Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0186200 | OGI:02014330 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:4796037-4797937 | ||||||||
| Gene Symbol | OsEnS-28 | ||||||||||
| DNA seq | TCGCGTTCGCGTACTTACGTTGTCGTCGTCGATCATCTGATCACCATGTACGACGCCGTCGCCTGCGTCGTCGCCGTCGTCGTCGTCGTCGTCTTCGCCATGCTTTGGGTGAAGCTGGCGAGGAGTGGTGATGGTGGTGGTGGTGGTAGTGGTGGCGTGAGGCTGCCGCCTGGGCCGTGGCGGCTGCCGGTCATCGGGAGCCTGCACCACGTGGTGGGCGACCGGCTCCTCCACCGCTCCATGGCGCGCATCGCGCGCCGGCTCGGCGACGCGCCGCTCGTGTACCTGCAGCTCGGGGAGGTCCCCGTCGTGGTGGCCTCGTCGCCCGGCGCCGCGCGCGAGGTCACGCGGACGCACGACCTCGCGTTCGCCGACCGGGCGCTCAACCCGACCGCGCGGCGGCTGCGGCCCGGCGGCGCCGGGGTGGCGCTCGCGCCGTACGGCGCGCTGTGGCGTCAGCTCCGCAAGATCTGCGTCGTCGAGCTCCTCAGCGCGCGCCGCGTCCGGTCGTTCCGCCGCGTCCGGGAGGAGGAGGCCGGCCGCCTCGTGGGCGCGCTCGCCGCCGCCGCCGCGTCGCCCGGCGAGGAGGCGGCCGTCAACTTCACCGAGCGGATCGCGGAGGCCGTCTCGGACGCGGCGCTGCGCGCCATGATCGGGGACAGGTTCGAGCGGCGCGACGAGTTCTTGCAGGAGCTCACCGAGCAGATGAAGCTCCTCGGCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTGGCGAGCGCCATCGGCGGCAGGGCGCGGCGAGCGGAGGCGAACAGCAGGAAGCTCTACGAGCTCATGGACTGCGCCATCCGGCAGCACCAGCAGCAGCGGGCGGAGGCCGCCGTGGTAGACGGCGGCGCCGGCGTCGAGGACGACAAGAACCAAGACCTCATAGACGTGCTCCTGAACATACAGAAACAAGGGGAGCTCGAGACGCCTCTCACCATGGAACAAATCAAAGCTGTTATCCTTGTAAGTAAAATTGACACCTGTCGTATTAAAAGCAAAGTAAAATATATCTACTCTCTTCATCCCAGAGTAACAGGTTCAGATTAAGTGTACTATAATATATCATATCTCGTATGAGATTGATTTATTTTAGGACGGAGAGAGTATGTGCTATCATGGTGGATTATATTTGCTCAATTAGATGGTACAGCTCTCAAATCTTTGTAGTATTTTTCATTCGATCTTTTAACTTTTTATAGGATCTCTTTAGTGGAGGTAGCGAGACATCGGCGACTACGCTTCAATGGGCGATGTCGGAGCTAATAAAGAACCCAATGGTTATGCAAAAGACACAAGCCGAGCTACGTGACAAACTTAGGAGAAAGCCAACTGTGACAGAGGATGATTTGTCTGGCTTAAAGTATGTAAAGCTCATTATTAAGGAGACCCTAAGGCTTCACCCTGTGGTACCACTGCTTGTCGCAAGAGAGTGTCGTGAATCATGTAAAGTCATGGGGTATGATGTTCCAAAAGGCACCACTGTATTTGTTAACGCGTGGGCTATCGGCAGAGACCCAAAGTACTGGGATGACGCTGAGGAGTTTAGACCAGAACGGTTTGAACACAGTACTGTTGACTTCAAGGGCATAGACCTCGAGTTCATACCGTTTGGCGCAGGACGAAGAATATGTCCTGGTATGGCATTCGCAGAAGCAATCATGGAACTTCTGCTTGCTGCGCTGCTCTACCACTTTGACTGGGAACTCCCTAATGGAATGGCAGCGAGCGAGCTGGATATGACAGAGGAGATGGGCATCACCGTCCGGAGGAAGAATGACCTTCACCTCCGCCCCCATCCTCCGTGTGTTGTAAGGTCAAACTTCCGTAGTTTTGTTGAGAGAGAGAGAGAGAGGCACTTCGTGTAG
