Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_06g0010270 OGI:06022410 | 16/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr06:8281518-8288675
Gene Symbol -
DNA seq

gtctcgttctcgttctcgttctcctccgctccttgcgccgccgccgagacgaggggagggccgggcggcgatctccatctggcgagcagagcagcggaggggaggggatcctggtgcgtcctctttctgattcatctctctctctcccaccccaccgggactggaatttgcttgcgttcgtgaaccctactagcttctcttctagatcttctcctcctccttaccctaatttgatagccttaaacctctcttaattcaagtaataacagtttgtttgttcacccaaaagtttGggggGTTCAACTGAACCCCCATGTTCCAAGTTGGATCCGCCCCTGGTTCGGGCTTTTCTCGGTGATAATCTGGATGGTAATGTTGGCTCGCGTCCGTTGGTCGAAATCTCCTGTGATATTTTTTTTTGGATCGTGATATCATGCATTAAGCACCTGTACATGTACACCTCGATTTGAGTAGAACAAGGTCTGTATTGTGCTTGGAAATGGTCGGGAAGAGTGATTTCCTAGCCTTGCTCCTCGGAAACAAACTATTTATGACATTTGAGGGCTTTTCCTATGAGGAAGGAGGAGTGCTTGTTCTACTCCTACCTCATTTGTTTGTTTGCTTGCTTGTCTGTTTGTTTGAGTGAACTAGGTTCTGGATTGGAGCTTTTTTGCTTTGCTTTGGAGCCTGCGAAATGTTTCTAAAACGCTGACTGCAGAGGATCTCAATCCAGCGGTTGGGGGGGGGGGGATTGAGAGTTATGTCGTGATTTGAGATTCTCATGGCGTACAATGGAGGTGTTTGTTGAGAGAAAATTACCATTCTACCATTATCGAAACGAAGATTCGCTAAAATACTACTCCGCATTTGGGATTCGCCATAATGCCGCTCTCAAGTGTGGGGCTTCGCCTAAATGCCATTAACTTCCATTTTTTAGAACTAAAAATTGTTTTGCCCCTTCTCTCCTATGTTTAATGACCAAAATACCccccgatttaatccatcaaaattccccattcttctttcctactcgagcaggagcagtggccgcctgggagttaacttccatttttgagaactaaaaactgttgagtcccttctctcctatgtttaatgaccaaaatacctccgattgaatccatccaaattccccattcttctctcctactcgagtaggagcagcagcctgggagctagagttggccccgtgccaccttgccgtttccactcctcttctcgcgggcgcccctgaccccccatccctacgcgccgccgccgctcctcctcttctcactctgccgccgtgccaccgctcctcttctcgtgccaccctgttgctagcccacctctccactgccgcggtccctcccctcttgtcgcttgtcaactgttcccacgcgctcttcctagatgtgtgagctcccacttaattggattcaatcaggggtattttggacagtaaacataggaggggaaaggacaaaacaatttttaattctcaaaaatggaagttaatggcatttcggtgaagccccacacttgagtggcattgtggtgaatcccaaatgtggagtggtattttagcgaatccccgttttgatgatggtagaatggcaattttctagtttgttgatggcactttgggaagtgggcgtttgcagatggtgcatataaagaagagtatatttcacaaaactcttttagtttattatgccaaaccatggtgatttatgattaatgacatctatatactctaaactattcaaccctgcgaatttcaattaatactaattttctcgtcatgttgagccacattatcctgaaccattatggttattggatagttgttctctgtctgatatttgcaaccagatcagaccagctgctccattcacatatcgagctcttatgtggtacttgccttatgtgcttgttatgctgtttcagtattgttcgctattatattatagaacatcctaaataacattatgttctaaacttaagagttgtgcattaagctgaccattattcttgacatttgcacagtttcaatgttttgcagacttaggggctattcaagcatcatttggtttccttcccaaccaaaacctgttctttcatggacctaatctgttgttttctcttattctaacttgataccccaaaccacagccaacatctcctctgatttaatcaatctgctgtctttgtagcaatgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggtatgtatctttcacttgaaatttttcaatggactatccacttctacatattggtacttttactcctttacatacctgcactgacaaaccaattttttgcgtcatgtcttgtgattgtattttgataaatctgaagagcattatgatatttcttgtctggaatgttagaatggaaatgtttgatgtttgctgaatctatactcttttgaagcttaaatatctcatatttgaactttaactcttgttgctcactgtaggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaaggtacaagttgtaatcacagatgtttttttttttacttttattctgcagcattataaaattgttggttctttttccatctgactgctaattgtactcgtaaatacatgctataatctttattttttgtttcaagattgaataccgctgtgcacaaagtaagtttcatggcaaagtgtattttataagataaggtagagtttgaaaaggcgttcatttgtcaaatcatttaaatatgtgtattatgacaaagttttgaagcatttcaattgattatttctatctgatgtgtgtctttttccaataatgctcaagtaatattctttgtccagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggtgcgtaccatgtttaggacatgtgatacttcaaagttctcaaaactatgatgtctatgattctagttttactttgaggaaattataagcagacaaccaactttgggaattgttttttcataaagaaactgcaagttaattatttacatgaaacccctcatgtctcatacagcgtcaacttttaaagccccaagcgttagatctggttatacttgacactacacaccagctgtatccactttgctgtgttcatgtcaaaaatcattttcctcacttcctacacaactgctattaatattaaggcacatagcaccttgaaggtctttaggcagtggaagggcatcacgatcaagagaaatttgtggattcatgctgaatgaaataaaaattactgacatatagttctcacacatacggtttttgtaatgcttgttagatttactgtgaatctctaggaattctggtttcttttatagaaaaacatgctatgggggaccttttctttactgaaatacttcctaaaatgggagagtgttttcattaccaactcttttgatattgataccactttggagtatgtagtaatagtcgttttggaaatcatatggatttctttagtggcttgtacatgagctaagctgggagcctgggcagtattcagagcatgagtcatgtagtaaagatggaatgcttgcatcagttttctaaagtttgttggattttcatacgtggataagaaaatttaacttcatgcttacattatatcaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtcagctatctctttctcccggtgcgcatgtgcaagttaaaccctggaggtgctatctctgtcttatccaaaattgtcttgtaggtaacaagttatatgtggctgctgtacaccatgtacataatgcaatgctgatctttctggctgatcatcgctgtgaagtaaggggatttctcgtgaatcattcttcacattacaaaatctttgccccttattctgttctgattgtatgaccatcagctttttcgttaaccttcatcatttttcttcctacaggatgttacagtagccccttctaatgccggagttccgttcatgctaggatttatcgttaacctcggtcgtttccctacctatttgaaccactgtccgctttgttaacatgtgccagcttggcgcagcggttcgccagctgatcctagtcttatttttcttactgaagatctccaggactaataactatggtttctgccgttcccgcttgcagcaacaactgaaataatgccactgtttccttacctgtcttttgtgcacttcaattggtcttcaaatttgcccgttttgctagggtaaagatagtttatttctgcgcataacggaatgcaggttatccatcgtgcatttgtgcatctcttttatctcctttgttgcagtacctggtttttgtgtcgaccattctagtttcaattctggctcccatgaaagatgctttaagactcgcaatgccaggatgcatactttttttttaatgc

