Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
Os04g0457800		OGI:04069740 \| 16/16			Nipponbare \| IRGSP 1.0 \| RAP-db			Chr04:22867357-22872511		Homologues MicroCollinearity RGI-JBrowse RAP-DB Ricevarmap2
Gene Symbol		OsSERK2, OsBiSERK1, OsSERK1, OsSerk2, OsBAK1-2, SERK2
DNA seq		GACCAAAAAAGATTGCCTAGGATGTTTAGCACCGTCAAAAGAGAGAGTTGTACGTACAATACAGCAGAGAGAGAGGCATCAGTTGTTCAGCCATTACAGACGCAGAGCCGCCACAACAATGTGTTGCAATTCCGCCCGGCCATGCATTTCTAACGACAACCAAGTGCAGAGCCTACTTGAAAATTACCGAGGCACCAGGGAGGGTTACAAGTAAACCATTTTTCCCTCCAGATTTGCCAGCTATCGATCTGTCTGTCATATACACAAACAAGGGCGAGGAAGCCGTCGAGCAAAGGTTGGATGCTTTGTGATTTTGTCTTTCGTTTCTTTTACCTCGGGCCGGACAGCTCCATTGCCCGGAGATTGTAGGTCGAGTCGACGATCCAGTCGTTGTGGCGGGGGGCCAGCTCCGCCTCCTGCCGGACCACCTCCACCTTCTGCCACTCCTCCCACCGCTCCGCGAGGCCATCGCCCTCCAGCATCCTCACCACCTCCGACATCTTGGGCCGGTCCATCGGGGAGCCCTGCGTGCAGAGCAGAGCCACCTGGATGAGTGACTCCACCTCATGCTCCACGAAGCCGCTCTGGAGGTCCGGGTCCACCAGCATCTCCACCTTCTTCTCTTTCAGGAGCCCTTTCACCTGAAAAGACAAAAACCAGTTTAGTTACTTGCCTGTCAGTTTCCAAATGTAGTAGTACAAAATTTTGCTAAGTCATGCGTGCAGATGGATCATGTCTCGGTATCAGAAATGGCGAAAAACTAGCTGCCAATTTGTCATGGCGTGCATCTCCATAATTGATGACACATGGAGACTGAACTGCCAGCTCGCTTTATCACTGCCAACAGTCCAATAATTTCAACCATTTGTTCTAATTCCTGGACTAGAACTGAGACACAGCTAAGAAAGATGTGTCCTGGAGGACAACTAGCATGCACAAGGAAAAACAAAACCAAAACTTCCATGGTTGCCCCAATATATAAAGATGTGGTGGTACTTACCCAATCGAGCAACATCACATCATCATCGTTTGCAAGACGAGCAAGATCAAATGCCCTTTGTCCTGTAATGAGCTCAAGAAGCATGATTCCATAGCCAAAAACATCAGTCTTCTCAGAGGACTTCCCAGTAGAGAGGTACTCAGGAGCAATGTGTCCGATCGTCCCACGAACAGCTGTGGTTACATGAGTGTCCTTGTAATCCATAAGTTTGGCCAGTCCAAAGTCACCCACGACTGCCTCAAAATCTTCATCCAACAGAATATTTGCAGCTTTGACATCACGATGAATGATCTTGGGATCACAATGGTCGTGCAAGTAGGACAATCCTCTGGCAGATCCCAGCGCAATCCGAGTTCTTGTTTGCCATTCAAGCGGCGGATCATTTGGCTGCCGCTCTACAAAATCATATACCACGACTCAAAAACTGAAATAATTAATTTATGGGCGTGCATTTTTAGATGAAGGAATATATTTATTCCGGACTCTGCAGAAGGCATGCACTCAACCATTCATTATTACAGTCTTAGTCATAACCTTAAATGAACAATGTGATATGTCAACTGAAACAACTAGGTATATGCTGTGAGTAGATGAAATTAAAAAGAGTGCTTAAGTGATTTCAATAACCATAATAGCTGTGCCATTTATGTTTAAGCATGCAAACAAACGTGTAAGAAACTATTAATGGATTTACTCTAAGAAAAAGTAAGGAAGATTAAGGCACCTCGCAATCGTGATGCGACACTCCCATTAGCCATGTAGGGATAGACAAGTAACCGTTCTGTAGGCGTCATGCAAAATCCACGGAGCCGAAGCAGGTTCCTATGCACCGCCATGCTAATCATTTCAACTTCTGTTTGGAACTGGAGCTCACCACCAGGGGTACGTTCTTCTTTTAATCTTTTCACTGCTACCAACGAGCCATCTGCCAGTCTACCTTTGTACACCTTTCCAAAGCCACCTCTTCCCAGAATATTCTTATTGCTAAAGTTATCAGTAGCAACTTGAAGCTCCCGGAGTGAGAATCTCTTAAGTTGGCCAAGGTGCACTTCCGGATCCTCCTCAGCTGAATTTAAAGGAGAATATAGATTATTTAAATGGATAACATAAGTATCATGAACTGCAGTATGCAACTATAATACCAACCAGGGACATCAAAGAAGTGTTCTTCAGGTTTACGCCGCCGCCACCATGCAAATCCAATTGCCGGAACCGCAAACAGCAATGCAGCAGCTGCAGCAACACCTCCAGCAATTGCTCCAGTTTTGGAGTCACCTGATGGAATAGAATTAATTCCACCCGAATATGTCAAATCCCCTGTCTGCATCATTTATGCATATGCATATCCCAAGCAGTATCACAAATGTAACAGAATTAAAACTATAGAGAATCACCTTGTGACACAGTAGGTGTTGGGGGATTGAAAGGAGGTGGTGGAGAAAAAGGTGGAGCTCCAGGGCAGGGTTTTGTAGTACCCGGGCCACAAAGATCTTTATTATTAGCAAAACTGCGACAATGAAATAACCATTTGTCAGCCTCACAAGATGTAGTAAGCACTAAGAACCTAAATTCTATCTAGAAAAAGCACCTTATAGGGGTAAAGAGTGAAAAGGAGCCAGTAGACGGAACCTCTCCTGAGAGATTGTTATTTGAGAGATCCCTGCATAAATTATTGGACATTTTGTTAATATGTATCCATCTTAAAGTCTATTACCATGTAAGCAATAATTTCTACAGGTAGACACCAAATATGAATTAGCAGAAAGGGAACTTACAGAACTTGAAGAGTAGTGATATTGGTCAAGGATTTTGGAATTGAACCAGAAAGACTGTTGTTGTTAAGACGACTATCCTTACAAGAAGACATGCAAATAAAGAATTATGTTATGATCATTCAAACAGGAAGGCCTTCAATGATATACACAATTTATAATTCTATTCATAATAAAAAAAAAGTGGAGTACACTTACAGGAAACGCAGCTTGTAGAGTTGCCCCAAGGTTTCCGGAATAAAACCAGTGAAGTTGTTCAGGTAAAGATCCAAACTGACCAAGTTAGTTAAGTTTCCCAGTTCATTAGGTATTGTCCCACTTATGTTGTTGCTGTAAAGCTCCCTGTAATTAGTCACAACATAATTAAATTTCACAATAAAAATGCAAGAAAGAAGGTGGCAACACAACCATCTTTACCACAAGGATAAGCCATATTCCAAGAGTTTTGAAAACCAAGCTTCAATGCAGTATATTATGACAACTTGAATAGATACGCTACTGCATGGTGTAACTAAAAACATAATTCTCCAAAGACTGGAAGTGTAAACTTACAGATATTGCAGATTTTTCAACTGCCCAAGCTGGGGAACCAATGCACCTGACAGTTGTGCATTTCCAAGATCACTGCGAAAGGAAAATAGATCAGTCAACACACAAAATGATCACATTTCTTACTTTTGACAAGCCTAAAAATGATAATTCTGTCAAAAACTTACACTCTGATCACGCTGTTGTCAGGGTTACAAGTTACATGGAACCATGTGCATGGATTGACCAGAGTGGGATCCCAACTCTGCAGCACATTGTTAGCATCTTTCAGACTTTGGCGCAGACTATATAGGGCATCACCTGACATCGAACATACCCTCAACATCAGCAACATAGTATTTAAGGAAGTAGACAATAGTGACAGTAGCTTCTCGTCAAAATTTTGGCAAATTCAATCGCCTTTTCAGGCTAAAGTATGCAAGCATATATTGAGTACAAGAAGGTATAAGATACAGTACTTTCATTTCTTACAATACTATCTGCATAACTCCCAATCTTTCTCAAGATTAGTGTTTGAACATTAGTTAGTATCTATGCTACAGAGGTACTTGCGATTAACAAGACCTAAATGTGGAAAAGGATAGCACATAAAGTTGCTTAAAAAGACTGAAATAATTGCATAAGAAACAACTAGAAAGAACACTTATCTTAGTCATAATCACTAACTAGAACTTACAATAGCTAAGGCACCTTTTGCAATCTAGTGTCATAAACATCACAACGCCAAAATCACCAAATTTTCTTAGAACATGGTTACTACCAAGGATATATCAGGAAAAGCATGTTGAGGGGCATTTTAAAGAGGTGAAATTGGTTAGGTGATAACAAAAGATGATGACCCTTTTTCCTGTTCGGGAAAAGCTTAAACTTGATACTAACGATGGCCCTTACCTATTGAAGAGCAATCTATAACACATACTCCTACCGTAAGAAACCAATTAGCTATACTAGTCAGTAATTCAGATTTTTTTTAAAAAAAAAATCTCTTTTCACAAGAGAAGATTCACAACTCACAAGCAATATTCTTTCCATACTCGAACCTAATGAGGAAGCCAGTTCCATTTTCTTCATTCAGAGTGGCCAAAATAGCACACCAAACTCATCCCAGATATTAGCAATCCCATTTCTGTCAGGATTTATTCCATTATCTAAAAAAAAAAGCTATCCCATTTCTGTGCACATACAAATCACACCTACCAAACTTACTCAAGAAACGTTTCCTACCTCGGACAAATCTCCCTGCTGGGAGCAAATTCACAACACACCATGAGAGGCAGCAAAACAAAGAGCTATAGCCTAGATAATCCATCGAGTCTACAAAAGGAAGGTCGGTGGGCGTATGCTCCATCCCCTTAAATGAGTCAATCCATCCACGCCCATATGTACCGAGAAGCAGGTAACATGTACTAGTACCCAAACGGAATCACCCGATGACCAATAGATTCATCGAATCCGAAAGCAAGTCCAAAAATAGGGGTGGGCGTAATCCGCCGAAAAACGGAGCTGAATTCGATGAAAAATCACACTAACCCTCCGTGTTGGCGCCGACCCGGCTCACGGCCACCGCCACCACCCACACGAACGGCACCGCCAAGCACAGCCGCCGCCGCCGCAGCAGCCGCGCCTCCGCCATCCCCCGCCGCCGCTCACCGCTGCCAAGTGGACCCAACCCGGAGGCCGCCGGCGTCCCCTCGGCAAAGGGGGGGACCGCCCGATCAGCTCCCTCTCCTCGTCGCCGCCGCCGCCGGCTCGGTCTCCTCTCCTCTCCTCTCCTCTTCTCCAATGGAAGCAGGAAGCGACCTGTCTCTCCTCTCTCTCTCCTTTTTTTTTTACC More
CDS seq		ATGGCGGAGGCGCGGCTGCTGCGGCGGCGGCGGCTGTGCTTGGCGGTGCCGTTCGTGTGGGTGGTGGCGGTGGCCGTGAGCCGGGTCGGCGCCAACACGGAGGGTGATGCCCTATATAGTCTGCGCCAAAGTCTGAAAGATGCTAACAATGTGCTGCAGAGTTGGGATCCCACTCTGGTCAATCCATGCACATGGTTCCATGTAACTTGTAACCCTGACAACAGCGTGATCAGAGTTGATCTTGGAAATGCACAACTGTCAGGTGCATTGGTTCCCCAGCTTGGGCAGTTGAAAAATCTGCAATATCTGGAGCTTTACAGCAACAACATAAGTGGGACAATACCTAATGAACTGGGAAACTTAACTAACTTGGTCAGTTTGGATCTTTACCTGAACAACTTCACTGGTTTTATTCCGGAAACCTTGGGGCAACTCTACAAGCTGCGTTTCCTTCGTCTTAACAACAACAGTCTTTCTGGTTCAATTCCAAAATCCTTGACCAATATCACTACTCTTCAAGTTCTGGATCTCTCAAATAACAATCTCTCAGGAGAGGTTCCGTCTACTGGCTCCTTTTCACTCTTTACCCCTATAAGTTTTGCTAATAATAAAGATCTTTGTGGCCCGGGTACTACAAAACCCTGCCCTGGAGCTCCACCTTTTTCTCCACCACCTCCTTTCAATCCCCCAACACCTACTGTGTCACAAGGTGACTCCAAAACTGGAGCAATTGCTGGAGGTGTTGCTGCAGCTGCTGCATTGCTGTTTGCGGTTCCGGCAATTGGATTTGCATGGTGGCGGCGGCGTAAACCTGAAGAACACTTCTTTGATGTCCCTGCTGAGGAGGATCCGGAAGTGCACCTTGGCCAACTTAAGAGATTCTCACTCCGGGAGCTTCAAGTTGCTACTGATAACTTTAGCAATAAGAATATTCTGGGAAGAGGTGGCTTTGGAAAGGTGTACAAAGGTAGACTGGCAGATGGCTCGTTGGTAGCAGTGAAAAGATTAAAAGAAGAACGTACCCCTGGTGGTGAGCTCCAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTGAAAGGGCTCCTGAAAGAGAAGAAGGTGGAGATGCTGGTGGACCCGGACCTCCAGAGCGGCTTCGTGGAGCATGAGGTGGAGTCACTCATCCAGGTGGCTCTGCTCTGCACGCAGGGCTCCCCGATGGACCGGCCCAAGATGTCGGAGGTGGTGAGGATGCTGGAGGGCGATGGCCTCGCGGAGCGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTCCGGCAGGAGGCGGAGCTGGCCCCCCGCCACAACGACTGGATCGTCGACTCGACCTACAATCTCCGGGCAATGGAGCTGTCCGGCCCGAGGTAA More