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| CDS seq | ATGTACGACGCCGTCGCCTGCGTCGTCGCCGTCGTCGTCGTCGTCGTCTTCGCCATGCTTTGGGTGAAGCTGGCGAGGAGTGGTGATGGTGGTGGTGGTGGTAGTGGTGGCGTGAGGCTGCCGCCTGGGCCGTGGCGGCTGCCGGTCATCGGGAGCCTGCACCACGTGGTGGGCGACCGGCTCCTCCACCGCTCCATGGCGCGCATCGCGCGCCGGCTCGGCGACGCGCCGCTCGTGTACCTGCAGCTCGGGGAGGTCCCCGTCGTGGTGGCCTCGTCGCCCGGCGCCGCGCGCGAGGTCACGCGGACGCACGACCTCGCGTTCGCCGACCGGGCGCTCAACCCGACCGCGCGGCGGCTGCGGCCCGGCGGCGCCGGGGTGGCGCTCGCGCCGTACGGCGCGCTGTGGCGTCAGCTCCGCAAGATCTGCGTCGTCGAGCTCCTCAGCGCGCGCCGCGTCCGGTCGTTCCGCCGCGTCCGGGAGGAGGAGGCCGGCCGCCTCGTGGGCGCGCTCGCCGCCGCCGCCGCGTCGCCCGGCGAGGAGGCGGCCGTCAACTTCACCGAGCGGATCGCGGAGGCCGTCTCGGACGCGGCGCTGCGCGCCATGATCGGGGACAGGTTCGAGCGGCGCGACGAGTTCTTGCAGGAGCTCACCGAGCAGATGAAGCTCCTCGGCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTGGCGAGCGCCATCGGCGGCAGGGCGCGGCGAGCGGAGGCGAACAGCAGGAAGCTCTACGAGCTCATGGACTGCGCCATCCGGCAGCACCAGCAGCAGCGGGCGGAGGCCGCCGTGGTAGACGGCGGCGCCGGCGTCGAGGACGACAAGAACCAAGACCTCATAGACGTGCTCCTGAACATACAGAAACAAGGGGAGCTCGAGACGCCTCTCACCATGGAACAAATCAAAGCTGTTATCCTTGATCTCTTTAGTGGAGGTAGCGAGACATCGGCGACTACGCTTCAATGGGCGATGTCGGAGCTAATAAAGAACCCAATGGTTATGCAAAAGACACAAGCCGAGCTACGTGACAAACTTAGGAGAAAGCCAACTGTGACAGAGGATGATTTGTCTGGCTTAAAGTATGTAAAGCTCATTATTAAGGAGACCCTAAGGCTTCACCCTGTGGTACCACTGCTTGTCGCAAGAGAGTGTCGTGAATCATGTAAAGTCATGGGGTATGATGTTCCAAAAGGCACCACTGTATTTGTTAACGCGTGGGCTATCGGCAGAGACCCAAAGTACTGGGATGACGCTGAGGAGTTTAGACCAGAACGGTTTGAACACAGTACTGTTGACTTCAAGGGCATAGACCTCGAGTTCATACCGTTTGGCGCAGGACGAAGAATATGTCCTGGTATGGCATTCGCAGAAGCAATCATGGAACTTCTGCTTGCTGCGCTGCTCTACCACTTTGACTGGGAACTCCCTAATGGAATGGCAGCGAGCGAGCTGGATATGACAGAGGAGATGGGCATCACCGTCCGGAGGAAGAATGACCTTCACCTCCGCCCCCATCCTCCGTGTGTTGTAAGGTCAAACTTCCGTAGTTTTGTTGAGAGAGAGAGAGAGAGGCACTTCGTGTAG
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| Protein seq | MYDAVACVVAVVVVVVFAMLWVKLARSGDGGGGGSGGVRLPPGPWRLPVIGSLHHVVGDRLLHRSMARIARRLGDAPLVYLQLGEVPVVVASSPGAAREVTRTHDLAFADRALNPTARRLRPGGAGVALAPYGALWRQLRKICVVELLSARRVRSFRRVREEEAGRLVGALAAAAASPGEEAAVNFTERIAEAVSDAALRAMIGDRFERRDEFLQELTEQMKLLGGFSLDDLFPSSWLASAIGGRARRAEANSRKLYELMDCAIRQHQQQRAEAAVVDGGAGVEDDKNQDLIDVLLNIQKQGELETPLTMEQIKAVILDLFSGGSETSATTLQWAMSELIKNPMVMQKTQAELRDKLRRKPTVTEDDLSGLKYVKLIIKETLRLHPVVPLLVARECRESCKVMGYDVPKGTTVFVNAWAIGRDPKYWDDAEEFRPERFEHSTVDFKGIDLEFIPFGAGRRICPGMAFAEAIMELLLAALLYHFDWELPNGMAASELDMTEEMGITVRRKNDLHLRPHPPCVVRSNFRSFVERERERHFV |
