Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g27370 | OGI:08000190 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:16092281-16102824 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TATCCTTCCCCAATTTCTCGCCTCTCGCGGCCCTGTCAAAAAAAAAAAAATAAATCGCCTCTTTGTTTTCCTCCCGTCGCTATCCTCCCTTGCTCTCGCCGCTGCGCCTGGCAGTGAGGAGGACGGGACCAGTGGATGCAGCGGCCCCGGCCTTGCGCCTCGCTTCGCCGTCATCGTCTCTGCGGCGTGCTCCTACCATCGCCATCCTCCTCTTGCTCCCGCCGCGGCGCCCACCAAGCACTCAGGCAGGATGGGATACCGTCTGCCACCTGCTGCCTGGCGCCGCCCTCCTTTCCGTTTTCCTCTGCATCCTCTTCCTCCGTGTGCGGCAACAGCGGCGGGCGTCCACGGCGACGCCGTCGACGAGGCGGGGAAACGCTAGGCACGGCCTTCTCTTGCCTTCTTGCCTTGGTGAACTTGGTCTATGGGTATAGCGTGCCTGACTTGTGGCCCTCCTGCTTGCTTTTTCTTTTCTACCCACCATACAATAGGTTTATGTTTTGATGGATGGTTTTAATGTCAGTTTTTTTTTGTCTTCTTTGGTGTGTCTCTGTTATGTGGGTCTATGCATCCTCTCTATTGTTTAATATCGTGTGATTTGTTCATCGGTGCTAGCCGTCTCCTTCTCGGCGTGGAAGACCGCGCCAACCGTGGGAGGCAGCTTGCCAGGGCGCTGCTCGCTCAGTGGATGTGCGCTTAGTGGGTGCGGTGCAATGTGATTCGTTTATTTCTCTGCCCTATGTCACAGCGCTGTGGGTGCTCATCGTCCATGCACCCTCTGTCTCTGCACTGTGGTCCAGCCCTGTTTGTTTCGTGTGATTGGATCACGGGTGTTGGTCCATCCAGATTATATGTGCCATTTGGTTTCACTGGATTCTTTTGGTTGGATGGCATCTCTTTGTTTCACTGCAGGGTGGGATCATCTTTTATGGGGGCCACTACGCCGATTTCTTATTGGTGGGTTTACATTGTACTACGTGAAAATTGTTTTCCTCTTTCGATGCAACCTATGGTTGAGGCTTCTTTTTTTCTTATAACGCCACAACGATACTTCTCCCTCTTTGCCTTTTTCGCTTTGCCATCGTCGCTTTCCCCGCCTACTCATCTGTTGTTTCCCGCCATCGTTTTGCCTGCTTTCCCTTCGATTTCATTCATCGATCATGGCTGGGTAAGATATCTGGTGATGATATTATCTTTTATTATGTGGGTCTTTTTCTTCTTCTTTACATCTAGCTGATTCCTCATTTTATTTACCCGTGTGTTTTTGCTTGCATTGTTTTTAGGGGGGAAGATCTGCACGGGCTGCACCGCTGCTTCAAAGGATCGTGATCGTTTTTCTTTATCAGTTCAAGAGCTGTCAGTGTAACTTGGCAGGTTTGTTTTCTTCTCTTTTCGCAATTGTAGCTCTCATTGATCCTTACAATTTATTTTTTTCATTATACTAACTGAATCATCGCTATTTTGTAGCTCTCATTCGCGTGCGTGGTACCTCTCTGCTTTTCTTCTTCGCTTCCAGCCTTCCACATCACTGCTCATCTCGCTATTGTTGGTCCATCTTTGTTGTTGGTTCATCGTGCATCTTTCATCGAAGGTATTTACTTCCTTGCTATTTTTTTGTTTATTTTGCTCATTTCTTTGTTGTGCTATACTTATTTTCACCCATTGCGTGTCATGCGAGTGATCGCTTCGCATTATATGTGTCTGATGATGCTTTATTATCTTGCTTATTTGCTCCTATCAATTTCTGCATATGTGTGAGCTAAAGCGATTCCATGCTTTATATGGCCTTCTTTTTTACATCAATATATTTTTGTGCTCTATGATAGCTTCGTTGCTACTGTGTTTTTTTTTGTGTGTAGCTGATTGTTTCCTTTATAAATGCACTGTCTTTTTTTATGCTTTTCAGTGGCCTTGTGATTGTAGAGATTAGACCTATTAATTTTTATAACGGTCTATTTGTTCACTTCCGCTTGTCATTTCATTGCTCACTGTCCATGCCTTCTATCTAAACTATCTTTTTTCGTTGATATTTTCTTTCTATGGTATGTATACCCAAAATATTCGCTACAGATGTCAGAGGAGGCTCTCAGTAGGGTTCGTGCTAGCCGAGAAAGACGAGCTGCGAATATTTTGACCCGTCAGCTTGTAATGCATATACAACATTCAGTACTAGGACCGATTCAGCCTAGGCAAGTAGACGAGCGCAAAAGAAAATGTTCACTTATGGATTTCACACCTCAGTTGGCTAAGCTGAATAGGCAAAGGCGTTGTTTGCTACGCTCAAAGATGGAGCCTGTACCTCCTGTGCACGCTGAAAATGGTACCCAATTAATCTTTTCACGTATTGATTGTGTTTCATGACGCACAATTTTTCATAAGATGTTACTGTCAAATCTGTTCATTGCAGCTGCCGGTGTAAAAACCAATGGTAGTTCATCACGCACGAATAAGGAGTACATCCAGTCATTAAAGGGTTCGCGACCTATGCTAAATACAAAACATACTGCTATTTATTATAAAACCAGCTTTTAACAGTCCTAAGTATTTTGCTACAGCCTCATACCCAGGGAGATCGTACTATGGTCCACCAACATATGAGTGTCCGTACTGTGGCGCTGTCTTCTGGTACCAGGAGAGAGTGAAAAGCACCTCTGCTGTTTCACAGCGAAGAATAGTTTATAACCTCTGCTGCAAGGGCGGTAAAATACAATTGCCTAAGCTGCGCTCGCCTCCTGAACCACTTGCGACATTATTAAACTTTAATGGTGATGCACGATCCAAGAGATTCTTAAGGCAAATACAATCATACAATTCGATGTTCGCTTTCACTTCACTGGGTGCAACCATTGATAGATTGATTAATACTGGCAATGCACCTTATGTGTTCAAGATTAATGGTGTTGTGCACCACAGAATTGGCAGTCTTTTGCCATCAAGTGGGTCACCTCCAAAATTTGCTCAACTATACATCTATGATCCACAAAATGAGACACAAAATCGATTAAATATTTTTGGAAATGACAGTGATGATGCAGATAAACCAGACCCTGAAATTGTTAGTGCATTGTCATCCATGCTTGATAGGCACAATAGTCTTGTCCAGACATTCAGATACGCTAGAGAGCGACTTTCTCAGCATGGTGACCAAAAGATAACTCTTCGCCTTCTAGGCTGCAATGCTAAAGATGACGTGCAATATAATTTACCGACGAGTGGTGAAATTGCTGCCATAATAGTAGGCGATTTCTGTGCAAAAGAGTACAAGTTTGATCTTCTTGTGTATGATAATGATCGTGGTTTACATCAAGTTTCTTCATTGCATCCATCATATATGGCTTTGCAATATCCTTTATTATTTCCATATGGTGAACGTGGATTTCATCTAGGCATTCATTACAACAATTATGATGGGATTGGAAGAAAGTATGTTACAATGCTTGAATTCTTTAGATACGAAATGCACTATAGACTAAATGAACCAAATCCTTTCACATGCTATGGCCGACTAAGCGATCAGAGTGTTGTTGATGCCTATTCTTCGATAGAAGCTAATAGATTACAATTTATAATTGATCATCAAAACGAGTTGCGTGCTGAATCTTTAGATGGAATCGTAGATGCAATCGATAAAGGTGTCACTGATGGCGATTCAGTTGGTAAGCGCGTTATACTTCCTGCCAGCTTCACTGGAGGAAGGCGATATATGGTAATGAACTACCAAGATGCAATGGCAATATGCCGTGTCTATGGCTCGCCTGATCTATTTGTCACATACACAAGCAATTCTAAGTGGCAAGAAATTTATGATGCAATACGATTTGAGCCTGGACAACAGCCATCAGATAGACCTGATATGATAGTTAGGGTGTTTAACATGAAGGTCAGTGACTTTATAACTGACATTAGAGAAGGAAGGACTTTCGGTAAAGTTCTTGCAGGTATTGTTGACTCCTATTTTTGCATGCAGTTCTATTTAAATATGATTCTCATTACTTCTCTTAAACTATTCCAGTGCTGTACAATGTTGAATTCCAAAAGCGTGGGCTGCCACACATACACTGTTTGGTCTGGCTTGCAGCGCCCACTGCTGAAATATCGACATCCATCATCGATGGATTCATTTGTGCTGAAATACCTGACTACGACACTGATCGGTTAGGATATGAATTAGTTAGTGAATTTATGATGCATGGCCCCTGTGGAAATGCAAACAAAAATTGCCCTTGCATGAAAGATAATAAATGCTCGAAAAATTATCCTAAGGATTTTCAAGATCAAACAATAATTGATGAATCTGGTTTTACGATATATAGACGATGAAACGATGGCCGACATATTATCAAAAATGGAATTCCATTGGATAACAGATCTGTTGTTCCATATAACATGAAATTGCTTAAAACATACGAGGCACATATAAATGTTGAGTGGTGTAACAAATCAAACTTGATAAAATACCTATTTAAATACATCATAAAAGGACAAGATCGTGCTAGGATATATTTCGAGACAACTGCTAAAACAGGAAATGTGTCGCCAAATCATGACTTAGCTCCACGCAATGAAATATTGGAATATATGGATGCTAGATTCCTCTCCACATGTGAAGCACTACATCGATCATTTGAATTTGACATACATTACAGAATACCTCCTGTCGAACGGTTAGTTGTCCATTTGCCTGAAAAAAACTATGTTAGATACGAAAAAGGCTCTGATTTACGAGCAGTGCTTAATAGTCCTGCTGCGAAGCGTTCAATGCTAACTGAATGGTTTGAAGCTAATAAAAAACATCTGAAAGCACGTTCGCTGACATACTGTGAATTTCCAAGAGAATGGTCATGGGAGCCTTCATCTAGAACATGGCGTGAACGAACACCTGCTCCTAAAATTGGTAGAATTTATTATGTGCATCCAACTGCTGGTGAACTCTATTACCTACGAATGTTACTAATGATAGTTAGAGGTGCACAAAGTTATGCTGATGTGCGCACACATAATGACATTGTTTATGCCACATATAGAGAGGCATGCGAGGCAAGAGGACTTCTTGAAGGAGATAGTGAATGGTACCTTCTTTTCGATGAAGCAATTCTATTTGCGTCTTCGCATCAACTTAGACAACTTTTTGTTACTGTTGTTCTTTATTGCTCTGTTACTAATGTGCGTTCATTGTTTGATAAATATTGGCTCTACATGACAGACGATATTCATAATAAAGTAAAAAAGACATTGGATAATCCACGCTGCATTGTCCCACAGGAACACTTACTCAACCTACTCTTATCCGAGCTTGCTGTCGTGTTTGGGAACAGTGGTGGTTGCATAAAAGATTTTAACTTGCCACAGCCATCTCCACTTCACACAGCTATATTGGAAATAGACTAATCGATGAAGAGCTTACATTCACTCATCTTTTGATGTCTTTGCATGCAAATTCTTTAATAGCACAGTTAAATGCTGACCAGAAACAAATTTTTGATACGATAATTTCTCGAGTAGTTGCAGATCAGCCTGGGTTTTTTTTTTGTGTCTGGCCATGGTAGAATTGGTAAGACCTTTCTTTGGAATGCTATTATTGCAAAGCTCAGATCAGAAAATAAAATTGTGCTCGCTGTTGCTTCATCAGGAGTAGCATCTTTGTTATTACCAAGAGGTAGAACGGCTCACTCTCGATTCAAAATACCAATCGACATTGATGAAAACAGTATTTGCAATGTAAAACGAGGAACTATGCTATCTGAACTTTTGCTAGAGACTGCACTAATTAGGAGATGAGGCTCCAATGACACATAGGCGTTGTTTTGAGGCACTAGATCGTACATTACGTGATATCCTTTCTGAGACAAGTCCTCCCAACTCTATTATACCTTTTGGAGGAAAACCTGTTGTTCTAGGTGGTGATTTCAGACAAATATTACCTGTTGTTCCTAAAGGTTCACGTCATGCTGTTATTAATGCATCAATCACAAACTCTGACCTATGGAAAAATGTTTCGATTTTAACTCTGAACATAAATATGAGATTACTTAATCCAGATCTGCCAGTACACAAAAGAAATGAATTGCGTGATTTTAGTGAATGGATTTTAGCCGTTGGTAATGGTACTGTGCCTATGATTGCAAAAGAAGGTGAAGCTTATCCTTCGTGGTTAACTATTCCTGATGATTTGCTTTTTAAAACTGATCATGACAAGATAGATGCTATTGTTAGAGAAATATATCCTAATTTCCTTGCATCATACAAAAATCCTGAATATCTAGCTTCTCGAGCCATTCTATGTCCTAACAATGCAACGGTTGATGAAATAAATGACTATGTTATTAGCTTGCTACCAGCAGATGGAAGAACTTATTTAAGCTGCGATACCATATCAAAGTGCTCTGAACAAATTCCAGACTTTGACCTGCTGTACCCCCCCGAATTCCTCAACTCAATAAATGCTGCTAATTTTCCTACACATAAACTTGTGCTGAAAGAGGGAGTTGTCATCATGCTGTTGCGAAACCCCAACCAATCAATAGGTCTCTGCAATGGAACAAGGCTGTTAATTTCTACTTTAGGCGAGAGAATTTTGCAGTGCATAGTATTGATTGGATTGAACATTGGTGAAACTGTTTATATACCCAGAATCACACTCAGTACAACAAAACTTAAATGGCCTTTTACATTACAGAGAAGACAATTCCCTGTTCGAGTTTGCTATTCAATGACTATTAATAAAAGCCAAGGCCAAACACTTTAGCAAGTTGGTGTATACCTTAGAAAACCAGTTTTTACACATGGTCAACTCTACGTTGCTATATCAAGAGCAACCAGCCGATCAGGGCTGAAGATATTGATTGAGAATGATGATGGATCATGTGGGAATGAAACAAGAAATGTTGTTTACACTGAGATACTACCTGCTACGTTCACAGCGGTGCTGCTCTCAACATTGCTGCATACTGTGTTTCATTTTATTTCCTACGAAAGCTACTATAATAATGCAAATATACTCTTGTTGCAGGCTCCGCCGCTTGATACGTAGTGTTTTTTGTCAACAAGAACCCCCCTGATGCTTTTGTACATACATTTCTAAATAAATGGATGGACATAGGCACTATTGTATAGTATATATTTCCTGCAATATAAGGCTCTTATAATCTTAAGTAATGTTCTTTCTATCATCATTTTTCATCGCTATATCATTACTCCATTTTATATACTGAAATGTTTATGTTCTTTGCAGAGTACAAATGGCGCACGCGCTCATTTCACAGCTTTACCCTGGGGATTCAGACAAAAAGATTCTCGCAAGGGTTTCTAGACTTTGGCATTTTCGTGATCTGAATGATGATACAAACATCCTGCATACAGACCTTGTCTTACTTGATGAAGTGGTACTTATCAAATCACTACTCATGCCTCTTATTATTTGTGTACATTAGAATACCAAACGTATTACTAAAATAGTATATCATATTCAAAATTTGAAGGGCAATAGCACTCATGTTCAGATGTATCGAGGCGCAATTGAGGTTCTGAAACCTCTCATCCATGAAGGGAACGTCTACTACATTGAGTCGTTCACTGTCAAAGATGCAAACAGAACTTATAGACCAGTTTCAAATGACTTCATGATTTTATTCAGTAAATGGACAACCTTAGAAGAATGCATTGACATCCCAGCTGATTTCCCTGCCATAACATTTTCATTGACACCTTTCCAAGAAATCCCCTCTCTTGTTGATAAAAACATATTCTATGTTGGTATGATATATTACTATAATATTTTCATTTATGTATCTGTACATTGCCTTATAACACTTTGATCTACTCTATTTTCATGTGCAAACAGATATTATGGGCGTCATTACTGAGATCAGTTCCACATCTACTGTGCGTCCAAGGTCAAGGGATGCTGATAGTTTAAAAAGAACATTGCAGATCTGTGATGCAAGGTTAGTTATGTAAAACAGAATAATTTTCATTTAAATAAGCTTCGCATTATGTTATAAACTAATATTTACACTAATTATCATTTAAATAGCAGTTCGATGAAGTGTCCATCTTTCATTTTATATTCCAATTATAACTACACTAATTTTACTGTTAATGCAAAACACAGCAACTCAACACTGCCTGTCACACTGTGGGGAGATCGATCAACTGCAGAAAATATATAAGGATGGCCAAACTAAACCCCAGGTTGTCGTGTTTGTTGGAACACTTGTCAGAGATTATGCAGGGATAGGTAAATTTCCCTATGCATACTAAATTGCTAATTACTATATATTGCATGCAATGACTACAATCTGAATCTCTAGCTCATTGTATACAGGCTTAACAATAACTGGTAGCTCACCATGCAAATGGTATATCAATCTGGACATACCTGACGTGCTCGAATTGAAAGAAAGGTACTATTATCACCTATTTTTTTCATATATTAGGTTCATTTGCAGTGCTTTAATTCTCGCTGGCTCTAAAACATAGATTAAAAACTAGCCATTGCTTTTCTTTACAGGTTCAGTGTCAACTTTCAGCCAATCAAATGGGTTGAAAATGCTGCTCCTGCATTCAACCAAGACACTCCAGAGGAAAAAACCATTAAAGAAATTCTAAAACTAAATCCGCACAAATATAAGATCTATTCTACTCCATGATTTTTTATATGCATTTCATACTTTTGCTTTGTTTTGTATAACCGACAATTCTCTTTCTCTACAGCGAGCATGTTTTATTGTCAATGTTACTATCAAGAGCATACATGATGAAAACTGCTGGTGGTACAATTCATGTGACCGATGCTGCAGAACTTCAAAGCCATATGGTTCTACCTATAGATGCTCTAGCTGTTGTTATATAGGAATGCCAGTGCCAAGGTTAGAAAAACACCGAACACAATATTCTACACATTTATGAATTCCCAGTACAAATTGTAATGACCATATATATTGTACACATACAGATACAAAGTTGTGCTCACTGCCACAGACAATACTTCTGAAGCTGCATTTGTCCTCTTCGGACGAATTGCACATCGCCTAATACACAGACCAGTGGAGTCTCTAATCGAAGAAAATCCACCTGACTTTATCCTAGCTGAGATCCAAGCTCTTGTAGATCAAGCCTTTGTATGGAATGTCAGCTTCACTAAACACACAGTTAAACGGAATCAAGAATCCTTACAGGTCAATAGCATTGTATCATCTGGTGCCCCAAAACAGCACTTCCTGCCTATCTCATCGTCTGCTTCAGGAGGCACCTCAACTATCGTACCACTGAGCCCTGGCACTTCACTCCAAACACCACCCGCAGCAAGCGAAAGCAGTATTGAATAACAGTCATCAACCAGAGGAAAGCAAAGTGCATCTCTACAGCCAAGTCTATCAACACCAACAAAATATGTTGTTAGCCCTGCAGCAGATGACACACCAACTAGCAAGTCCAACCCCTCAGGATCCACCAAAAAGAAATATGTTGTCTTAGCATATCCTATGCAATCTCAAACAATGCAGCCTTCCATTGATGATAAGGTTAGTATTCCACCAGTTATACTGATATTCAGCCTATTTTCAGCACTACCTTACAAGCAATCTAATCTCCTACTTAATTTTGCAAGGCCACAACTGAGCCAAAGAGTGGACAGAAAACTTTGGAACATCCATCTCTTCCTGCAGCTGGACCGTCTGAATCTGAATCTGAACATAAGGTACTGTCACATCTCTTTGCTTCCATATAACATATTAGATACTAACACATTTATCTATCTTATAAGATCAAAGGAAATTTTGTCAATACACCTGATGATCCACCTATTAGCCCTTCTGTGCCTAGCAAAAGTGCAAGCAAAAAAAGGTACCTATGGACAGCTTGCCTACAGTGCATCAGTGATAGATGCTTACAATATTGCTAATTTAACTGACTGTTATAACCTAATATTACACAGGACCAACACTATAGCTTCAGTTCCAGCTCCACCTGCTAAGAAGCTATTCAAAGAACATTCCCAGCACACAAAGGATCAAAGGTAATCCTCCTATTTCTTGACAGTACCTAAGCATTTTGACAGCCATAATACAAAAGCAATATATAGCTATAGACAAGCTTTAGGCCTCTAATTTTTTTTTTCCATGCAGTGAATGAGATGCTTGTGTCCAGCCATCCAACAGATATTTTGGGTGTTTGTACAAAACCTATGTCCACTGCTAGAAGAAAGGAGGCATCCAAAATAAAGCTACAAAGTTAAAAGCAAGACTCTTTTGCTGAAGACCTACATCCTAATATTAATGTATATAAGTGGTCATGCTGCTATCACCTTTGCTAGAACATATGCTATGTATTTACTAATAGAAGTACTGCCTCCTACATGGAACATTAGGCAACTATGACACATATCTAGCTATCAACCCTCTATCCTGCCAGCTACATAATTGCAATGAAATAAGGTTTGCAGGCCACTGCTATATGAAATTTAGCATGCACTTCTGCCATCATGCTTGCTTCTTAAAATTTGGTGTGCATCTTCATTTATCTAGACACATAAATTTGATTGTTTC
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| CDS seq | ATGGCGCACGCGCTCATTTCACAGCTTTACCCTGGGGATTCAGACAAAAAGATTCTCGCAAGGGTTTCTAGACTTTGGCATTTTCGTGATCTGAATGATGATACAAACATCCTGCATACAGACCTTGTCTTACTTGATGAAGTGGGCAATAGCACTCATGTTCAGATGTATCGAGGCGCAATTGAGGTTCTGAAACCTCTCATCCATGAAGGGAACGTCTACTACATTGAGTCGTTCACTGTCAAAGATGCAAACAGAACTTATAGACCAGTTTCAAATGACTTCATGATTTTATTCAGTAAATGGACAACCTTAGAAGAATGCATTGACATCCCAGCTGATTTCCCTGCCATAACATTTTCATTGACACCTTTCCAAGAAATCCCCTCTCTTGTTGATAAAAACATATTCTATGTTGATATTATGGGCGTCATTACTGAGATCAGTTCCACATCTACTGTGCGTCCAAGGTCAAGGGATGCTGATAGTTTAAAAAGAACATTGCAGATCTGTGATGCAAGCAACTCAACACTGCCTGTCACACTGTGGGGAGATCGATCAACTGCAGAAAATATATAA
