Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os12g11370		OGI:12015420 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr12:6138570-6142158		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		TTAGAATAATCGACAGTTCACATTTCTGTTTGGTTTTCTGTACATGTTCTCAATGATTCATATTGTGAAGCTCACAAAATTAAAATACTCAATCATACATATATCGTAGATGCAGACAACTTGCCCCAACACATTACAAGAACCAAGTGGAGGAGCTACTACCTGGCAAGTACGAACTCATTTTACTAGATACAGTGGTGCCTGAATTATTGCTCAGATCAGAGTGTTCATAGCTTCAATTACAAAAATTTGCCTGTCTCAGCACTGTTAGAGTTGTATACATAAACGAAGTACTCTCATCGCTGTTTTTTCATATGCCTTCCCCATACAATTAGGATTGTAATTGCAAAGGAAACACCAAAACCCAATGCAGTGAAGAGGACTAGTAGAACATCTATGGATTTCTCCGAAACATATGGCATCACAGTTGACTCTTGTGGGTTATCACATTGTTTAGATAATGGCGGTCCACACAAACCAGTGTTTCCAAGAAAAGAGTTGTTCGAAAATGTGGAAAACTGATATGAATTTGGTATTCTTCCAACCAACGTGTTATAAGACAAATTCAGTATTGAAAGGAAGTTGAGTGATGCTAGCTCCTTGGGAATTTCACCAAAGAGCTCATTTGAGGAGAGGTCCAGTGACTCAAGTTGATTCAGCCTGCCAAACTGAGTTGGAATTGGTCCTGTTAGTGAATTGTGAGACATGTTGAGCCCATGAAGCAGAACAAGCTCCCCGATAGTCTCAGGAATGGTGCCATGGAATGCATTATTCGAGAAATCAATCAGCACAAGGGTCCTCAAGATCTTGGAAATTGTGATGTAATTCCCTTTGTATGTAACTGCAGCAGTAAACTGGTATGTTTGCCCATGGTAATATTGATTTTCCATGACTAATGTATCATTATCAGATATGGCATTCATGGACTTGAGCATCGTAAACCATGCTTCTGGCAATGTTCCATTGAAGTTATTTGAGGCCATATCGGCAATTCTGAGCTCTGTAAATTCACAACTGTTTCCATCAACTGTATATGAAGGATCCATTATTTGTCCAGTGAACTTGTTAGACTTGAGGGCAAGGACTTGAAGTTTAGGAAGTTTGCTCATCCAACATGGGAAGGAGTCACTAATCTCATTGTTTCCAATGTCGAGGATCTCCAAGTTCCTGCAAGCAACTAGAGATCTGGGTATCCTCCCCTCAAACAAATTGCCACTTAAATCTATTGCCTCAAGTGCACAACCTTCCTTGATGTTATCTGGTATTGTTCCAACAAGTTTATTTTCCTTCAGATTTAATATTTGTAATGCAGTGACATCCTCCATTAAACAAGATGGGATCGAACCACTCAAGTTATTGTAAGAGAGATCAATGAGTTGTAGTCTCGGAGCACTACAGATTGATGGAATATTTCCAGACAGTTTGTTTTTGGAAGCCTTGAAAGTAAAAGTTTCACCAAGGTAAGTTGAGTAATGAAGAGGCATGGAGGAGAACTGGTTGCTTGAATAATCTAACATGGTACTACCTTCTTGTGGTACAGGTATGGGCCCTTCAATGCTGTTGAAACTGAGATCAAAGAAGTCAATCTCAAGAGGAAGCAGAGGATCTGATCCAAGACTTGTAATGTTATTGTGTGATATGTTCAGGAGGAGAAAGTACATGCCTCTCCATGTCTCCCATGCCCACTGAGGTATAGCTCCCTGGATTTTGTTATGCGAAAGGTCAAGAGTGGTGATCTCATGGAGATGCTTCAAGATGTTGGGAAAGGTTGATATACTGCAAGATGCTAACCTTAAGAGTTTTATTTTTGGGAAGGGCACCAACGATGAACTGTTTTCTCCATGTAGCACAAGTAGTTTATTGTTTGAGAGATTCAGGACAGATAGGTTTTTCAGTTTTGTGAATGACGTGAGTTCCACCGTGCCAGCCAAATTGTTCGAATGGAGTTGCAGAGATTGCAACTGAGTCAAATTAAAGATCTGCGGAGGCACCTTCCCTGAAAACTTGCAGTTGTACAATGCTAACATACTCAATTTCTTTAAGTTTCCTATTGAGGAAGGTATCTCTCCAGACAATCCACAGTCAGAGAACTTGAGAACAGTAAGAGAAGTTAGGTTTGATATCCACGGTGCCATGGATCCTGTTAGCTGTATCCCAGACACTTCTAGCAAATCCAGGTATTTGAGGCTACCTAGTGAAGAGGGCAGCATTCCAGAGAAGCCACTGGCACCAAGGTCCAGCTTCGTAAGAGATTTGAGATTGCTTATGGAACTCGGTATTATACCTGTGAAGTTCGTGCTACTGATAAGAAGATTCTCTAACTTACTGTCCTGTGAGAAATTGGGCAGACTACCTGATAACCCAGGATTATTAGTGATGTTAATTGTTACCAACTTCTTGTGCTGGAAGATGATGGGAGGAAACAATCCTTCAAACTTGTTTTTGGACAGTTGAAGAACAGTGAGGTTGGAAAAGCCAGCCAAGAACTCTGGCACTGAACCTGACAAGTGGTTGTAATGAAGCTCAATCCTAGTGAGCGAATTCATGGAAGACAAGGATGTGCAGATGGGACCTGACAATGAGCAGTAAGGTAAACTTAGAACCTGAAGCTTAGGTGTAAACTTAGCTATGTCGTCACACCACCGTTCGCCGTTGCCGGACATATCCACCATTCCCATATGGAGCTCCTCCAGGTTGGTAAGGTTTGCCAGCAAGGTCTCCATGTTTGGCACTGAGAGCTGCCAGAAGTTGTCTGAAGCGAACGGCATCATCTTGTTCTCGTCATCATAATAAATGATGTAGAAGCTTGTGGAGAGGTCAAGGTACACCAAGTTCACAAGGCTTCCGATGCCAGCCGGCACCTCACCGGCGATGTTGGTGTCAGAGAGGTCAAGATGGGTGAGCTCGGTGAGATTCTCGAACCCGGTTACCGGGAGCTGGGACATGCTGAAGTTGTTACCAGAGATGTCAAGGTACCTGAGTGAGGTTAACCTGAAGAGTGCAGGGCTGATGCTGCCGGCTTGCAGGTTGTGGCCACCCAAGACGAGCGAGGTGACACGGCCATCTTCGCCGCCACCGCAGTCGACGCCGTCCCAGTGGCAGCAATCTGTGCCGGTGATCCACGACCGAAATGCAGTGGAGTAGCCGCCCGCCGTCTTGTTGAAGGAGTTCTTCAGCCGGAGCAGCGCGGAGGCCTGGTCCGGGAGGCACTGAATTACCGGTGCCGTCGCATCGTCGGTGAGCGCGGCGATGGCCTGGACTTGCAGGAGGATGTGCAGCATGGTAAGCAATGGTTTCGCGAGATGGTGAGGACGAACCAGCCTCTTGGTGGACGACGACATGGCGAAGTCGTCTAAGGTTGGATACTAGCTGTGTTTGTTTTCAACTCTATGTTAGTCAGTACAGTTCAAGAAATCGTCTGCCCCTAATTAGGAACATTATGCGTCAGCAGTAACACATATGGTTCTAACGTCATCGGATGCGTATGTAGAGAAAATTGTGTCTCTGTTTTTTTGCTCACATTAAGACAGGGATGGGAAACCACGTTTGTGATCCCGCCCACATCTAAATGTGATCTCTACATTGTAGA More
CDS seq		ATGTCGTCGTCCACCAAGAGGCTGGTTCGTCCTCACCATCTCGCGAAACCATTGCTTACCATGCTGCACATCCTCCTGCAAGTCCAGGCCATCGCCGCGCTCACCGACGATGCGACGGCACCGGTAATTCAGTGCCTCCCGGACCAGGCCTCCGCGCTGCTCCGGCTGAAGAACTCCTTCAACAAGACGGCGGGCGGCTACTCCACTGCATTTCGGTCGTGGATCACCGGCACAGATTGCTGCCACTGGGACGGCGTCGACTGCGGTGGCGGCGAAGATGGCCGTGTCACCTCGCTCGTCTTGGGTGGCCACAACCTGCAAGCCGGCAGCATCAGCCCTGCACTCTTCAGGTTAACCTCACTCAGGTACCTTGACATCTCTGGTAACAACTTCAGCATGTCCCAGCTCCCGGTAACCGGGTTCGAGAATCTCACCGAGCTCACCCATCTTGACCTCTCTGACACCAACATCGCCGGTGAGGTGCCGGCTGGCATCGGAAGCCTTGTGAACTTGGTGTACCTTGACCTCTCCACAAGCTTCTACATCATTTATTATGATGACGAGAACAAGATGATGCCGTTCGCTTCAGACAACTTCTGGCAGCTCTCAGTGCCAAACATGGAGACCTTGCTGGCAAACCTTACCAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCGGCAACGGCGAACGGTGGTGTGACGACATAGCTAAGTTTACACCTAAGCTTCAGGTTCTAAGTTTACCTTACTGCTCATTGTCAGGTCCCATCTGCACATCCTTGTCTTCCATGAATTCGCTCACTAGGATTGAGCTTCATTACAACCACTTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAACTGTCCAAAAACAAGTTTGAAGGATTGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGGTAACAATTAACATCACTAATAATCCTGGGTTATCAGGTAGTCTGCCCAATTTCTCACAGGACAGTAAGTTAGAGAATCTTCTTATCAGTAGCACGAACTTCACAGGTATAATACCGAGTTCCATAAGCAATCTCAAATCTCTTACGAAGCTGGACCTTGGTGCCAGTGGCTTCTCTGGAATGCTGCCCTCTTCACTAGGTAGCCTCAAATACCTGGATTTGCTAGAAGTGTCTGGGATACAGCTAACAGGATCCATGGCACCGTGGATATCAAACCTAACTTCTCTTACTGTTCTCAAGTTCTCTGACTGTGGATTGTCTGGAGAGATACCTTCCTCAATAGGAAACTTAAAGAAATTGAGTATGTTAGCATTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTTAATTTGACTCAGTTGCAATCTCTGCAACTCCATTCGAACAATTTGGCTGGCACGGTGGAACTCACGTCATTCACAAAACTGAAAAACCTATCTGTCCTGAATCTCTCAAACAATAAACTACTTGTGCTACATGGAGAAAACAGTTCATCGTTGGTGCCCTTCCCAAAAATAAAACTCTTAAGGTTAGCATCTTGCAGTATATCAACCTTTCCCAACATCTTGAAGCATCTCCATGAGATCACCACTCTTGACCTTTCGCATAACAAAATCCAGGGAGCTATACCTCAGTGGGCATGGGAGACATGGAGAGGCATGTACTTTCTCCTCCTGAACATATCACACAATAACATTACAAGTCTTGGATCAGATCCTCTGCTTCCTCTTGAGATTGACTTCTTTGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTGTACCACAAGAAGGTAGTACCATGTTAGATTATTCAAGCAACCAGTTCTCCTCCATGCCTCTTCATTACTCAACTTACCTTGGTGAAACTTTTACTTTCAAGGCTTCCAAAAACAAACTGTCTGGAAATATTCCATCAATCTGTAGTGCTCCGAGACTACAACTCATTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCTTGTTTAATGGAGGATGTCACTGCATTACAAATATTAAATCTGAAGGAAAATAAACTTGTTGGAACAATACCAGATAACATCAAGGAAGGTTGTGCACTTGAGGCAATAGATTTAAGTGGCAATTTGTTTGAGGGGAGGATACCCAGATCTCTAGTTGCTTGCAGGAACTTGGAGATCCTCGACATTGGAAACAATGAGATTAGTGACTCCTTCCCATGTTGGATGAGCAAACTTCCTAAACTTCAAGTCCTTGCCCTCAAGTCTAACAAGTTCACTGGACAAATAATGGATCCTTCATATACAGTTGATGGAAACAGTTGTGAATTTACAGAGCTCAGAATTGCCGATATGGCCTCAAATAACTTCAATGGAACATTGCCAGAAGCATGGTTTACGATGCTCAAGTCCATGAATGCCATATCTGATAATGATACATTAGTCATGGAAAATCAATATTACCATGGGCAAACATACCAGTTTACTGCTGCAGTTACATACAAAGGGAATTACATCACAATTTCCAAGATCTTGAGGACCCTTGTGCTGATTGATTTCTCGAATAATGCATTCCATGGCACCATTCCTGAGACTATCGGGGAGCTTGTTCTGCTTCATGGGCTCAACATGTCTCACAATTCACTAACAGGACCAATTCCAACTCAGTTTGGCAGGCTGAATCAACTTGAGTCACTGGACCTCTCCTCAAATGAGCTCTTTGGTGAAATTCCCAAGGAGCTAGCATCACTCAACTTCCTTTCAATACTGAATTTGTCTTATAACACGTTGGTTGGAAGAATACCAAATTCATATCAGTTTTCCACATTTTCGAACAACTCTTTTCTTGGAAACACTGGTTTGTGTGGACCGCCATTATCTAAACAATGTGATAACCCACAAGAGTCAACTGTGATGCCATATGTTTCGGAGAAATCCATAGATGTTCTACTAGTCCTCTTCACTGCATTGGGTTTTGGTGTTTCCTTTGCAATTACAATCCTAATTGTATGGGGAAGGCATATGAAAAAACAGCGATGA More