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| Function | Premnaspirodiene oxygenase [UniProtKB/Swiss-Prot:A6YIH8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0186200 | Os02t0186200-00 | Chr02 | 4796037 | 4797937 | + | irgsp1_rep | ||
| CDS seq | ATGTACGACGCCGTCGCCTGCGTCGTCGCCGTCGTCGTCGTCGTCGTCTTCGCCATGCTTTGGGTGAAGCTGGCGAGGAGTGGTGATGGTGGTGGTGGTGGTAGTGGTGGCGTGAGGCTGCCGCCTGGGCCGTGGCGGCTGCCGGTCATCGGGAGCCTGCACCACGTGGTGGGCGACCGGCTCCTCCACCGCTCCATGGCGCGCATCGCGCGCCGGCTCGGCGACGCGCCGCTCGTGTACCTGCAGCTCGGGGAGGTCCCCGTCGTGGTGGCCTCGTCGCCCGGCGCCGCGCGCGAGGTCACGCGGACGCACGACCTCGCGTTCGCCGACCGGGCGCTCAACCCGACCGCGCGGCGGCTGCGGCCCGGCGGCGCCGGGGTGGCGCTCGCGCCGTACGGCGCGCTGTGGCGTCAGCTCCGCAAGATCTGCGTCGTCGAGCTCCTCAGCGCGCGCCGCGTCCGGTCGTTCCGCCGCGTCCGGGAGGAGGAGGCCGGCCGCCTCGTGGGCGCGCTCGCCGCCGCCGCCGCGTCGCCCGGCGAGGAGGCGGCCGTCAACTTCACCGAGCGGATCGCGGAGGCCGTCTCGGACGCGGCGCTGCGCGCCATGATCGGGGACAGGTTCGAGCGGCGCGACGAGTTCTTGCAGGAGCTCACCGAGCAGATGAAGCTCCTCGGCGGGTTCAGCCTCGACGACCTGTTCCCGTCGTCGTGGCTGGCGAGCGCCATCGGCGGCAGGGCGCGGCGAGCGGAGGCGAACAGCAGGAAGCTCTACGAGCTCATGGACTGCGCCATCCGGCAGCACCAGCAGCAGCGGGCGGAGGCCGCCGTGGTAGACGGCGGCGCCGGCGTCGAGGACGACAAGAACCAAGACCTCATAGACGTGCTCCTGAACATACAGAAACAAGGGGAGCTCGAGACGCCTCTCACCATGGAACAAATCAAAGCTGTTATCCTTGATCTCTTTAGTGGAGGTAGCGAGACATCGGCGACTACGCTTCAATGGGCGATGTCGGAGCTAATAAAGAACCCAATGGTTATGCAAAAGACACAAGCCGAGCTACGTGACAAACTTAGGAGAAAGCCAACTGTGACAGAGGATGATTTGTCTGGCTTAAAGTATGTAAAGCTCATTATTAAGGAGACCCTAAGGCTTCACCCTGTGGTACCACTGCTTGTCGCAAGAGAGTGTCGTGAATCATGTAAAGTCATGGGGTATGATGTTCCAAAAGGCACCACTGTATTTGTTAACGCGTGGGCTATCGGCAGAGACCCAAAGTACTGGGATGACGCTGAGGAGTTTAGACCAGAACGGTTTGAACACAGTACTGTTGACTTCAAGGGCATAGACCTCGAGTTCATACCGTTTGGCGCAGGACGAAGAATATGTCCTGGTATGGCATTCGCAGAAGCAATCATGGAACTTCTGCTTGCTGCGCTGCTCTACCACTTTGACTGGGAACTCCCTAATGGAATGGCAGCGAGCGAGCTGGATATGACAGAGGAGATGGGCATCACCGTCCGGAGGAAGAATGACCTTCACCTCCGCCCCCATCCTCCGTGTGTTGTAAGGTCAAACTTCCGTAGTTTTGTTGAGAGAGAGAGAGAGAGGCACTTCGTGTAG
