Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g38480 | OGI:04069740 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:22867268-22872511 | ||||||||
| Gene Symbol | OsSERK2, OsBiSERK1, OsSERK1, OsSerk2, OsBAK1-2, SERK2 | ||||||||||
| DNA seq | TTTTTTTCAGATAAAGAGTTGAGTTTGCTACCAGTATAGTTTTTCAACGAAGAGTAACAAAGTACAGGCGGACACGGTGTGACCCGGGAGACCAAAAAAGATTGCCTAGGATGTTTAGCACCGTCAAAAGAGAGAGTTGTACGTACAATACAGCAGAGAGAGAGGCATCAGTTGTTCAGCCATTACAGACGCAGAGCCGCCACAACAATGTGTTGCAATTCCGCCCGGCCATGCATTTCTAACGACAACCAAGTGCAGAGCCTACTTGAAAATTACCGAGGCACCAGGGAGGGTTACAAGTAAACCATTTTTCCCTCCAGATTTGCCAGCTATCGATCTGTCTGTCATATACACAAACAAGGGCGAGGAAGCCGTCGAGCAAAGGTTGGATGCTTTGTGATTTTGTCTTTCGTTTCTTTTACCTCGGGCCGGACAGCTCCATTGCCCGGAGATTGTAGGTCGAGTCGACGATCCAGTCGTTGTGGCGGGGGGCCAGCTCCGCCTCCTGCCGGACCACCTCCACCTTCTGCCACTCCTCCCACCGCTCCGCGAGGCCATCGCCCTCCAGCATCCTCACCACCTCCGACATCTTGGGCCGGTCCATCGGGGAGCCCTGCGTGCAGAGCAGAGCCACCTGGATGAGTGACTCCACCTCATGCTCCACGAAGCCGCTCTGGAGGTCCGGGTCCACCAGCATCTCCACCTTCTTCTCTTTCAGGAGCCCTTTCACCTGAAAAGACAAAAACCAGTTTAGTTACTTGCCTGTCAGTTTCCAAATGTAGTAGTACAAAATTTTGCTAAGTCATGCGTGCAGATGGATCATGTCTCGGTATCAGAAATGGCGAAAAACTAGCTGCCAATTTGTCATGGCGTGCATCTCCATAATTGATGACACATGGAGACTGAACTGCCAGCTCGCTTTATCACTGCCAACAGTCCAATAATTTCAACCATTTGTTCTAATTCCTGGACTAGAACTGAGACACAGCTAAGAAAGATGTGTCCTGGAGGACAACTAGCATGCACAAGGAAAAACAAAACCAAAACTTCCATGGTTGCCCCAATATATAAAGATGTGGTGGTACTTACCCAATCGAGCAACATCACATCATCATCGTTTGCAAGACGAGCAAGATCAAATGCCCTTTGTCCTGTAATGAGCTCAAGAAGCATGATTCCATAGCCAAAAACATCAGTCTTCTCAGAGGACTTCCCAGTAGAGAGGTACTCAGGAGCAATGTGTCCGATCGTCCCACGAACAGCTGTGGTTACATGAGTGTCCTTGTAATCCATAAGTTTGGCCAGTCCAAAGTCACCCACGACTGCCTCAAAATCTTCATCCAACAGAATATTTGCAGCTTTGACATCACGATGAATGATCTTGGGATCACAATGGTCGTGCAAGTAGGACAATCCTCTGGCAGATCCCAGCGCAATCCGAGTTCTTGTTTGCCATTCAAGCGGCGGATCATTTGGCTGCCGCTCTACAAAATCATATACCACGACTCAAAAACTGAAATAATTAATTTATGGGCGTGCATTTTTAGATGAAGGAATATATTTATTCCGGACTCTGCAGAAGGCATGCACTCAACCATTCATTATTACAGTCTTAGTCATAACCTTAAATGAACAATGTGATATGTCAACTGAAACAACTAGGTATATGCTGTGAGTAGATGAAATTAAAAAGAGTGCTTAAGTGATTTCAATAACCATAATAGCTGTGCCATTTATGTTTAAGCATGCAAACAAACGTGTAAGAAACTATTAATGGATTTACTCTAAGAAAAAGTAAGGAAGATTAAGGCACCTCGCAATCGTGATGCGACACTCCCATTAGCCATGTAGGGATAGACAAGTAACCGTTCTGTAGGCGTCATGCAAAATCCACGGAGCCGAAGCAGGTTCCTATGCACCGCCATGCTAATCATTTCAACTTCTGTTTGGAACTGGAGCTCACCACCAGGGGTACGTTCTTCTTTTAATCTTTTCACTGCTACCAACGAGCCATCTGCCAGTCTACCTTTGTACACCTTTCCAAAGCCACCTCTTCCCAGAATATTCTTATTGCTAAAGTTATCAGTAGCAACTTGAAGCTCCCGGAGTGAGAATCTCTTAAGTTGGCCAAGGTGCACTTCCGGATCCTCCTCAGCTGAATTTAAAGGAGAATATAGATTATTTAAATGGATAACATAAGTATCATGAACTGCAGTATGCAACTATAATACCAACCAGGGACATCAAAGAAGTGTTCTTCAGGTTTACGCCGCCGCCACCATGCAAATCCAATTGCCGGAACCGCAAACAGCAATGCAGCAGCTGCAGCAACACCTCCAGCAATTGCTCCAGTTTTGGAGTCACCTGATGGAATAGAATTAATTCCACCCGAATATGTCAAATCCCCTGTCTGCATCATTTATGCATATGCATATCCCAAGCAGTATCACAAATGTAACAGAATTAAAACTATAGAGAATCACCTTGTGACACAGTAGGTGTTGGGGGATTGAAAGGAGGTGGTGGAGAAAAAGGTGGAGCTCCAGGGCAGGGTTTTGTAGTACCCGGGCCACAAAGATCTTTATTATTAGCAAAACTGCGACAATGAAATAACCATTTGTCAGCCTCACAAGATGTAGTAAGCACTAAGAACCTAAATTCTATCTAGAAAAAGCACCTTATAGGGGTAAAGAGTGAAAAGGAGCCAGTAGACGGAACCTCTCCTGAGAGATTGTTATTTGAGAGATCCCTGCATAAATTATTGGACATTTTGTTAATATGTATCCATCTTAAAGTCTATTACCATGTAAGCAATAATTTCTACAGGTAGACACCAAATATGAATTAGCAGAAAGGGAACTTACAGAACTTGAAGAGTAGTGATATTGGTCAAGGATTTTGGAATTGAACCAGAAAGACTGTTGTTGTTAAGACGACTATCCTTACAAGAAGACATGCAAATAAAGAATTATGTTATGATCATTCAAACAGGAAGGCCTTCAATGATATACACAATTTATAATTCTATTCATAATAAAAAAAAAGTGGAGTACACTTACAGGAAACGCAGCTTGTAGAGTTGCCCCAAGGTTTCCGGAATAAAACCAGTGAAGTTGTTCAGGTAAAGATCCAAACTGACCAAGTTAGTTAAGTTTCCCAGTTCATTAGGTATTGTCCCACTTATGTTGTTGCTGTAAAGCTCCCTGTAATTAGTCACAACATAATTAAATTTCACAATAAAAATGCAAGAAAGAAGGTGGCAACACAACCATCTTTACCACAAGGATAAGCCATATTCCAAGAGTTTTGAAAACCAAGCTTCAATGCAGTATATTATGACAACTTGAATAGATACGCTACTGCATGGTGTAACTAAAAACATAATTCTCCAAAGACTGGAAGTGTAAACTTACAGATATTGCAGATTTTTCAACTGCCCAAGCTGGGGAACCAATGCACCTGACAGTTGTGCATTTCCAAGATCACTGCGAAAGGAAAATAGATCAGTCAACACACAAAATGATCACATTTCTTACTTTTGACAAGCCTAAAAATGATAATTCTGTCAAAAACTTACACTCTGATCACGCTGTTGTCAGGGTTACAAGTTACATGGAACCATGTGCATGGATTGACCAGAGTGGGATCCCAACTCTGCAGCACATTGTTAGCATCTTTCAGACTTTGGCGCAGACTATATAGGGCATCACCTGACATCGAACATACCCTCAACATCAGCAACATAGTATTTAAGGAAGTAGACAATAGTGACAGTAGCTTCTCGTCAAAATTTTGGCAAATTCAATCGCCTTTTCAGGCTAAAGTATGCAAGCATATATTGAGTACAAGAAGGTATAAGATACAGTACTTTCATTTCTTACAATACTATCTGCATAACTCCCAATCTTTCTCAAGATTAGTGTTTGAACATTAGTTAGTATCTATGCTACAGAGGTACTTGCGATTAACAAGACCTAAATGTGGAAAAGGATAGCACATAAAGTTGCTTAAAAAGACTGAAATAATTGCATAAGAAACAACTAGAAAGAACACTTATCTTAGTCATAATCACTAACTAGAACTTACAATAGCTAAGGCACCTTTTGCAATCTAGTGTCATAAACATCACAACGCCAAAATCACCAAATTTTCTTAGAACATGGTTACTACCAAGGATATATCAGGAAAAGCATGTTGAGGGGCATTTTAAAGAGGTGAAATTGGTTAGGTGATAACAAAAGATGATGACCCTTTTTCCTGTTCGGGAAAAGCTTAAACTTGATACTAACGATGGCCCTTACCTATTGAAGAGCAATCTATAACACATACTCCTACCGTAAGAAACCAATTAGCTATACTAGTCAGTAATTCAGATTTTTTTTAAAAAAAAAATCTCTTTTCACAAGAGAAGATTCACAACTCACAAGCAATATTCTTTCCATACTCGAACCTAATGAGGAAGCCAGTTCCATTTTCTTCATTCAGAGTGGCCAAAATAGCACACCAAACTCATCCCAGATATTAGCAATCCCATTTCTGTCAGGATTTATTCCATTATCTAAAAAAAAAAGCTATCCCATTTCTGTGCACATACAAATCACACCTACCAAACTTACTCAAGAAACGTTTCCTACCTCGGACAAATCTCCCTGCTGGGAGCAAATTCACAACACACCATGAGAGGCAGCAAAACAAAGAGCTATAGCCTAGATAATCCATCGAGTCTACAAAAGGAAGGTCGGTGGGCGTATGCTCCATCCCCTTAAATGAGTCAATCCATCCACGCCCATATGTACCGAGAAGCAGGTAACATGTACTAGTACCCAAACGGAATCACCCGATGACCAATAGATTCATCGAATCCGAAAGCAAGTCCAAAAATAGGGGTGGGCGTAATCCGCCGAAAAACGGAGCTGAATTCGATGAAAAATCACACTAACCCTCCGTGTTGGCGCCGACCCGGCTCACGGCCACCGCCACCACCCACACGAACGGCACCGCCAAGCACAGCCGCCGCCGCCGCAGCAGCCGCGCCTCCGCCATCCCCCGCCGCCGCTCACCGCTGCCAAGTGGACCCAACCCGGAGGCCGCCGGCGTCCCCTCGGCAAAGGGGGGGACCGCCCGATCAGCTCCCTCTCCTCGTCGCCGCCGCCGCCGGCTCGGTCTCCTCTCCTCTCCTCTCCTCTTCTCCAATGGAAGCAGGAAGCGACCTGTCTCTCCTCTCTCTCTCCTTTTTTTTTTACC
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| CDS seq | ATGGCGGAGGCGCGGCTGCTGCGGCGGCGGCGGCTGTGCTTGGCGGTGCCGTTCGTGTGGGTGGTGGCGGTGGCCGTGAGCCGGGTCGGCGCCAACACGGAGGGTGATGCCCTATATAGTCTGCGCCAAAGTCTGAAAGATGCTAACAATGTGCTGCAGAGTTGGGATCCCACTCTGGTCAATCCATGCACATGGTTCCATGTAACTTGTAACCCTGACAACAGCGTGATCAGAGTTGATCTTGGAAATGCACAACTGTCAGGTGCATTGGTTCCCCAGCTTGGGCAGTTGAAAAATCTGCAATATCTGGAGCTTTACAGCAACAACATAAGTGGGACAATACCTAATGAACTGGGAAACTTAACTAACTTGGTCAGTTTGGATCTTTACCTGAACAACTTCACTGGTTTTATTCCGGAAACCTTGGGGCAACTCTACAAGCTGCGTTTCCTTCGTCTTAACAACAACAGTCTTTCTGGTTCAATTCCAAAATCCTTGACCAATATCACTACTCTTCAAGTTCTGGATCTCTCAAATAACAATCTCTCAGGAGAGGTTCCGTCTACTGGCTCCTTTTCACTCTTTACCCCTATAAGTTTTGCTAATAATAAAGATCTTTGTGGCCCGGGTACTACAAAACCCTGCCCTGGAGCTCCACCTTTTTCTCCACCACCTCCTTTCAATCCCCCAACACCTACTGTGTCACAAGGTGACTCCAAAACTGGAGCAATTGCTGGAGGTGTTGCTGCAGCTGCTGCATTGCTGTTTGCGGTTCCGGCAATTGGATTTGCATGGTGGCGGCGGCGTAAACCTGAAGAACACTTCTTTGATGTCCCTGCTGAGGAGGATCCGGAAGTGCACCTTGGCCAACTTAAGAGATTCTCACTCCGGGAGCTTCAAGTTGCTACTGATAACTTTAGCAATAAGAATATTCTGGGAAGAGGTGGCTTTGGAAAGGTGTACAAAGGTAGACTGGCAGATGGCTCGTTGGTAGCAGTGAAAAGATTAAAAGAAGAACGTACCCCTGGTGGTGAGCTCCAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTGAAAGGGCTCCTGAAAGAGAAGAAGGTGGAGATGCTGGTGGACCCGGACCTCCAGAGCGGCTTCGTGGAGCATGAGGTGGAGTCACTCATCCAGGTGGCTCTGCTCTGCACGCAGGGCTCCCCGATGGACCGGCCCAAGATGTCGGAGGTGGTGAGGATGCTGGAGGGCGATGGCCTCGCGGAGCGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTCCGGCAGGAGGCGGAGCTGGCCCCCCGCCACAACGACTGGATCGTCGACTCGACCTACAATCTCCGGGCAATGGAGCTGTCCGGCCCGAGGTAA