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CDS seq

atggacctaatctcaatgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtaa

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Protein seq

MDLISMYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDIPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRLKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR

Function Protein CHROMATIN REMODELING 35 [UniProtKB/Swiss-Prot:Q9SIW2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0010270 OsNaBo_06g0010270.01 Chr06 8281518 8288675 + NAM
CDS seq

atgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtaa

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Protein seq

MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDIPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRLKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0010270 OsNaBo_06g0010270.02 Chr06 8281529 8288675 + NAM
CDS seq

atgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtaa

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Protein seq

MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDIPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRLKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0010270 OsNaBo_06g0010270.04 Chr06 8281568 8288675 + NAM
CDS seq

atggacctaatctcaatgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtaa

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Protein seq

MDLISMYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDIPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRLKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR

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Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0010270 OsNaBo_06g0010270.03 Chr06 8281536 8288675 + NAM
CDS seq

atgtattaccgcaggcaaaggaaggcttcttctgaggccaatgccaatgtgtttatgcctgggggtccaaatgatatctcatttcctgcatcaaatagggatcatgattggggatatggcggtgttggcaaagaatgggaagctagttatgctcgcaaactccagttgatgaattttctttcttcactgcatcaacgcactgcaaatcctttggtaaccactagaatggatgctaacatggacattcctttggagcaaaaacagaaggacagctcagcaataatagttcttgattccgatgatgaggatggatatacggaaggatgtgaacagctcacatctgagaacaataaacaacaggcaccatctggactcactagtccttacacgacatggattgtatccagtgcgaaagaccaagtaaatggaaccttgcatgttgatggagtccaaagcactcaaattgttccatattatggtcaaaatgcaccgttaataaatcagttccctttgcaaaccagctggcaaccatctatccaatatgaaagggttatattgcagaaaagacctgaggagcaacgcgttcaagatctggtggcagcaagccatgcagagaagatagcagaaacacaagttctccttactcttcctactcttcctaatgagagaaaacgaaggaaaacagaacccaccaccctggtagatgttgatggtggaactaacctaggaaaaagaaaaaggaaaaatcatcaaaatcaagcagcagttgattcaaacttggatttgcaacaaaatgatgttccttcacaaagctacaggactatgatagaagaggagaaacctgtaaaagaaagtgatggtctcgaggatctttggaaagatttttcattggctgctgaatgtacaaagcttgatacaaatgaagacatgtccaatgaaaaagatgtggatgatgaaaatgagatggatgacgactgcaatcatgacattcgaattcatgaagatctaggccacgtatgccgtatttgtggcatgattgttagaaaggctgaaacaataattgattatcagtggaaaaaggcttcaaggacaagaacaaattactatgaatcacgtttaaaggatgctgatgagattgatactggtgctgttaaagtttccgaagatttcattgtctctgatattgccattcatccaagacatgcgaagcaaatgagaccacatcagttggaaggattcagcttcctggtcaagaatctagtgggagacaaacctggaggttgcattctagctcatgctcctggttcagggaagacatttatgctcataagtttcattcaaagcttcttagcaaagtatccttctgcaaggccccttgtagtgcttccgaaagggattttaggtacttggaagagggagtttcagcggtggcaagtggaggacataccactatatgatttctattctgttaaggctgacaaaagagtagagcaactggaagtcctcaaatcttgggaagcccagatgagcatactatttcttggatacaagcagttctcacgaatcatctgtggtgatggagatggaaacattgcagctgcgtgtcgggacaggctgcttatggtacccaacctacttatactagacgagggtcatacaccaagaaatcgggagacagatgtactggcatcactaaaaagagttcaaacaccacgcaaagtggtcctgtctggtacacttttccagaaccacgtttcggaagtgtttaacatcttggaccttgtgcgccctaagtttctcaagatggaatcatcccgtcctattgctagacgtataatgagtcaggtagcaatatcaggtatcaggagtttaaaaggggttcatgacagtgcattcactgagtcagtggaagacaccctgctgaacgatgacaacttcactagaaaagcccatgttattagaagtcttagagaattaacaaaagatgtgcttcactattacaagggtgatatcttagatgaactacctggcctagtggattttagtgtgtttttgaaactcagtaccaagcagaaagaaattgttcacaagatagaagcctatgagaagttcaaaagaagtgcagtggggactgcattgtacattcatccctgcctgtcagaaatttcagagggtgatgctgcagatagggcgagcaacttgacagatgccactgttgacagcttgattgagtctatcatcattaaagatggggtgaaagccaagtttttctttaacattctgtctcttgctaactctgcaggagagaagttgcttgccttcagtcaatatatacttcccatgaaatttttggaaaggttgttggttaagaggctgggctggcatgtagggaaggagattttcatgatatctggtgatactagtgcagacgacagagaagtggcgatggatcagtttaacaactctgccgatgcaaaagttttgtttggttccatcaaggcctgtggagagggaatctcccttgttggtgcatctcgagtcatcattctagatgttcatttgaacccatctgtcacccgtcaagcaattggacgtgcattcaggcccggacagcagaagaaagtgtttgtgtacaggcttgttgctgctgattctccagaggtgaagttccatgaaactgcattcaagaaagaagttatcccaaagctatggtttgaatggagtgagctctgcactactgaagacttcaaactgaatcaagttgatattgatgactctgaagatgaacttttggaggctaatgctatccgccaggatatcaaggctttgtatagaaggtaa