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| Protein seq | MYDAVACVVAVVVVVVFAMLWVKLARSGDGGGGGSGGVRLPPGPWRLPVIGSLHHVVGDRLLHRSMARIARRLGDAPLVYLQLGEVPVVVASSPGAAREVTRTHDLAFADRALNPTARRLRPGGAGVALAPYGALWRQLRKICVVELLSARRVRSFRRVREEEAGRLVGALAAAAASPGEEAAVNFTERIAEAVSDAALRAMIGDRFERRDEFLQELTEQMKLLGGFSLDDLFPSSWLASAIGGRARRAEANSRKLYELMDCAIRQHQQQRAEAAVVDGGAGVEDDKNQDLIDVLLNIQKQGELETPLTMEQIKAVILDLFSGGSETSATTLQWAMSELIKNPMVMQKTQAELRDKLRRKPTVTEDDLSGLKYVKLIIKETLRLHPVVPLLVARECRESCKVMGYDVPKGTTVFVNAWAIGRDPKYWDDAEEFRPERFEHSTVDFKGIDLEFIPFGAGRRICPGMAFAEAIMELLLAALLYHFDWELPNGMAASELDMTEEMGITVRRKNDLHLRPHPPCVVRSNFRSFVERERERHFV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0186200 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g09320 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0006500 | SBH | 0.048737 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0006650 | SBH | 0.000000 | 0.247685 | 1.030326 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0006430 | SBH | 0.0 | 0.000000 | 0.672735 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006390 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0006420 | SBH | 1.352356 | 4.581595 | 5.586592 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0081400 | SBH | 1.12522 | 11.593083 | 0.532187 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0006380 | SBH | 0.414991 | 0.050392 | 0.249546 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0084000 | SBH | 2.403291 | 3.7092115 | 0.139474 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0006790 | SBH | 0.050209 | 1.296661 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0006350 | SBH | 0.327971 | 15.745680 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0006680 | SBH | 3.315184 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0006670 | SBH | 0.388017 | 0.148740 | 0.122075 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0006400 | SBH | 0.115466 | 0.420202 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G006550 | SBH | 0.177034 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0006520 | RBH | 3.720679 | 1.206675 | 0.883913 |
