Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os01g0113500 | OGI:01002250 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:734071-737556 | ||||||||
Gene Symbol | RLCK9, OsRLCK9 | ||||||||||
DNA seq | GATGAGATACTTTAACCAGCCCCCTTGTAAATAAGCTTTTTTTTTTGGAACGAAGCTTATAAATAAGCTAGGGTTGATTATTAGATACACACACTTGCAGTATATTGATTGATTAATTGCATATGTTTCCACCTTAATTCCCTGTCCATCTCTGGCCGTTTCAGTGCACAAAGATGAGTAAAGTCATTGCAACAACACTCCTCCTCTCCGTCATCAGCCATGGCGCCTACCCGGCCATGGGTTCAGCTTGGGAGGAGGAAGACTTCGCCAGAAATTGTCCACCGTCCTGGTGCAGTGACAGTGGACCAGAGATCCGGTTCCCTCACCAGCTTGAATCCAGCAACTCATCTTCATCATCATCATGCAGTGCTTCATGCGCGAGGCTAGCATGCTCTGGTCCAGACACCATCCTGCATCACCCATTTCTGGGGCCATGCAAGGTAACTGCCATAGATTACAAGAAAGCTGTTTTCCAGATCATCCCGCTCGTAGACTCATTGTCTTCATACCCGCTTCAGAAGCTCATCATCGACAATCTACCGGAACCAGATTATCATTCCAGTCGCTGTTCATTATACAATGCCCAGCCTGGGAAAATAGTATGCTGTTCAAAAGTGCTCACACCAAGTATGTCTCCGACCAATGACTATGATGGGAATATTGCTGATCATGCTGTCGTGGGCCCAATCTCCTGCCTCAGTGACCCAAGCCACTTCTCATATTTGGTGGATGCTTATGAAGACATTTATTCACTTCCATTGGACTGCAAGGCTGTCTCTAAAGGCATTGTTCCGATATCCGGTGCAGTCACCGCTGATGGTCCAACGTTCAAGCAACTGGCAGAAAGAATCCTCAACTTTGCTGAGACAACTGTAAGTTGGTCCGAGGGAGGCATTCCTGACAATTGTGTGCAGTGTGAACAGCAAGGACAACGCTGCGCATTCAGCTCACAAAGGAATCAAACATTCTGCATGGGCCACAAACCTCATGGTACCATCCTAATCAGATACCAAAACATTATATGACAGCATAAGTGCATAACTCATGTTTTATTTCCTCATCATACTTTCCTTTTAAGTTCGTGCACTTAATTTACTAATGATAATATGATATACTACTCCTTTAGTTCACAGACACTTCCATGAGATAGCTATAAATAGGTATTTTGCAACTCGCACTACAAACCATTTGGCTAGGTAGCTTCACCTTACAAAGAGTCATCCCTAGAACTTCAGAACAAGAAGTGCATTGATGAAGCACCTTTGCTGTTGTTATAAGTGCATGATTACACCCACCAATAATTAAATCTTAGTGCCCACATCCTAGTTAGTATATGATAAAACGGGAACTGCAGTTAGATGTTTGGTTGCTTTGATGAATAATCAGTTCACACTGCGAGTGATTTGTGAAAAAAAATCATGAGCCATAACCCTTGATCCACTTTATTCACCTTAACCAACCTCAATCTGGCATAACACTCAATCCCCAGAGATGCTTTGGAGAAACAGCTTCTAATGCATTGATGAAAGGAACAACTGTCTGTTACATATATGTTCACATAATCACATTAACATTACATTTATTCCCCTAAAACGAAAACTTCTATCATATCTATTGCTATATTGAATCTTACTATGTTTTCATAAGTATATTTCTGTTTCATCTGTTAAACTATTAACAATCTTACTATATTGTTTGGTATTTGCAGGTTCACGTGTCAAAGTCATTGCAGGTACTGCAGTAATTCAAAGTTCAAACCTCCGTTTTTTTATCAAAAGAGAAGAAAAGAAACAGAGTTATCTGCCACACGTATTTTTTTCTTGTTGGCTGCTCTAACTCTACATTCTTCTGTCAAAAAGACACTACATTCTCTTATACCCATCACAATCATTTGCTCAATAGGGGATAGCTTTCTGTCCTGATGCAATGTGCTAATTTTCTATTCTGTATCTATTCAGCAACATCATCGGTAGCTGCATTTGTTGTTATTTCATTGGTGGTGGCCACTGCAATCTATCTCTCCCTGAAGCTAAGTTATAATGAAGAGGTGCACTTGAAGGTTGAAATGTTTCTAAGGACATATGGCACATCTAAACCTACAAGGTATACTTTCTCTGAAGTAAAGAAGATAGCAAGATGCTTCAAGGAAAAAGTAGGCCAAGGTGGATTTGGAACTGTATACAAAGGAAAGCTACCAAATGGAGTGCCTGTGGCAGTCAAGATGCTAGAGAACCCTACAGGGGATGGAGAAGAGTTCATTAATGAAGTTGCAACCATTGGAACGATCCACCATACAAACATTGTCCGTCTCCTAGGTTTCTGCTCTGAAGGAACAAGACGTGCTCTTGTTTATGAATTGATGCCTAACGAGTCATTGGAGAAATATATATTCTTGCGTGATCCTAATACTCAAGAGCTCCTGTCACCAGACAAGATGCTAGATATTGCTTTAGGCATTGCCCGAGGAATGGAGTACCTGCATCAAGGATGCAACCAGCGCATCCTCCACTTTGATATCAAGCCTCATAATATCTTGCTGGACTATAACTTCAGTCCAAAGATTTCGGACTTTGGTCTTGCAAAGCTGTGCCCAAGGGACCAAAGCATTATTACCTTGACCAAAGCAAGAGGCACAATGGGATACATTGCACCGGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTTTACAGTTTTGGCATGGTTGTTTTAGAAATGGTGAGTGGAAGGAGGAGCTGGGACCCAAGTATTGAGAACCAAAATGAGGTATACTTTCCAGAGTGGATCTATGAGAAAGTAATTACAGAGCAGGACTTCATACTTAGTAGGGAAATGACAGAAGAAGAGAAACAAATGGTGAGACAGCTGGCCCTTGTGGCACTGTGGTGTATTCAGTGGAACCCAAGAAATCGGCCCTCAATGACAAAGGCTGTAAACATGATAACTGGAAGGTTGCAGAACATACAGGTGCCTCCTAAGCCATTTGTTTCGTATGAAAGCCATCCTATGCCATAAACCATGGAAACTACACCACAATGGCTTAGTAAATTTTTGGGACTTATACTTTATCCACATGATGCATAGTAATGTAACGCCTAGATATTGCATAATATGTACTTTGATCATTCCACTGTATTAGCCATCTGAGGTGAGTTCACCATGTAACACAGTTAAGCAGAAAAGCATCGCATTGAACTCAACCTGCAACATAGTGGTTCAGTCGTGGTGATTACCTTGTTCAGTCGTTGCTGTGGTGTATCTCCTACTGTACTGTACTCCTAGCTGCACTAGTCAGTCAGATACTCCCATTGGCCTTTTCATGGGTCAGTATTCTGATGGATATTTTGCAAGACAATGCTGCAAGGAAATTGTAAATCTAGTGTTATCAAATGGATGCATTAAATTGGGTTTGAGCACGCTTTATGTTTAAAACAAATGAATAGCAAAGCAAAGGGATCACCATTACCATTGTC
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CDS seq | ATGAGTAAAGTCATTGCAACAACACTCCTCCTCTCCGTCATCAGCCATGGCGCCTACCCGGCCATGGGTTCAGCTTGGGAGGAGGAAGACTTCGCCAGAAATTGTCCACCGTCCTGGTGCAGTGACAGTGGACCAGAGATCCGGTTCCCTCACCAGCTTGAATCCAGCAACTCATCTTCATCATCATCATGCAGTGCTTCATGCGCGAGGCTAGCATGCTCTGGTCCAGACACCATCCTGCATCACCCATTTCTGGGGCCATGCAAGGTAACTGCCATAGATTACAAGAAAGCTGTTTTCCAGATCATCCCGCTCGTAGACTCATTGTCTTCATACCCGCTTCAGAAGCTCATCATCGACAATCTACCGGAACCAGATTATCATTCCAGTCGCTGTTCATTATACAATGCCCAGCCTGGGAAAATAGTATGCTGTTCAAAAGTGCTCACACCAAGTATGTCTCCGACCAATGACTATGATGGGAATATTGCTGATCATGCTGTCGTGGGCCCAATCTCCTGCCTCAGTGACCCAAGCCACTTCTCATATTTGGTGGATGCTTATGAAGACATTTATTCACTTCCATTGGACTGCAAGGCTGTCTCTAAAGGCATTGTTCCGATATCCGGTGCAGTCACCGCTGATGGTCCAACGTTCAAGCAACTGGCAGAAAGAATCCTCAACTTTGCTGAGACAACTGTAAGTTGGTCCGAGGGAGGCATTCCTGACAATTGTGTGCAGTGTGAACAGCAAGGACAACGCTGCGCATTCAGCTCACAAAGGAATCAAACATTCTGCATGGGCCACAAACCTCATGGTTCACGTGTCAAAGTCATTGCAGCAACATCATCGGTAGCTGCATTTGTTGTTATTTCATTGGTGGTGGCCACTGCAATCTATCTCTCCCTGAAGCTAAGTTATAATGAAGAGGTGCACTTGAAGGTTGAAATGTTTCTAAGGACATATGGCACATCTAAACCTACAAGGTATACTTTCTCTGAAGTAAAGAAGATAGCAAGATGCTTCAAGGAAAAAGTAGGCCAAGGTGGATTTGGAACTGTATACAAAGGAAAGCTACCAAATGGAGTGCCTGTGGCAGTCAAGATGCTAGAGAACCCTACAGGGGATGGAGAAGAGTTCATTAATGAAGTTGCAACCATTGGAACGATCCACCATACAAACATTGTCCGTCTCCTAGGTTTCTGCTCTGAAGGAACAAGACGTGCTCTTGTTTATGAATTGATGCCTAACGAGTCATTGGAGAAATATATATTCTTGCGTGATCCTAATACTCAAGAGCTCCTGTCACCAGACAAGATGCTAGATATTGCTTTAGGCATTGCCCGAGGAATGGAGTACCTGCATCAAGGATGCAACCAGCGCATCCTCCACTTTGATATCAAGCCTCATAATATCTTGCTGGACTATAACTTCAGTCCAAAGATTTCGGACTTTGGTCTTGCAAAGCTGTGCCCAAGGGACCAAAGCATTATTACCTTGACCAAAGCAAGAGGCACAATGGGATACATTGCACCGGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTTTACAGTTTTGGCATGGTTGTTTTAGAAATGGTGAGTGGAAGGAGGAGCTGGGACCCAAGTATTGAGAACCAAAATGAGGTATACTTTCCAGAGTGGATCTATGAGAAAGTAATTACAGAGCAGGACTTCATACTTAGTAGGGAAATGACAGAAGAAGAGAAACAAATGGTGAGACAGCTGGCCCTTGTGGCACTGTGGTGTATTCAGTGGAACCCAAGAAATCGGCCCTCAATGACAAAGGCTGTAAACATGATAACTGGAAGGTTGCAGAACATACAGGTGCCTCCTAAGCCATTTGTTTCGTATGAAAGCCATCCTATGCCATAA
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Protein seq | MSKVIATTLLLSVISHGAYPAMGSAWEEEDFARNCPPSWCSDSGPEIRFPHQLESSNSSSSSSCSASCARLACSGPDTILHHPFLGPCKVTAIDYKKAVFQIIPLVDSLSSYPLQKLIIDNLPEPDYHSSRCSLYNAQPGKIVCCSKVLTPSMSPTNDYDGNIADHAVVGPISCLSDPSHFSYLVDAYEDIYSLPLDCKAVSKGIVPISGAVTADGPTFKQLAERILNFAETTVSWSEGGIPDNCVQCEQQGQRCAFSSQRNQTFCMGHKPHGSRVKVIAATSSVAAFVVISLVVATAIYLSLKLSYNEEVHLKVEMFLRTYGTSKPTRYTFSEVKKIARCFKEKVGQGGFGTVYKGKLPNGVPVAVKMLENPTGDGEEFINEVATIGTIHHTNIVRLLGFCSEGTRRALVYELMPNESLEKYIFLRDPNTQELLSPDKMLDIALGIARGMEYLHQGCNQRILHFDIKPHNILLDYNFSPKISDFGLAKLCPRDQSIITLTKARGTMGYIAPELYSRNFGEISYKSDVYSFGMVVLEMVSGRRSWDPSIENQNEVYFPEWIYEKVITEQDFILSREMTEEEKQMVRQLALVALWCIQWNPRNRPSMTKAVNMITGRLQNIQVPPKPFVSYESHPMP |