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| Protein seq | MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNLQYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISFANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEAELAPRHNDWIVDSTYNLRAMELSGPR |
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| Function | LRR receptor kinase SERK2 [UniProtKB/Swiss-Prot:Q7XV05] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g38480 | LOC_Os04g38480.1 | Chr04 | 22867268 | 22872511 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGAGGCGCGGCTGCTGCGGCGGCGGCGGCTGTGCTTGGCGGTGCCGTTCGTGTGGGTGGTGGCGGTGGCCGTGAGCCGGGTCGGCGCCAACACGGAGGGTGATGCCCTATATAGTCTGCGCCAAAGTCTGAAAGATGCTAACAATGTGCTGCAGAGTTGGGATCCCACTCTGGTCAATCCATGCACATGGTTCCATGTAACTTGTAACCCTGACAACAGCGTGATCAGAGTTGATCTTGGAAATGCACAACTGTCAGGTGCATTGGTTCCCCAGCTTGGGCAGTTGAAAAATCTGCAATATCTGGAGCTTTACAGCAACAACATAAGTGGGACAATACCTAATGAACTGGGAAACTTAACTAACTTGGTCAGTTTGGATCTTTACCTGAACAACTTCACTGGTTTTATTCCGGAAACCTTGGGGCAACTCTACAAGCTGCGTTTCCTTCGTCTTAACAACAACAGTCTTTCTGGTTCAATTCCAAAATCCTTGACCAATATCACTACTCTTCAAGTTCTGGATCTCTCAAATAACAATCTCTCAGGAGAGGTTCCGTCTACTGGCTCCTTTTCACTCTTTACCCCTATAAGTTTTGCTAATAATAAAGATCTTTGTGGCCCGGGTACTACAAAACCCTGCCCTGGAGCTCCACCTTTTTCTCCACCACCTCCTTTCAATCCCCCAACACCTACTGTGTCACAAGGTGACTCCAAAACTGGAGCAATTGCTGGAGGTGTTGCTGCAGCTGCTGCATTGCTGTTTGCGGTTCCGGCAATTGGATTTGCATGGTGGCGGCGGCGTAAACCTGAAGAACACTTCTTTGATGTCCCTGCTGAGGAGGATCCGGAAGTGCACCTTGGCCAACTTAAGAGATTCTCACTCCGGGAGCTTCAAGTTGCTACTGATAACTTTAGCAATAAGAATATTCTGGGAAGAGGTGGCTTTGGAAAGGTGTACAAAGGTAGACTGGCAGATGGCTCGTTGGTAGCAGTGAAAAGATTAAAAGAAGAACGTACCCCTGGTGGTGAGCTCCAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTGAAAGGGCTCCTGAAAGAGAAGAAGGTGGAGATGCTGGTGGACCCGGACCTCCAGAGCGGCTTCGTGGAGCATGAGGTGGAGTCACTCATCCAGGTGGCTCTGCTCTGCACGCAGGGCTCCCCGATGGACCGGCCCAAGATGTCGGAGGTGGTGAGGATGCTGGAGGGCGATGGCCTCGCGGAGCGGTGGGAGGAGTGGCAGAAGGTGGAGGTGGTCCGGCAGGAGGCGGAGCTGGCCCCCCGCCACAACGACTGGATCGTCGACTCGACCTACAATCTCCGGGCAATGGAGCTGTCCGGCCCGAGGTAA