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| Protein seq | MAHALISQLYPGDSDKKILARVSRLWHFRDLNDDTNILHTDLVLLDEVGNSTHVQMYRGAIEVLKPLIHEGNVYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPAITFSLTPFQEIPSLVDKNIFYVDIMGVITEISSTSTVRPRSRDADSLKRTLQICDASNSTLPVTLWGDRSTAENI |
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| Function | Replication protein A 70 kDa DNA-binding subunit C [UniProtKB/Swiss-Prot:Q65XV7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g27370 | LOC_Os12g27370.1 | Chr12 | 16092281 | 16102824 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCGCACGCGCTCATTTCACAGCTTTACCCTGGGGATTCAGACAAAAAGATTCTCGCAAGGGTTTCTAGACTTTGGCATTTTCGTGATCTGAATGATGATACAAACATCCTGCATACAGACCTTGTCTTACTTGATGAAGTGGGCAATAGCACTCATGTTCAGATGTATCGAGGCGCAATTGAGGTTCTGAAACCTCTCATCCATGAAGGGAACGTCTACTACATTGAGTCGTTCACTGTCAAAGATGCAAACAGAACTTATAGACCAGTTTCAAATGACTTCATGATTTTATTCAGTAAATGGACAACCTTAGAAGAATGCATTGACATCCCAGCTGATTTCCCTGCCATAACATTTTCATTGACACCTTTCCAAGAAATCCCCTCTCTTGTTGATAAAAACATATTCTATGTTGATATTATGGGCGTCATTACTGAGATCAGTTCCACATCTACTGTGCGTCCAAGGTCAAGGGATGCTGATAGTTTAAAAAGAACATTGCAGATCTGTGATGCAAGCAACTCAACACTGCCTGTCACACTGTGGGGAGATCGATCAACTGCAGAAAATATATAA
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| Protein seq | MAHALISQLYPGDSDKKILARVSRLWHFRDLNDDTNILHTDLVLLDEVGNSTHVQMYRGAIEVLKPLIHEGNVYYIESFTVKDANRTYRPVSNDFMILFSKWTTLEECIDIPADFPAITFSLTPFQEIPSLVDKNIFYVDIMGVITEISSTSTVRPRSRDADSLKRTLQICDASNSTLPVTLWGDRSTAENI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.558578 | 5.142900 | 0.928795 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g26850 | SBH | 0.860538 | 0.709053 | 0.083404 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0012740 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0004250 | SBH | 1.150551 | 5.539506 | 4.648852 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0012260 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0233600 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0012450 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0255700 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0012260 | RBH | 0.0 | 0.0 | 0.0 |
