Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g02430 | OGI:12002730 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:812339-812716 | ||||||||
| Gene Symbol | MYB11, OsMyb11, Myb11, OsMYB60, MYB60 | ||||||||||
| DNA seq | ATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCACTGGATGAACTACCTCAGCCCCGACCTCAAGTACAGCAACTTCACCGACGACGACGACGAGCTCACCATCAAGCTCCACGCCCTTCTCGGCAACAAGTAAGCAAAACAAATTTCAACGTGTTGTCATCTGCTCCGGTTAGCTCTTCTTGTGTTCTTGGTGCTGATTGATTGGTTCTGTAGGTGGAACACGCACATCAAGCGCAAGCTCATGAGCCAGGGCATCGATCCGCAGACGCATCAGCCAGTTAGCGCCGGGACCAGCGTTGCCGCGGCAAGTGAGCTGATCACGACGGCCAGCACTGTCGGCTTCCCATCCCTGCAGGCGCCGGCGCCGGCGTGA |
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| CDS seq | ATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCACTGGATGAACTACCTCAGCCCCGACCTCAAGTACAGCAACTTCACCGACGACGACGACGAGCTCACCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGAACACGCACATCAAGCGCAAGCTCATGAGCCAGGGCATCGATCCGCAGACGCATCAGCCAGTTAGCGCCGGGACCAGCGTTGCCGCGGCAAGTGAGCTGATCACGACGGCCAGCACTGTCGGCTTCCCATCCCTGCAGGCGCCGGCGCCGGCGTGA |
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| Protein seq | MGLLRCRKSCCLHWMNYLSPDLKYSNFTDDDDELTIKLHALLGNKWNTHIKRKLMSQGIDPQTHQPVSAGTSVAAASELITTASTVGFPSLQAPAPA |
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| Function | Transcription repressor MYB6 [UniProtKB/Swiss-Prot:Q38851] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g02430 | LOC_Os12g02430.1 | Chr12 | 812339 | 812716 | + | MSU_osa1r7 | ||
| CDS seq | ATGGGGCTGCTCCGCTGCCGAAAGAGCTGCTGCCTCCACTGGATGAACTACCTCAGCCCCGACCTCAAGTACAGCAACTTCACCGACGACGACGACGAGCTCACCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGAACACGCACATCAAGCGCAAGCTCATGAGCCAGGGCATCGATCCGCAGACGCATCAGCCAGTTAGCGCCGGGACCAGCGTTGCCGCGGCAAGTGAGCTGATCACGACGGCCAGCACTGTCGGCTTCCCATCCCTGCAGGCGCCGGCGCCGGCGTGA
More
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| Protein seq | MGLLRCRKSCCLHWMNYLSPDLKYSNFTDDDDELTIKLHALLGNKWNTHIKRKLMSQGIDPQTHQPVSAGTSVAAASELITTASTVGFPSLQAPAPA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0125000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03440 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0125000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0001030 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0001240 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001250 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0001070 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0001360 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0015200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0001340 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0015500 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0001060 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001400 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0001370 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0001180 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002130 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002040 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002260 | RBH | 0.0 | 0.0 | 0.0 |