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| Protein seq | MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNLQYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISFANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKVEMLVDPDLQSGFVEHEVESLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWEEWQKVEVVRQEAELAPRHNDWIVDSTYNLRAMELSGPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g38480 | LOC_Os04g38480.2 | Chr04 | 22868111 | 22872511 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGAGGCGCGGCTGCTGCGGCGGCGGCGGCTGTGCTTGGCGGTGCCGTTCGTGTGGGTGGTGGCGGTGGCCGTGAGCCGGGTCGGCGCCAACACGGAGGGTGATGCCCTATATAGTCTGCGCCAAAGTCTGAAAGATGCTAACAATGTGCTGCAGAGTTGGGATCCCACTCTGGTCAATCCATGCACATGGTTCCATGTAACTTGTAACCCTGACAACAGCGTGATCAGAGTTGATCTTGGAAATGCACAACTGTCAGGTGCATTGGTTCCCCAGCTTGGGCAGTTGAAAAATCTGCAATATCTGGAGCTTTACAGCAACAACATAAGTGGGACAATACCTAATGAACTGGGAAACTTAACTAACTTGGTCAGTTTGGATCTTTACCTGAACAACTTCACTGGTTTTATTCCGGAAACCTTGGGGCAACTCTACAAGCTGCGTTTCCTTCGTCTTAACAACAACAGTCTTTCTGGTTCAATTCCAAAATCCTTGACCAATATCACTACTCTTCAAGTTCTGGATCTCTCAAATAACAATCTCTCAGGAGAGGTTCCGTCTACTGGCTCCTTTTCACTCTTTACCCCTATAAGTTTTGCTAATAATAAAGATCTTTGTGGCCCGGGTACTACAAAACCCTGCCCTGGAGCTCCACCTTTTTCTCCACCACCTCCTTTCAATCCCCCAACACCTACTGTGTCACAAGGTGACTCCAAAACTGGAGCAATTGCTGGAGGTGTTGCTGCAGCTGCTGCATTGCTGTTTGCGGTTCCGGCAATTGGATTTGCATGGTGGCGGCGGCGTAAACCTGAAGAACACTTCTTTGATGTCCCTGCTGAGGAGGATCCGGAAGTGCACCTTGGCCAACTTAAGAGATTCTCACTCCGGGAGCTTCAAGTTGCTACTGATAACTTTAGCAATAAGAATATTCTGGGAAGAGGTGGCTTTGGAAAGGTGTACAAAGGTAGACTGGCAGATGGCTCGTTGGTAGCAGTGAAAAGATTAAAAGAAGAACGTACCCCTGGTGGTGAGCTCCAGTTCCAAACAGAAGTTGAAATGATTAGCATGGCGGTGCATAGGAACCTGCTTCGGCTCCGTGGATTTTGCATGACGCCTACAGAACGGTTACTTGTCTATCCCTACATGGCTAATGGGAGTGTCGCATCACGATTGCGAGAGCGGCAGCCAAATGATCCGCCGCTTGAATGGCAAACAAGAACTCGGATTGCGCTGGGATCTGCCAGAGGATTGTCCTACTTGCACGACCATTGTGATCCCAAGATCATTCATCGTGATGTCAAAGCTGCAAATATTCTGTTGGATGAAGATTTTGAGGCAGTCGTGGGTGACTTTGGACTGGCCAAACTTATGGATTACAAGGACACTCATGTAACCACAGCTGTTCGTGGGACGATCGGACACATTGCTCCTGAGTACCTCTCTACTGGGAAGTCCTCTGAGAAGACTGATGTTTTTGGCTATGGAATCATGCTTCTTGAGCTCATTACAGGACAAAGGGCATTTGATCTTGCTCGTCTTGCAAACGATGATGATGTGATGTTGCTCGATTGGGTAAGTACCACCACATCTTTATATATTGGGGCAACCATGGAAGTTTTGGTTTTGTTTTTCCTTGTGCATGCTAGTTGTCCTCCAGGACACATCTTTCTTAGCTGTGTCTCAGTTCTAGTCCAGGAATTAGAACAAATGGTTGAAATTATTGGACTGTTGGCAGTGATAAAGCGAGCTGGCAGTTCAGTCTCCATGTGTCATCAATTATGGAGATGCACGCCATGA