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Protein seq

MYYRRQRKASSEANANVFMPGGPNDISFPASNRDHDWGYGGVGKEWEASYARKLQLMNFLSSLHQRTANPLVTTRMDANMDIPLEQKQKDSSAIIVLDSDDEDGYTEGCEQLTSENNKQQAPSGLTSPYTTWIVSSAKDQVNGTLHVDGVQSTQIVPYYGQNAPLINQFPLQTSWQPSIQYERVILQKRPEEQRVQDLVAASHAEKIAETQVLLTLPTLPNERKRRKTEPTTLVDVDGGTNLGKRKRKNHQNQAAVDSNLDLQQNDVPSQSYRTMIEEEKPVKESDGLEDLWKDFSLAAECTKLDTNEDMSNEKDVDDENEMDDDCNHDIRIHEDLGHVCRICGMIVRKAETIIDYQWKKASRTRTNYYESRLKDADEIDTGAVKVSEDFIVSDIAIHPRHAKQMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPSARPLVVLPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSRIICGDGDGNIAAACRDRLLMVPNLLILDEGHTPRNRETDVLASLKRVQTPRKVVLSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESVEDTLLNDDNFTRKAHVIRSLRELTKDVLHYYKGDILDELPGLVDFSVFLKLSTKQKEIVHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESIIIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELCTTEDFKLNQVDIDDSEDELLEANAIRQDIKALYRR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr06 8281630 8283731 + OsNaBo_06g0010270.02 OsNaBo_06g0010270.02,OsNaBo_06g0010270.01 All
A3 Chr06 8281630 8283580 + OsNaBo_06g0010270.02 OsNaBo_06g0010270.04,OsNaBo_06g0010270.03,OsNaBo_06g0010270.02 All
A3 Chr06 8281630 8283731 + OsNaBo_06g0010270.03 OsNaBo_06g0010270.03,OsNaBo_06g0010270.01 All
RI Chr06 8283580 8284329 + OsNaBo_06g0010270.03 OsNaBo_06g0010270.04,OsNaBo_06g0010270.03 All
SE Chr06 8281630 8283731 + OsNaBo_06g0010270.04 OsNaBo_06g0010270.04,OsNaBo_06g0010270.01 All

Expression

Leaf Root Panicle
FPKM 2.383858 35.345684 13.697474

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0255700 RBH 2.199889 2.515908 8.140976
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g14440 RBH 1.504406 1.484943 1.946629
Nipponbare | IRGSP 1.0 | RAP-db Os06g0255700 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0010310 RBH 1.238326 13.953145 13.746957
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0010190 RBH 0.697651 4.740771 6.747262
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0010170 RBH 3.014949 13.954208 19.415068
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0010190 RBH 0.427459 0.499684 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0010270 RBH 15.242639 25.750856 33.703011
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0071500 SBH 23.1936675 64.8882635 67.2832315
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0009840 RBH 0.606964 1.159387 3.262524
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0136500 RBH 10.0864975 29.5580225 37.193827
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0010270 RBH 1.102630 0.805935 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0010120 RBH 2.309575 11.195897 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0010150 RBH 10.933414 42.723179 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0010310 RBH 1.797325 1.786313 3.545211
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0010050 RBH 1.235928 8.531486 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G009970 RBH 1.249208 6.943070 6.643622
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0012030 RBH 0.766757 12.412567 13.725542
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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