Protein seq		MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNLQYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISFANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEAELAPRHNDWIVDSTYNLRAMELSGPR
Function		LRR receptor kinase SERK2 [UniProtKB/Swiss-Prot:Q7XV05]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os04g0457800	Os04t0457800-01	Chr04	22867479	22872511	-	irgsp1_rep
CDS seq	ATGGCGGAGGCGCGGCTGCTGCGGCGGCGGCGGCTGTGCTTGGCGGTGCCGTTCGTGTGGGTGGTGGCGGTGGCCGTGAGCCGGGTCGGCGCCAACACGGAGGGTGATGCCCTATATAGTCTGCGCCAAAGTCTGAAAGATGCTAACAATGTGCTGCAGAGTTGGGATCCCACTCTGGTCAATCCATGCACATGGTTCCATGTAACTTGTAACCCTGACAACAGCGTGATCAGAGTTGATCTTGGAAATGCACAACTGTCAGGTGCATTGGTTCCCCAGCTTGGGCAGTTGAAAAATCTGCAATATCTGGAGCTTTACAGCAACAACATAAGTGGGACAATACCTAATGAACTGGGAAACTTAACTAACTTGGTCAGTTTGGATCTTTACCTGAACAACTTCACTGGTTTTATTCCGGAAACCTTGGGGCAACTCTACAAGCTGCGTTTCCTTCGTCTTAACAACAACAGTCTTTCTGGTTCAATTCCAAAATCCTTGACCAATATCACTACTCTTCAAGTTCTGGATCTCTCAAATAACAATCTCTCAGGAGAGGTTCCGTCTACTGGCTCCTTTTCACTCTTTACCCCTATAAGTTTTGCTAATAATAAAGATCTTTGTGGCCCGGGTACTACAAAACCCTGCCCTGGAGCTCCACCTTTTTCTCCACCACCTCCTTTCAATCCCCCAACACCTACTGTGTCACAAGGTGACTCCAAAACTGGAGCAATTGCTGGAGGTGTTGCTGCAGCTGCTGCATTGCTGTTTGCGGTTCCGGCAATTGGATTTGCATGGTGGCGGCGGCGTAAACCTGAAGAACACTTCTTTGATGTCCCTGCTGAGGAGGATCCGGAAGTGCACCTTGGCCAACTTAAGAGATTCTCACTCCGGGAGCTTCAAGTTGCTACTGATAACTTTAGCAATAAGAATATTCTGGGAAGAGGTGGCTTTGGAAAGGTGTACAAAGGTAGACTGGCAGATGGCTCGTTGGTAGCAGTGAAAAGATTAAAAGAAGAACGTACCCCTGGTGGTGAGCTCCAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTGAAAGGGCTCCTGAAAGAGAAGAAGGTGGAGATGCTGGTGGACCCGGACCTCCAGAGCGGCTTCGTGGAGCATGAGGTGGAGTCACTCATCCAGGTGGCTCTGCTCTGCACGCAGGGCTCCCCGATGGACCGGCCCAAGATGTCGGAGGTGGTGAGGATGCTGGAGGGCGATGGCCTCGCGGAGCGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTCCGGCAGGAGGCGGAGCTGGCCCCCCGCCACAACGACTGGATCGTCGACTCGACCTACAATCTCCGGGCAATGGAGCTGTCCGGCCCGAGGTAA More
Protein seq	MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNLQYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISFANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEAELAPRHNDWIVDSTYNLRAMELSGPR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