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| Protein seq | MAEARLLRRRRLCLAVPFVWVVAVAVSRVGANTEGDALYSLRQSLKDANNVLQSWDPTLVNPCTWFHVTCNPDNSVIRVDLGNAQLSGALVPQLGQLKNLQYLELYSNNISGTIPNELGNLTNLVSLDLYLNNFTGFIPETLGQLYKLRFLRLNNNSLSGSIPKSLTNITTLQVLDLSNNNLSGEVPSTGSFSLFTPISFANNKDLCGPGTTKPCPGAPPFSPPPPFNPPTPTVSQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRKPEEHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRERQPNDPPLEWQTRTRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVSTTTSLYIGATMEVLVLFFLVHASCPPGHIFLSCVSVLVQELEQMVEIIGLLAVIKRAGSSVSMCHQLWRCTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.131497 | 7.405272 | 2.273780 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0457800 | RBH | 9.310103 | 12.806160 | 10.170617 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g07760 | SBH | 0.880365 | 1.112661 | 1.967556 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0457800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0015720 | RBH | 0.414794 | 17.685368 | 9.510224 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0016460 | RBH | 0.567575 | 6.861198 | 2.105632 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0016190 | RBH | 3.646673 | 21.686275 | 7.888460 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0015920 | RBH | 0.525840 | 0.853207 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0016160 | RBH | 11.741917 | 22.834911 | 26.941164 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0356600 | RBH | 5.4914475 | 27.2443905 | 8.332405 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0014960 | RBH | 0.552619 | 2.386018 | 1.946765 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0355300 | RBH | 7.4336265 | 27.6290615 | 12.096069 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0015480 | RBH | 0.926235 | 0.429352 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0015390 | RBH | 1.156154 | 22.539864 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0015350 | RBH | 2.299966 | 36.353168 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0015890 | RBH | 1.614269 | 3.574955 | 2.632005 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0015980 | RBH | 0.663214 | 22.082521 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G015200 | RBH | 1.314978 | 9.649262 | 6.230430 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0015260 | RBH | 3.963027 | 39.110256 | 13.401776 |