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Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os01g0113500 | Os01t0113500-01 | Chr01 | 734071 | 737556 | + | irgsp1_rep | ||
CDS seq | ATGAGTAAAGTCATTGCAACAACACTCCTCCTCTCCGTCATCAGCCATGGCGCCTACCCGGCCATGGGTTCAGCTTGGGAGGAGGAAGACTTCGCCAGAAATTGTCCACCGTCCTGGTGCAGTGACAGTGGACCAGAGATCCGGTTCCCTCACCAGCTTGAATCCAGCAACTCATCTTCATCATCATCATGCAGTGCTTCATGCGCGAGGCTAGCATGCTCTGGTCCAGACACCATCCTGCATCACCCATTTCTGGGGCCATGCAAGGTAACTGCCATAGATTACAAGAAAGCTGTTTTCCAGATCATCCCGCTCGTAGACTCATTGTCTTCATACCCGCTTCAGAAGCTCATCATCGACAATCTACCGGAACCAGATTATCATTCCAGTCGCTGTTCATTATACAATGCCCAGCCTGGGAAAATAGTATGCTGTTCAAAAGTGCTCACACCAAGTATGTCTCCGACCAATGACTATGATGGGAATATTGCTGATCATGCTGTCGTGGGCCCAATCTCCTGCCTCAGTGACCCAAGCCACTTCTCATATTTGGTGGATGCTTATGAAGACATTTATTCACTTCCATTGGACTGCAAGGCTGTCTCTAAAGGCATTGTTCCGATATCCGGTGCAGTCACCGCTGATGGTCCAACGTTCAAGCAACTGGCAGAAAGAATCCTCAACTTTGCTGAGACAACTGTAAGTTGGTCCGAGGGAGGCATTCCTGACAATTGTGTGCAGTGTGAACAGCAAGGACAACGCTGCGCATTCAGCTCACAAAGGAATCAAACATTCTGCATGGGCCACAAACCTCATGGTTCACGTGTCAAAGTCATTGCAGCAACATCATCGGTAGCTGCATTTGTTGTTATTTCATTGGTGGTGGCCACTGCAATCTATCTCTCCCTGAAGCTAAGTTATAATGAAGAGGTGCACTTGAAGGTTGAAATGTTTCTAAGGACATATGGCACATCTAAACCTACAAGGTATACTTTCTCTGAAGTAAAGAAGATAGCAAGATGCTTCAAGGAAAAAGTAGGCCAAGGTGGATTTGGAACTGTATACAAAGGAAAGCTACCAAATGGAGTGCCTGTGGCAGTCAAGATGCTAGAGAACCCTACAGGGGATGGAGAAGAGTTCATTAATGAAGTTGCAACCATTGGAACGATCCACCATACAAACATTGTCCGTCTCCTAGGTTTCTGCTCTGAAGGAACAAGACGTGCTCTTGTTTATGAATTGATGCCTAACGAGTCATTGGAGAAATATATATTCTTGCGTGATCCTAATACTCAAGAGCTCCTGTCACCAGACAAGATGCTAGATATTGCTTTAGGCATTGCCCGAGGAATGGAGTACCTGCATCAAGGATGCAACCAGCGCATCCTCCACTTTGATATCAAGCCTCATAATATCTTGCTGGACTATAACTTCAGTCCAAAGATTTCGGACTTTGGTCTTGCAAAGCTGTGCCCAAGGGACCAAAGCATTATTACCTTGACCAAAGCAAGAGGCACAATGGGATACATTGCACCGGAGCTATATTCTAGGAACTTTGGGGAGATATCTTACAAGTCAGATGTTTACAGTTTTGGCATGGTTGTTTTAGAAATGGTGAGTGGAAGGAGGAGCTGGGACCCAAGTATTGAGAACCAAAATGAGGTATACTTTCCAGAGTGGATCTATGAGAAAGTAATTACAGAGCAGGACTTCATACTTAGTAGGGAAATGACAGAAGAAGAGAAACAAATGGTGAGACAGCTGGCCCTTGTGGCACTGTGGTGTATTCAGTGGAACCCAAGAAATCGGCCCTCAATGACAAAGGCTGTAAACATGATAACTGGAAGGTTGCAGAACATACAGGTGCCTCCTAAGCCATTTGTTTCGTATGAAAGCCATCCTATGCCATAA