Os04g0457800	Os04t0457800-02	Chr04	22867357	22869205	-	irgsp1_rep
CDS seq	GAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTGAAAGGGCTCCTGAAAGAGAAGAAGGTGGAGATGCTGGTGGACCCGGACCTCCAGAGCGGCTTCGTGGAGCATGAGGTGGAGTCACTCATCCAGGTGGCTCTGCTCTGCACGCAGGGCTCCCCGATGGACCGGCCCAAGATGTCGGAGGTGGTGAGGATGCTGGAGGGCGATGGCCTCGCGGAGCGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTCCGGCAGGAGGCGGAGCTGGCCCCCCGCCACAACGACTGGATCGTCGACTCGACCTACAATCTCCGGGCAATGGAGCTGTCCGGCCCGAGGTAA More
Protein seq	EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEAELAPRHNDWIVDSTYNLRAMELSGPR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	None	None	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0457800	RBH	9.310103	12.806160	10.170617
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g38480	RBH	5.131497	7.405272	2.273780
Nipponbare \| IRGSP 1.0 \| RAP-db	Os02g0549200	SBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0015720	RBH	0.414794	17.685368	9.510224
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0016460	RBH	0.567575	6.861198	2.105632
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0016190	RBH	3.646673	21.686275	7.888460
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0015920	RBH	0.525840	0.853207	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0016160	RBH	11.741917	22.834911	26.941164
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0356600	RBH	5.4914475	27.2443905	8.332405
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0014960	RBH	0.552619	2.386018	1.946765
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0355300	RBH	7.4336265	27.6290615	12.096069
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0015480	RBH	0.926235	0.429352	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0015390	RBH	1.156154	22.539864	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0015350	RBH	2.299966	36.353168	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0015890	RBH	1.614269	3.574955	2.632005
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0015980	RBH	0.663214	22.082521	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G015200	RBH	1.314978	9.649262	6.230430
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0015260	RBH	3.963027	39.110256	13.401776

Custom TreePlot

Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.