Protein seq		MSSSTKRLVRPHHLAKPLLTMLHILLQVQAIAALTDDATAPVIQCLPDQASALLRLKNSFNKTAGGYSTAFRSWITGTDCCHWDGVDCGGGEDGRVTSLVLGGHNLQAGSISPALFRLTSLRYLDISGNNFSMSQLPVTGFENLTELTHLDLSDTNIAGEVPAGIGSLVNLVYLDLSTSFYIIYYDDENKMMPFASDNFWQLSVPNMETLLANLTNLEELHMGMVDMSGNGERWCDDIAKFTPKLQVLSLPYCSLSGPICTSLSSMNSLTRIELHYNHLSGSVPEFLAGFSNLTVLQLSKNKFEGLFPPIIFQHKKLVTINITNNPGLSGSLPNFSQDSKLENLLISSTNFTGIIPSSISNLKSLTKLDLGASGFSGMLPSSLGSLKYLDLLEVSGIQLTGSMAPWISNLTSLTVLKFSDCGLSGEIPSSIGNLKKLSMLALYNCKFSGKVPPQIFNLTQLQSLQLHSNNLAGTVELTSFTKLKNLSVLNLSNNKLLVLHGENSSSLVPFPKIKLLRLASCSISTFPNILKHLHEITTLDLSHNKIQGAIPQWAWETWRGMYFLLLNISHNNITSLGSDPLLPLEIDFFDLSFNSIEGPIPVPQEGSTMLDYSSNQFSSMPLHYSTYLGETFTFKASKNKLSGNIPSICSAPRLQLIDLSYNNLSGSIPSCLMEDVTALQILNLKENKLVGTIPDNIKEGCALEAIDLSGNLFEGRIPRSLVACRNLEILDIGNNEISDSFPCWMSKLPKLQVLALKSNKFTGQIMDPSYTVDGNSCEFTELRIADMASNNFNGTLPEAWFTMLKSMNAISDNDTLVMENQYYHGQTYQFTAAVTYKGNYITISKILRTLVLIDFSNNAFHGTIPETIGELVLLHGLNMSHNSLTGPIPTQFGRLNQLESLDLSSNELFGEIPKELASLNFLSILNLSYNTLVGRIPNSYQFSTFSNNSFLGNTGLCGPPLSKQCDNPQESTVMPYVSEKSIDVLLVLFTALGFGVSFAITILIVWGRHMKKQR
Function		Receptor-like protein 19 [UniProtKB/Swiss-Prot:Q9ZUK3]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os12g11370	LOC_Os12g11370.1	Chr12	6138570	6142158	-	MSU_osa1r7
CDS seq	ATGTCGTCGTCCACCAAGAGGCTGGTTCGTCCTCACCATCTCGCGAAACCATTGCTTACCATGCTGCACATCCTCCTGCAAGTCCAGGCCATCGCCGCGCTCACCGACGATGCGACGGCACCGGTAATTCAGTGCCTCCCGGACCAGGCCTCCGCGCTGCTCCGGCTGAAGAACTCCTTCAACAAGACGGCGGGCGGCTACTCCACTGCATTTCGGTCGTGGATCACCGGCACAGATTGCTGCCACTGGGACGGCGTCGACTGCGGTGGCGGCGAAGATGGCCGTGTCACCTCGCTCGTCTTGGGTGGCCACAACCTGCAAGCCGGCAGCATCAGCCCTGCACTCTTCAGGTTAACCTCACTCAGGTACCTTGACATCTCTGGTAACAACTTCAGCATGTCCCAGCTCCCGGTAACCGGGTTCGAGAATCTCACCGAGCTCACCCATCTTGACCTCTCTGACACCAACATCGCCGGTGAGGTGCCGGCTGGCATCGGAAGCCTTGTGAACTTGGTGTACCTTGACCTCTCCACAAGCTTCTACATCATTTATTATGATGACGAGAACAAGATGATGCCGTTCGCTTCAGACAACTTCTGGCAGCTCTCAGTGCCAAACATGGAGACCTTGCTGGCAAACCTTACCAACCTGGAGGAGCTCCATATGGGAATGGTGGATATGTCCGGCAACGGCGAACGGTGGTGTGACGACATAGCTAAGTTTACACCTAAGCTTCAGGTTCTAAGTTTACCTTACTGCTCATTGTCAGGTCCCATCTGCACATCCTTGTCTTCCATGAATTCGCTCACTAGGATTGAGCTTCATTACAACCACTTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAACTGTCCAAAAACAAGTTTGAAGGATTGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGGTAACAATTAACATCACTAATAATCCTGGGTTATCAGGTAGTCTGCCCAATTTCTCACAGGACAGTAAGTTAGAGAATCTTCTTATCAGTAGCACGAACTTCACAGGTATAATACCGAGTTCCATAAGCAATCTCAAATCTCTTACGAAGCTGGACCTTGGTGCCAGTGGCTTCTCTGGAATGCTGCCCTCTTCACTAGGTAGCCTCAAATACCTGGATTTGCTAGAAGTGTCTGGGATACAGCTAACAGGATCCATGGCACCGTGGATATCAAACCTAACTTCTCTTACTGTTCTCAAGTTCTCTGACTGTGGATTGTCTGGAGAGATACCTTCCTCAATAGGAAACTTAAAGAAATTGAGTATGTTAGCATTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTTAATTTGACTCAGTTGCAATCTCTGCAACTCCATTCGAACAATTTGGCTGGCACGGTGGAACTCACGTCATTCACAAAACTGAAAAACCTATCTGTCCTGAATCTCTCAAACAATAAACTACTTGTGCTACATGGAGAAAACAGTTCATCGTTGGTGCCCTTCCCAAAAATAAAACTCTTAAGGTTAGCATCTTGCAGTATATCAACCTTTCCCAACATCTTGAAGCATCTCCATGAGATCACCACTCTTGACCTTTCGCATAACAAAATCCAGGGAGCTATACCTCAGTGGGCATGGGAGACATGGAGAGGCATGTACTTTCTCCTCCTGAACATATCACACAATAACATTACAAGTCTTGGATCAGATCCTCTGCTTCCTCTTGAGATTGACTTCTTTGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTGTACCACAAGAAGGTAGTACCATGTTAGATTATTCAAGCAACCAGTTCTCCTCCATGCCTCTTCATTACTCAACTTACCTTGGTGAAACTTTTACTTTCAAGGCTTCCAAAAACAAACTGTCTGGAAATATTCCATCAATCTGTAGTGCTCCGAGACTACAACTCATTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCTTGTTTAATGGAGGATGTCACTGCATTACAAATATTAAATCTGAAGGAAAATAAACTTGTTGGAACAATACCAGATAACATCAAGGAAGGTTGTGCACTTGAGGCAATAGATTTAAGTGGCAATTTGTTTGAGGGGAGGATACCCAGATCTCTAGTTGCTTGCAGGAACTTGGAGATCCTCGACATTGGAAACAATGAGATTAGTGACTCCTTCCCATGTTGGATGAGCAAACTTCCTAAACTTCAAGTCCTTGCCCTCAAGTCTAACAAGTTCACTGGACAAATAATGGATCCTTCATATACAGTTGATGGAAACAGTTGTGAATTTACAGAGCTCAGAATTGCCGATATGGCCTCAAATAACTTCAATGGAACATTGCCAGAAGCATGGTTTACGATGCTCAAGTCCATGAATGCCATATCTGATAATGATACATTAGTCATGGAAAATCAATATTACCATGGGCAAACATACCAGTTTACTGCTGCAGTTACATACAAAGGGAATTACATCACAATTTCCAAGATCTTGAGGACCCTTGTGCTGATTGATTTCTCGAATAATGCATTCCATGGCACCATTCCTGAGACTATCGGGGAGCTTGTTCTGCTTCATGGGCTCAACATGTCTCACAATTCACTAACAGGACCAATTCCAACTCAGTTTGGCAGGCTGAATCAACTTGAGTCACTGGACCTCTCCTCAAATGAGCTCTTTGGTGAAATTCCCAAGGAGCTAGCATCACTCAACTTCCTTTCAATACTGAATTTGTCTTATAACACGTTGGTTGGAAGAATACCAAATTCATATCAGTTTTCCACATTTTCGAACAACTCTTTTCTTGGAAACACTGGTTTGTGTGGACCGCCATTATCTAAACAATGTGATAACCCACAAGAGTCAACTGTGATGCCATATGTTTCGGAGAAATCCATAGATGTTCTACTAGTCCTCTTCACTGCATTGGGTTTTGGTGTTTCCTTTGCAATTACAATCCTAATTGTATGGGGAAGGCATATGAAAAAACAGCGATGA More
Protein seq	MSSSTKRLVRPHHLAKPLLTMLHILLQVQAIAALTDDATAPVIQCLPDQASALLRLKNSFNKTAGGYSTAFRSWITGTDCCHWDGVDCGGGEDGRVTSLVLGGHNLQAGSISPALFRLTSLRYLDISGNNFSMSQLPVTGFENLTELTHLDLSDTNIAGEVPAGIGSLVNLVYLDLSTSFYIIYYDDENKMMPFASDNFWQLSVPNMETLLANLTNLEELHMGMVDMSGNGERWCDDIAKFTPKLQVLSLPYCSLSGPICTSLSSMNSLTRIELHYNHLSGSVPEFLAGFSNLTVLQLSKNKFEGLFPPIIFQHKKLVTINITNNPGLSGSLPNFSQDSKLENLLISSTNFTGIIPSSISNLKSLTKLDLGASGFSGMLPSSLGSLKYLDLLEVSGIQLTGSMAPWISNLTSLTVLKFSDCGLSGEIPSSIGNLKKLSMLALYNCKFSGKVPPQIFNLTQLQSLQLHSNNLAGTVELTSFTKLKNLSVLNLSNNKLLVLHGENSSSLVPFPKIKLLRLASCSISTFPNILKHLHEITTLDLSHNKIQGAIPQWAWETWRGMYFLLLNISHNNITSLGSDPLLPLEIDFFDLSFNSIEGPIPVPQEGSTMLDYSSNQFSSMPLHYSTYLGETFTFKASKNKLSGNIPSICSAPRLQLIDLSYNNLSGSIPSCLMEDVTALQILNLKENKLVGTIPDNIKEGCALEAIDLSGNLFEGRIPRSLVACRNLEILDIGNNEISDSFPCWMSKLPKLQVLALKSNKFTGQIMDPSYTVDGNSCEFTELRIADMASNNFNGTLPEAWFTMLKSMNAISDNDTLVMENQYYHGQTYQFTAAVTYKGNYITISKILRTLVLIDFSNNAFHGTIPETIGELVLLHGLNMSHNSLTGPIPTQFGRLNQLESLDLSSNELFGEIPKELASLNFLSILNLSYNTLVGRIPNSYQFSTFSNNSFLGNTGLCGPPLSKQCDNPQESTVMPYVSEKSIDVLLVLFTALGFGVSFAITILIVWGRHMKKQR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.598032	0.140762	0.256654

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_12g0215950	RBH	1.611026	0.375488	1.967587
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os12g11500	RBH	0.152074	0.081809	0.255509
Nipponbare \| IRGSP 1.0 \| RAP-db	Os12g0215950	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_12g0007600	SBH	0.0	1.765903	1.617414
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_12g0007690	SBH	0.000000	0.000000	0.236293
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_12g0007170	SBH	1.891639	0.527976	1.866642
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_12g0006980	RBH	0.0	0.097104	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_12g0006860	SBH	0.312480	0.0	2.086854
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_12G0088300	RBH	0.2047285	0.0990915	0.21415
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_12g0006840	SBH	0.057955	0.048037	0.092277
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_12G0093700	RBH	0.4026075	0.4914615	3.262918
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_12g0006670	SBH	0.051297	0.075113	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_12g0007010	SBH	0.054627	0.0	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_12g0006860	SBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_12g0006900	SBH	0.054838	0.0	0.137891
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_12g0006760	RBH	0.0	0.412543	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_12G006800	SBH	0.000000	0.0	0.313244
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_12g0006860	SBH	0.140919	1.183899	0.937963

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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