACTTCCTACACAACTGCTATTAATATTAAGGCACATAGCACCTTGAAGGTCTTTAGGCAGTGGAAGGGCATCACGATCAAGAGAAATTTGTGGATTCATGCTGAATGAAATAAAAATTACTGACATATAGTTCTCACACATACCGTTTTTGTAATGCTTGTTAGATTTACTGTGAATCTCTAGGGATTCTGGTTTCTTTTATAGAAAAACATGCTATGGGGGACCTTTTCTTTACTGAAATACTTCCTAAAATGGGAGAGTGTTTTCATTACCAACTCTTTTGATATTGATACCACTTTGGAGTATGTAGTAATAGTCGTTTTGGAAATCATATGGATTTCTTTAGTGGCTTGTACATGAGCTAAGCTGGGAGCCTGGGCAGTATTCAGAGCATGAGTCATGTAGTAAAGATGGAATGCTTGCATCAGTTTTCTAAAGTTTGTTGGATTTTCATACGTGGATAAGAAAATTTAACTTCATGCTTACATTATATCAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGAGATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTGGGAGACAAACCTGGAGGTTGCATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTTGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACCACTATATGATTTCTATTCTGTTAAGGCTGACAAAAGAGTAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCAGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGTCGGGACAGGCTGCTTATGGTACCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAACCACGTTTCGGAAGTGTTTAACATCTTGGACCTTGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATTGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTGGAAGACACCCTGCTGAACGATGACAACTTCACTAGAAAAGCCCATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTAGATTTTAGTGTGTTTTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAGAAGTTCAAAAGAAGTGCAGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGAGCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCTCGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCATTCAAGAAAGAAGTTATCCCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTGATATTGATGACTCTGAAGATGAACTTTTGGAGGCTAATGCTATCCGCCAGGATATCAAGGCTTTGTATAGAAGGTCAGCTATCTCTTTCTCCCGGTGCGCATGTGCAAGTTAAACCCTGGAGGTGCTATCTCTGTCTTATCCAAAATTGTCTTGTAGGTAACAAGTTATATGTGGCTGCTGTACACCATGTACATAATGCAATGCTGATCTTTCTGGCTGATCATCGCTGTGAAGTAAGGGGATTTCTCGTGAATCATTCTTCACATTACAAAATCTTTGCCCCTTATTCTGTTCTGATTGTATGACCATCAGCTTTTTCGTTAACCTTCATCATTTTTCTTCCTACAGGATGTTACAGTAGCCCCTTCTAATGCCGGAGTTCCGTTCATGCTAGGATTTATCGTTAACCTCGGTCGTTTCCCTACCTATTTGAACCACTGTCCGCTTTGTTAACATGTGCCAGCTTGGCGCAGCGGTTCGCCAGCTGATCCTAGTCTTATTTTTCTTACTGAAGATCTCCAGGACTAATAACTATGGTTTCTGCCGTTCCCGCTTGCGGCAACAACTGAAATAATGCCACTGTTTCCTTACCTGTCTTTTGTGCACTTCAATTGGTCTTCAAATTTGCCCGTTTTGCTAGGGTAAAGATAGTTTATTTCTGCGCATAACGGAATGCAGGTTATCCATCGTGCATTTGTGCATCTCTTTTATCTCCTTTGTTGCTGTACCTGGTTTTTGTGTCGACCATTCTAGTTTCAATTCTGGCTCCCATGAAAGATGCTTTAAGACTCGCAATGCCAGGATGCATACTTTTTTTTTTAATGC
More
|
||||||||||
| CDS seq | ATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGCCAATGCCAATGTGTTTATGCCTGGGGGTCCAAATGATATCTCATTTCCTGCATCAAATAGGGATCATGATTGGGGATATGGCGGTGTTGGCAAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATGAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATCCTTTGGTAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAGAAGGACAGCTCAGCAATAATAGTTCTTGATTCCGATGATGAGGACGGATATACGGAAGGATGTGAACAGCTCACATCTGAGAACAATAAACAACAGGCACCATCTGGACTCACTAGTCCTTACACGACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATTATGGTCAAAATGCACCGTTAATAAATCAGTTCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAAAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTCTCCTTACTCTTCCTACTCTTCCTAATGAGAGAAAACGAAGGAAAACAGAACCCACCACCCTGGTAGATGTTGATGGTGGAACTAACCTAGGAAAAAGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAAACTTGGATTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAATGAGATGGATGACGACTGCAATCATGACATTCGAATTCATGAAGATCTAGGCCACGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGAGATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTGGGAGACAAACCTGGAGGTTGCATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTTGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACCACTATATGATTTCTATTCTGTTAAGGCTGACAAAAGAGTAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCAGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGTCGGGACAGGCTGCTTATGGTACCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAACCACGTTTCGGAAGTGTTTAACATCTTGGACCTTGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATTGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTGGAAGACACCCTGCTGAACGATGACAACTTCACTAGAAAAGCCCATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTAGATTTTAGTGTGTTTTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAGAAGTTCAAAAGAAGTGCAGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGAGCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCTCGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCATTCAAGAAAGAAGTTATCCCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTGATATTGATGACTCTGAAGATGAACTTTTGGAGGCTAATGCTATCCGCCAGGATATCAAGGCTTTGTATAGAAGGTAA
More
|
||||||||||
| Protein seq | MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR |
||||||||||
| Function | Protein CHROMATIN REMODELING 35 [UniProtKB/Swiss-Prot:Q9SIW2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0255700 | Os06t0255700-01 | Chr06 | 8097302 | 8104472 | + | irgsp1_rep | ||
| CDS seq | ATGTATTACCGCAGGCAAAGGAAGGCTTCTTCTGAGGCCAATGCCAATGTGTTTATGCCTGGGGGTCCAAATGATATCTCATTTCCTGCATCAAATAGGGATCATGATTGGGGATATGGCGGTGTTGGCAAAGAATGGGAAGCTAGTTATGCTCGCAAACTCCAGTTGATGAATTTTCTTTCTTCACTGCATCAACGCACTGCAAATCCTTTGGTAACCACTAGAATGGATGCTAACATGGACACTCCTTTGGAGCAAAAACAGAAGGACAGCTCAGCAATAATAGTTCTTGATTCCGATGATGAGGACGGATATACGGAAGGATGTGAACAGCTCACATCTGAGAACAATAAACAACAGGCACCATCTGGACTCACTAGTCCTTACACGACATGGATTGTATCCAGTGCGAAAGACCAAGTAAATGGAACCTTGCATGTTGATGGAGTCCAAAGCACTCAAATTGTTCCATATTATGGTCAAAATGCACCGTTAATAAATCAGTTCCCTTTGCAAACCAGCTGGCAACCATCTATCCAATATGAAAGGGTTATATTGCAGAAAAGACCTGAGGAGCAACGCGTTCAAGATCTGGTGGCAGCAAGCCATGCAGAGAAGATAGCAGAAACACAAGTTCTCCTTACTCTTCCTACTCTTCCTAATGAGAGAAAACGAAGGAAAACAGAACCCACCACCCTGGTAGATGTTGATGGTGGAACTAACCTAGGAAAAAGAAAAAGGAAAAATCATCAAAATCAAGCAGCAGTTGATTCAAACTTGGATTTGCAACAAAATGATGTTCCTTCACAAAGCTACAGGACTATGATAGAAGAGGAGAAACCTGTAAAAGAAAGTGATGGTCTCGAGGATCTTTGGAAAGATTTTTCATTGGCTGCTGAATGTACAAAGCTTGATACAAATGAAGACATGTCCAATGAAAAAGATGTGGATGATGAAAATGAGATGGATGACGACTGCAATCATGACATTCGAATTCATGAAGATCTAGGCCACGTATGCCGTATTTGTGGCATGATTGTTAGAAAGGCTGAAACAATAATTGATTATCAGTGGAAAAAGGCTTCAAGGACAAGAACAAATTACTATGAATCACGTTCAAAGGATGCTGATGAGATTGATACTGGTGCTGTTAAAGTTTCCGAAGATTTCATTGTCTCTGATATTGCCATTCATCCAAGACATGCGAAGCAAATGAGACCACATCAGTTGGAAGGATTCAGCTTCCTGGTCAAGAATCTAGTGGGAGACAAACCTGGAGGTTGCATTCTAGCTCATGCTCCTGGTTCAGGGAAGACATTTATGCTCATAAGTTTCATTCAAAGCTTCTTAGCAAAGTATCCTTCTGCAAGGCCCCTTGTAGTGCTTCCGAAAGGGATTTTAGGTACTTGGAAGAGGGAGTTTCAGCGGTGGCAAGTGGAGGACATACCACTATATGATTTCTATTCTGTTAAGGCTGACAAAAGAGTAGAGCAACTGGAAGTCCTCAAATCTTGGGAAGCCCAGATGAGCATACTATTTCTTGGATACAAGCAGTTCTCACGAATCATCTGTGGTGATGGAGATGGAAACATTGCAGCTGCGTGTCGGGACAGGCTGCTTATGGTACCCAACCTACTTATACTAGACGAGGGTCATACACCAAGAAATCGGGAGACAGATGTACTGGCATCACTAAAAAGAGTCCAAACACCACGCAAAGTGGTCCTGTCTGGTACACTTTTCCAGAACCACGTTTCGGAAGTGTTTAACATCTTGGACCTTGTGCGCCCTAAGTTTCTCAAGATGGAATCATCCCGTCCTATTGCTAGACGTATAATGAGTCAGGTAGCAATATCAGGTATCAGGAGTTTAAAAGGGGTTCATGACAGTGCATTCACTGAGTCAGTGGAAGACACCCTGCTGAACGATGACAACTTCACTAGAAAAGCCCATGTTATTAGAAGTCTTAGAGAATTAACAAAAGATGTGCTTCACTATTACAAGGGTGATATCTTAGATGAACTACCTGGCCTAGTAGATTTTAGTGTGTTTTTGAAACTCAGTACCAAGCAGAAAGAAATTGTTCACAAGATAGAAGCCTATGAGAAGTTCAAAAGAAGTGCAGTGGGGACTGCATTGTACATTCATCCCTGCCTGTCAGAAATTTCAGAGGGTGATGCTGCAGATAGGGCGAGCAACTTGACAGATGCCACTGTTGACAGCTTGATTGAGTCTATCATCATTAAAGATGGGGTGAAAGCCAAGTTTTTCTTTAACATTCTGTCTCTTGCTAACTCTGCAGGAGAGAAGTTGCTTGCCTTCAGTCAATATATACTTCCCATGAAATTTTTGGAAAGGTTGTTGGTTAAGAGGCTGGGCTGGCATGTAGGGAAGGAGATTTTCATGATATCTGGTGATACTAGTGCAGACGACAGAGAAGTGGCGATGGATCAGTTTAACAACTCTGCCGATGCAAAAGTTTTGTTTGGTTCCATCAAGGCCTGTGGAGAGGGAATCTCCCTTGTTGGTGCATCTCGAGTCATCATTCTAGATGTTCATTTGAACCCATCTGTCACCCGTCAAGCAATTGGACGTGCATTCAGGCCCGGACAGCAGAAGAAAGTGTTTGTGTACAGGCTTGTTGCTGCTGATTCTCCAGAGGTGAAGTTCCATGAAACTGCATTCAAGAAAGAAGTTATCCCAAAGCTATGGTTTGAATGGAGTGAGCTCTGCACTACTGAAGACTTCAAACTGAATCAAGTTGATATTGATGACTCTGAAGATGAACTTTTGGAGGCTAATGCTATCCGCCAGGATATCAAGGCTTTGTATAGAAGGTAA
More
|
|||||||
| Protein seq | MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDTPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRSKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0255700 | RBH | 2.199889 | 2.515908 | 8.140976 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g14440 | RBH | 1.504406 | 1.484943 | 1.946629 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0434500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0010310 | RBH | 1.238326 | 13.953145 | 13.746957 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0010190 | RBH | 0.697651 | 4.740771 | 6.747262 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0010170 | RBH | 3.014949 | 13.954208 | 19.415068 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0010190 | RBH | 0.427459 | 0.499684 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0010270 | RBH | 15.242639 | 25.750856 | 33.703011 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0071500 | SBH | 23.1936675 | 64.8882635 | 67.2832315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0009840 | RBH | 0.606964 | 1.159387 | 3.262524 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0136500 | RBH | 10.0864975 | 29.5580225 | 37.193827 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0010270 | RBH | 1.102630 | 0.805935 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0010120 | RBH | 2.309575 | 11.195897 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0010150 | RBH | 10.933414 | 42.723179 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0010310 | RBH | 1.797325 | 1.786313 | 3.545211 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0010050 | RBH | 1.235928 | 8.531486 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G009970 | RBH | 1.249208 | 6.943070 | 6.643622 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0010270 | RBH | 2.383858 | 35.345684 | 13.697474 |