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Protein seq | MSKVIATTLLLSVISHGAYPAMGSAWEEEDFARNCPPSWCSDSGPEIRFPHQLESSNSSSSSSCSASCARLACSGPDTILHHPFLGPCKVTAIDYKKAVFQIIPLVDSLSSYPLQKLIIDNLPEPDYHSSRCSLYNAQPGKIVCCSKVLTPSMSPTNDYDGNIADHAVVGPISCLSDPSHFSYLVDAYEDIYSLPLDCKAVSKGIVPISGAVTADGPTFKQLAERILNFAETTVSWSEGGIPDNCVQCEQQGQRCAFSSQRNQTFCMGHKPHGSRVKVIAATSSVAAFVVISLVVATAIYLSLKLSYNEEVHLKVEMFLRTYGTSKPTRYTFSEVKKIARCFKEKVGQGGFGTVYKGKLPNGVPVAVKMLENPTGDGEEFINEVATIGTIHHTNIVRLLGFCSEGTRRALVYELMPNESLEKYIFLRDPNTQELLSPDKMLDIALGIARGMEYLHQGCNQRILHFDIKPHNILLDYNFSPKISDFGLAKLCPRDQSIITLTKARGTMGYIAPELYSRNFGEISYKSDVYSFGMVVLEMVSGRRSWDPSIENQNEVYFPEWIYEKVITEQDFILSREMTEEEKQMVRQLALVALWCIQWNPRNRPSMTKAVNMITGRLQNIQVPPKPFVSYESHPMP
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0113500 | RBH | 0.240110 | 0.393982 | 0.000000 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02460 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os01g0114900 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001330 | SBH | 0.173494 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0001080 | SBH | 0.069754 | 0.307502 | 0.332710 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001330 | SBH | 0.545073 | 0.000000 | 1.479499 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001230 | SBH | 0.000000 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001080 | SBH | 0.185952 | 2.071903 | 1.005281 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0013800 | SBH | 1.126013 | 2.7424635 | 3.4048895 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001030 | SBH | 0.000000 | 0.403616 | 0.102290 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0013200 | RBH | 0.6102545 | 0.705915 | 2.945911 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0001030 | RBH | 0.022231 | 0.029062 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001390 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001040 | RBH | 0.367198 | 1.186890 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0001290 | SBH | 1.755259 | 0.526992 | 0.360528 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0001020 | SBH | 0.276348 | 0.793018 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001390 | SBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0000980 | SBH | 0.068539 | 1.712051 | 0.473257 |