Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
LOC_Os08g07940 | OGI:08011380 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr08:4474830-4485343 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGGAGGCTGCTATTGTGAGCGTTTCCACGGGGGTGATGAAACCCCTCCTTTCCAAGCTCTCCAAGCAGCTGGAGGAAGAGTATACCAAGCTCAAGGGAGTACGCGTGCACAAGAAGATTATGTTCATAAGAGATGAGTTGAGTACCATGAGAGCTGCACTCCAAATGTTGGCGGATTCAGAAGAGCTCAACCCTCGAATGAAAGATTGGAGGGACAAGGTGCGTGAGCTAGCCTACGACATGGAGGATTGCATTGATGCCTTCACGTCTCGCGTTGATCACAACAACGATGGATCGACCGGGTTCAAGGAGTTCTTTCACAAGTTCAAGAAACTAAAAGCTCGCCATAAGATTGCCAATGAGATCGAAGAACTCAAGACCCGCGTGATGGAGGTAAGCGAGAGGCACAAGAGGTATGATTTTGTGAATCAGGAGCTGACCAAATCTAGTTCTTTTGCCATTGATCCTCGACTGCATGCACTTTATGTGGAGGTTGACAGACTTGTGGGTATCGAGGGTCCAACAAAGCATATTATTGACAAGTTAATAACCAATGAGGATGAGGATTCCTACAGACAACTTAAAGTGGTGTCAATTGTTGGTTTTGGAGGTCTTGGTAAGACTACTCTTGCAAACCAAGTGTACCATGCCCTCAGAAGCCAATTTTTGTGCTCGGCTTTCATTTCAGTTTCTCGAAAGCCCAATCTGGAAAAGGTTCTAAGAAAGATTGCTCAAGGAGTGACGTTACCCACTGGAAAAATACCGGATGGCGATATCCACCAATTGGTTGATAAACTCAGAACGTACATCCAAGATAAAAGGTTAGTTTATTTCTTAAAAAAATCAAAATGTTAGCAGAACATATACTTAATCCTGTAGCTTATTCCTATAACATTAGCATTTACATGCATATTTTGTGTTACGAGAGAGATGAGATTGGAATTAGGAATTTTAGTGTATAGATTGATTTAGGCAAAGACCATATATAAAGTGCATACAAAGAATGTGAAAAGACTGTCCACTACACATATATCCTTAACACCGTCACTCAAATGCAACGTCTATGTAATAACGTTGCATTTGGAAATTACAACTAAACACTAGGATAGTCCAAACGCAATGCTTGAAGATGTTGTCGAAGTGTGCAACTCTTGAATGATGATGAAGATGAAAATCCATCCCCTCCTCAATGAAGAGGACCTTTTTTTAGATAATAATGAAGAGGACCTTGGAGCCTTCGCAAACTCTTCTTCAGCCCCTTTGGTACTTTAAATCCTTCACGAATTCGTTCTTCAGCCATCCACTAATTCGGAGATATGGATATGATGATGAAGAGGATGAAGGCCCTTCACAAACTGTTCTTCGAACCTTCATAGATTTAGAAATGTTGATGGTTATGATGACGGACCTTCACAAACTGTTATTCGATCCTTGACTAATGATGATGGCCAGCTCAACATGGAACTAGTGAACTGATGATTGAGCTTCGACAGGATGTTGATGATGATGGTTAACTCCGATGGGAGTTGATGATGATGAGGCTAGCTTTGACATGAAGCTAGTGAAGAGAGAAAGAGAGGCTAGAGTAGAATGACTTCGACGAATTGATGATAGGCAATAGACTTTGGGGTGGACTTAATGGATAACAAATGAGTTAAAGTAGTAGTAAATGACGCTAGCATGAAAGGTGGATACTGGACATATATGGAAGAACAGTTGATGCGGATGGACCAAATGCAATATCAGTTAGATGGACATGGACATGGAGCTGTATGCCTTGGTTTTCAGTTGCCTGACCCAAGCAGAAACACAATGATACAATAGGAAAAGACCTATGGATATTAGTAGACAGTATGCAGCATCGGCTGATTTAGTGTTTTTCTGCAGGACATGGTAGTAGCAATGTAGATATTATATCAAGAAATATAGGCCCTGTTTAAATCCCACATAAAAATTTTACACCTTGTCACATCAAACGTTTAAACGTCTGCATGAAGTATTAAATATAGTCTAAAAATAACTAATTGCACAGATTGCGACTAATTTGCGAGGCGAATCTTTTGAACCTAATTGCTCAATGATTTGACAATGTGGAGCTACAATAAACATTTGCTAATAACGGATTAATTAGGCTTAATAAATTCGTCTCGCAGTTTACTGACGGATTCTGTAATTAGTTTTTTTATTAGTGCCCGAGCACCCCATGCGACACCCTACGTAATATCCGATGTGACACGCTAAAACTTTACACACCCCTGATGTAAACACCCCGTACTATATATAGCAGCACCAAGCAGTGGACAATAGCAAAACATGTGCTAGATGGCAGCAAACAACTAGCATAACAATCAGTTGCAAGAAGAATATTGGTGCTTGAACATGAACTGAACAGCACTACGTGTGGTTGCTGCTTGATGAGGATTAGAACAAAGGATTGCTGCTGCTGCTGCAGATTGAGGAGCAGAGGCTTGATTTGAGCCTAAACTCAACAGATCTGAAGAGGAAGAAGAAAAATGAGCAGATAAACCTTTGCTTTGCTGTTGGTTGTTGCTATTGGTTTGCTGCTTGAAGATGAAAGACGACAAGGCATATGCTGCTACAGTGCTACTGCTATCTCAATGGGAGGTCAAAAAGAGGGCTGCTGCTTGTTGGTGGTTTTGCTGCCTAAAGATGGGCAACCAGATGAGACCGACGACTAGAGAAGACACCAGATCTGGCGCCCTGCCGGCCGGCGGCGGTGACGGCCGAAGCTCAAGATCCCGGCGACGACCTGGACAGGCCGCCGCGACGAGCGGGCGACGACGATTGTGGCGTTGACGAGAACCAGGAAGGGCGGCGAGGACGACGGGTGGCGACGATTAGCGACGGCTGCGGATGACGAGGCAGCTCGCGGTGGATTTTTTTTTATTATTTTTTTTTAGAGAAGGGTATTTTTTACCCGGCCTCTATATCCAACCAGATATATACGGCCATTGAAATAGGGAACTTAACCCTGCAAACAACCCAATCTGAAATTCGCTCCATAGGAGATTTGAACTCAGAACCTTGGGGTACTACTCAGGTCACTGTAACCACTAGACTCACGGTGGATGACGGCCTGCGGCGGGGGACGAGGGGTCTGAACCGTTGATCCTCCGCGACCATCTCCAGCATCATCTCCAGCACCTCCATCGGCCTCCCCTGCATCGATCCCCTATCACCGCCAGTGAAGAAGGTGGCCTCCAACACCGACACACCGTCGTACACCATGACTTCAGTATCGTCGCACCGTCGAAGCCGTCACGCCCGCCCACGAGTAGAAGCACTGCTAAAAATCCCTAGCCTCGAGCAGCCGCCACCTCCACATCTGACGCAGCAGCACGGTCGCTACCCAGCCCTGCCGTCGCCGCCGTCGTAAATATCTCCGCCTCAGGCCTCCATCGCCCCCACCCCTTCCTCCTCCCGGTCATCTGCTCGCCTAGGAATGCAAGCGGGCTGACCCACGAGTTTACTTATAGGTCAAATAAATGATAAATCATGGGTTTTCGCGTCGTGGTCCGGTTTACCGCATATAGATATGTAAGTGGGTCGATCTATAAACCCATTTATAGGTCAAATTAATAGGTAACCCGCTGGTCTAGTTTGCATACTAATTTTGCCTATAAGCGGGTTCGTGGATAAGCCCACTTGCACCCCTAGCTCCGCCCATCTCGCCTCGCTTCTCGCCCTCGACTTGGGCAGCAGCGGGACAATCGGCATGAGATCCACCCGTGGCCGCAGCGGCAGGGCATAACGACAGCGAGCATCGCCGCTGCCTCCCGCTCGCCGCCTGCTCTTGAGCGCCGGAGTGAGAGAAGAAGGGATGAGCAATGGCAATGTGAAGAGAGCGGCGCTGCTAGTGAGATGGGAGACGAGGTGGTAGAGGGGCCGGTGAGGGAGGGCTCGGCTATAGCCGTTGCATGGCTCGGGGAAAGGGGAGAAAAGAGGAGGAAGGAGAAGGAAGGGTATTCAAGGCCGATATACGGGTCCCGTTGTCATAGACTCATAATGAAGAGTCTGAAGAGTCTGTTGGAGTCTGTCCCGGGTCTTGCCGTCGTACTTGTCGATGCCCATCGTCTTGAAGTTAGATGGCCATTATACTCCGCGGAGTGGCTTGGTGAAGGCTGGGATCCCTTTGAACAGGTCGTCGCGACAGCGTCTTAGCTCCGGGGAGAGGTCGATGTATTCGTGGAGTGGACGATGAACGACGATGCAGCCGTTTGGCCTGGTCTTGGCGCGTCGCGGCCCCCCTTCATCTTCGATGTTGTGGATGCGTAGCCGTTCCGCCTCCCGTAGTCGGCGTCATTCGTTCATGATGTTGCGCAGGTCGGCGTTGAGACGCTGGTTGGATGTTGAGATGCTGGTTGGATTCGATCCTATCTCGCAGATTGCTCGGACGAAGGCTTGGATGAGAGCTCCCCGCTTGCAAGGGTTGGCGGAGATCCGTGGGCGGACAAGATGGCTATTTAGACGTCGATGCGCCGGTTGTGGATATGGTAGGGGCGTCGCCATGTGCTAGACGGTAGCGGCTTCGACCATTGCCTTGATTTGCCCGATCGTGGAGTTAATTGCCGAGTCTTCAGGGAACTTAATGTTGTCAAGTAGCGCCTTGGTCGCCACGATGTTGTGCTGAGGGGTCATGAAGACGTCGTGTTCGCCTAGCTTGGCCTTGAGAATGGCTTCCTGAGTCGCTCGGCCGTGCTATCGTAGCTCCTCCATGCGCTTTGTGAGCTCTTCTTGCTGTTGCCTGATGCGTCGTTCTTCTTCTCCGCGCTCCTGTCGCTCGGCGTCAGTCTCCGACTGAAGTATCATGAAGATGTCACTCGGCTTGTGACTGGAAGTTGGTGTTGTTGGAGCTCTCTTCCACCGCGAGTAAGGGAGGCACGCGGACGTGTCGAGGAATCCGACCCATCGGGACCCGAGCTCCCGAGGCAGTCAGGGTCGGCGATGCTTGGATCGGCCGTGATGCCCGGGTCGCCTTGGTGGAGTTGTGGTGACCCTGCCGCGAGCGGAGAAGTTGTCGACGTGGCCAATCTTGGCGGCGACGGCAGTGAAATTGGCAAGGCCAAAAGGCACTAGGGACGTCGCGGCTGGGGATGAAGCACGGGGAGTCATGGGTCGGAGTACGCCGGCCTTGTTGGTAGTGAAGTTCAGTTCTCCAAAACGAAACCTGGCTCCTGCAGGGAATCGAATGTCTTGGATAGAAACGACCACGCCGGGGCTGACTTGCTGAATTTGGCCGGAGGCGTCGAAGACGAAGTCGAAGGTGCCAAAGGAGAACATGGTGGTGGTGGGGAAGGTGGTGGGATTCACGAAGGTGATTCCCTAAGATGCCATCTCCTCCTTGAAAAAAAAAGAAAATCAAGCGCACCCCTACCTGGCGCGCCAACCGTCGATTTATATAATCGACAATATAATTTATCGGGTACGCAAGATCAAGGAGAGATGGTGGCACAGATGTTTATACTGGTTTAGGCTCTTGATGTGAGGTAATACCCTAGTCTAGTTGTATGTAAATTGAAGGTAATACCTAGTCCAGTTGTATGCAAATTGGATTTGTGTAGATATGCGCAGCACGGCATTGGAATAGCACATGGGCACATATGTTGGAGTATGGCACTAGTTGTGGCCATCATCCCCAATCTCTGGACCCCTACCCCTCTTATATAGGATGTGGGGGGAGGGTTACAAGGAAGTATCTAGTTGATTGCAACTAGATCTCTCTATTCTCATCTATAAAAGATATGCATGATCCCCGTGATTTATTTCTTATCCCAGGAATATCTTTTACTTAATTTACAAGATAGCCACATGGTTCTAGGGCTCTTGGCTCACCCAATGTCTCATGGCCCAAAGGCTTCTTCACGGGTACCAAGGTATCATATACCCCACAGGCTTGTTTGGTTCGCGTCCTGAGGCTTGTATGCCTGGCCGGAGCGCTGCCTGAGCTCCAACAACTACATGTTTGGTTTGTTCCCTGGTGTATCCTAGATTTTTTCAGCCTTTTTTATGTTTTAATTTTATTAATAGACCATTTCTAAAAGTATTTTCAAATTTGAACCTTTTGGCCACGCCAGCCCGCCTGGCGTGGCGAAATAACTCTATCACGCCACGTGTAGCTGGCGTGGCAGCGTTGTCCTGCCACTCCAAAAGGTTTAATTTTCAGAAATATTTTTTGGAAAGGTCTATTAATAAAATTAAAACATTAAAAAGTCTAAAAAATAAAAAAAATCTGTATCCTGAGCTAGCCTGACCTGACTCTTCATTAGCATGCTAAATCCTCAGGCGACTTTATTAGCTTGAACCAGGCCATCGAATTTGGACGCCTGAGCTTCAGGCAACTACTCTTAATGATGCATGTGTCATTTATTTCATGAGCAATTCTACAGTCCTTGAGGAGGTACCATATGGTACCAAAAATTTAGTGTAAAATTTGGTACCTCATGGTACGTACCTCATAATACCTTGGTACCATGAGGTACCATTTTTTCTATTGTAAATTTGGTACCTCCTCAAGGACTATAAAATTGCTCGTATTTCATACTTTGCGTTGGTAAAAGTTGCTTTTTGACATTTTATTATTCTTCAGGGCTTGTGCACGATCCAAACACACAAAGTGTTGCTTCTCCCAAGTCCCAACGCTGCCTGTCCGGCGTGAGTTTTTTCTCAGGCATGACCCTCAAGACACAAACCAAACAGCCCTTAAGTAACTAGTATGCCTAGTCAAATCAGATAGAGAGTTGGTTATATGTGTGTTTGGAGAGTTCGATTTGGATAGTCTGTTAGAGAAGCTCTAATATACATACAAGGATGTGAAAAGACTAAATTGTCCGCTACATATATATCCTTAACATTTTGAACCAAAATAGATGGGAAAACCAATCTTCATTTAAAGTTTGACCAAATGCATATTCAAAATGACAAATATTTATTTAATGAGACCCACTGCACTTCATGTTACCTATGAACAAAGAATTTTCACATCATATGTTTTGGGCGCCAATTGAATAATTCTTTGTCAAAATCATGTCTCAGGTACTTTATTGTAATTGATGACTTATGGGGCACGGAAGAATGGAAATCTATCCGTCTTGCTCTGTTCAATAATAAGTGTGGTAGCAGAATTATCACCACAACACGTAGTGCTGCAGTTGCATCATTTTCCTGTTGTGATGGCGGTTACGTTTACCTAATGGAACCACTTAACTTTGCAGACTCCAAAAGGTTGTTTTTAAAAAGAGCATTCGGTTCTGAAGAATTATTGTATCCTCATCTTGAAGAAGTCTTTCATGGGATATTGGAGAAATGTGGTGGTCTACCATTAGCCATAAATACTATATCCAGTTTGCTGGTCGATCAACATGCAAAAGAAGAATGGGACAGGATGCTAACTGCTATTGGCTCTGCACTTGCAAAAAATCCTGATGTTGAGAATATGACAAAGATATTATCTCTCAGTTACCTGGATCTTCCTCATCATCTAAGAACTTGTTTGTTGTACTTAAGTGTATTTCCAGAAGATTATGTAATAGACAAACAACAGTTGATAAATAGATGGATTGCAGAAGAATTCATTCATGAAGAGCAAGGCCGGAGCACATACGAAGTTGGTGAGCGTTATTTCCTTGATCTCATCGACCGAAGCTTGATTCAACCTGTTGATGTAAAGTATGGTCAGGTAGAGGCATGTCGAGTTCATGACATCATTCTTGATTTCATCGCGTGCAAGGCCGCTGAAGAGAATTTTGTCACCTCATTGGATACTGCAGATTTTGGCCAAGTTTCGGATCGCAGGGTTCGTAGGCTAAGTGTCATGAATATCAGTGAAGACCATGCCACCATATCAGCAAGCCAAATCGATCTCTCTCATATTCGATCACTTACTTTATTTGGGCGTTTCATGCAAACTCCTTTGGTGGATTTACCAGCTATACGTGTGTTGGATTTAGAAGAATGTGAAAACATGGGAGACAACCATCCTATTCTTGCGAATGTAGAAACGCTGCTCCATTTGAAGTACTTGCGTATTGGAATGTTGTGTCCGATAACTGAGCTCCCAAGAAATATTGGAGAACTGCGTCATCTAGAAACACTGGACATGCGATTTGCATGTCAAGTCAAAGAATTGCCATCAACTATTACAAGGCTTCAACGATTGGCCCGCCTATATGTCCATCACAACACTAGACTCCCTGATGGGGTAATTGGAAAGATTCAGAACTTGGAAGAGCTAGAGGAGTTTGGTGTCGTCTCCTGCGAGAAAGGGAAATCTCTGCAAGAATTCGGTCAGCTACCCAAGCTGAGGACGCTGAAAGTAAGATGCAGTAGTACTACAGATGATTTGGAAGGAAGGAAGCGAGCCGAGGACCTCTGGAATTATATTGGAACTTTGATATCTTCATGCAATCTTCATCATCTTTGTATCCTCCACCGACAGGATGATCCAGATCATCTCCCAATGTCACTGGAATCATGGTGCCCCCCTAGTGATAATTGTAGCCTCCGGAAGCTCCACATCACACATTACTACATCTCTAAGCTTCCAAGTTGGATGGGTTCCCTTGCAAATCTCAAGGAATTACTACTATATTTCTACAGAATGAGGCCTGAAGATGTTGACATCCTTGAAGCAATACCTAGCTTGGTTTTACTCAGAGTAAGAACACTATACAGCAGCAATGGGAGGATCACGTTCCGTGGCAACAAAGGATTCAGATGTTTGAAATATTTCTCTCTAGATATTGACCTTTGTGGGACAGAGCTGGAGTTTGAAGCTGGGGCAATGCCAAAGATTGAGCATCTCAAGATTAATTTCCCTGTGCATTCTTGGACGGCGTCTGTGAATGGTGCTTCTGATTTTGGTATCCAGCACCTGTCCACCCTCACCGAAGTTGAGGTTGGTCTTGGTTGCTTCTTTATACCTGACACCAGAAGGATGTACCATCCGACGACGGAAGATACGGACGACAGTCCGATGGAAGATGACGGCGAAGCTAACGTTGTCAAATGTTTTGAAAGTCGCATCAAGTCTGCCGTTGAGGCACTTCCTAACCGTCCCACATGCAAATTCAACCTGAACACTGCTATTGTGCCTTGTCCATCGGTAAGTTTCCAGTCAGAATTGTAGGGATACCACAAAAATATTTGGTGCCCGTTTAATTAATGGCAAAATTTGTTCTAAGACACTTCAGATTTGTGGTATTTATTTTAGGGCACTCTAATTTTATAGCATTTGCTCTAGAATACTCTAGTTACTTTTTTTTTTTCAAAAGACTACTTTACCTTGAACCACCTTCTATAATTAAAATTTGAACACACTTTAGCTGATTCTAAACATTTTGTAAAATTTAGAAGTTGTCTGAAATTACAGAAATCAAAAATATTTTACAAAAATTTGTTTAAATTTAGACAATATTATTTAAAGTTTTAAAACTCTTTTGGAAACTTTCAATGTATTTGATTTCCGTAATTAAATTAGGGACAGGTTTTTAATTTGGGTACTTTTACCATCCTTACAATGGATAATGAGAGGTATCACTAATTATAATAACTTTAGAGATACCAAAATTAGGTACCCCCAAGTGTGAAATTTTAGTACCTTACAAGTTATAGAGAAAATTTCTTATGTGCCCCTCAAGTTCTTGCTCAATCTCTACTAGTATGTCGGGTTTTGCTACATCCTCAGTACATACCATTTCGCTTAGTTAACTACCATAAATTAATCATTTTTTTTCAAAATAAACATAATGCCCCTCATAACCATAAGCGATAAGTTTGCCCCGCACAAAAATAAATGCCCCTAAATTCCTTAGTTTTGGAAAAAAAAGAAGAGGTGGAATGAATCAAATCAAACCATATAAATATTTACTCATTTTTATAATTTTCTAAAAAAATTAAAATAATATATATATTTTCAAATAATTTCGATCAAACTAAACTTGAAACCAAAGTTTGATTTTTATTTTTTTTCAACAGAAAAAGAACAATGGGGAGGTGCATTACCCTAATCACCATTTTTTTTGTTATTTTATCCAAAATTGTAAAACTAAAACTTGAATTCTAAATGAATTTAAAATTTGGTTGAAGTTCAACCTTATGAGATAAGGGTAACATGGTCATGTTGAGAAAAAAAATGGTGGTAAACTGAGAGACATAAAAAAGGATGGAACTCGGAGGATGGGTGGGGGGGGGGGGGGGTTTATTGAGTGGAAACTGTAACAATTTTATTATCTCTTGGGCACATTTGGAAAGACCGGAAAAAAACTGAAACATTAAGTGTACTTATTTTTCAATCTTTTGCTTATATATTTTTTTCATTCTTCTTCCAGTGTTTTGAGTACAAGAGGAAACACCCGAGCTTTCCTGTAGGTTCAGTTAAAGCAGTTAGGGATGTTCGTATAAGTTCATCAGCGATTCAAGATAATTCCATGGGGCTTCGCCGCCGGCGGCCAGCAAATCAGCCGTTTCGATTCGGCTGGGCAGGGCTGCAGTATTAA
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CDS seq | ATGGAGGCTGCTATTGTGAGCGTTTCCACGGGGGTGATGAAACCCCTCCTTTCCAAGCTCTCCAAGCAGCTGGAGGAAGAGTATACCAAGCTCAAGGGAGTACGCGTGCACAAGAAGATTATGTTCATAAGAGATGAGTTGAGTACCATGAGAGCTGCACTCCAAATGTTGGCGGATTCAGAAGAGCTCAACCCTCGAATGAAAGATTGGAGGGACAAGGTGCGTGAGCTAGCCTACGACATGGAGGATTGCATTGATGCCTTCACGTCTCGCGTTGATCACAACAACGATGGATCGACCGGGTTCAAGGAGTTCTTTCACAAGTTCAAGAAACTAAAAGCTCGCCATAAGATTGCCAATGAGATCGAAGAACTCAAGACCCGCGTGATGGAGGTAAGCGAGAGGCACAAGAGGTATGATTTTGTGAATCAGGAGCTGACCAAATCTAGTTCTTTTGCCATTGATCCTCGACTGCATGCACTTTATGTGGAGGTTGACAGACTTGTGGGTATCGAGGGTCCAACAAAGCATATTATTGACAAGTTAATAACCAATGAGGATGAGGATTCCTACAGACAACTTAAAGTGGTGTCAATTGTTGGTTTTGGAGGTCTTGGTAAGACTACTCTTGCAAACCAAGTGTACCATGCCCTCAGAAGCCAATTTTTGTGCTCGGCTTTCATTTCAGTTTCTCGAAAGCCCAATCTGGAAAAGGTTCTAAGAAAGATTGCTCAAGGAGTGACGTTACCCACTGGAAAAATACCGGATGGCGATATCCACCAATTGGTTGATAAACTCAGAACGTACATCCAAGATAAAAGCCATCCACTAATTCGGAGATATGGATATGATGATGAAGAGGATGAAGGCCCTTCACAAACTGTTCTTCGAACCTTCATAGATTTAGAAATGTTGATGATTGAGGAGCAGAGGCTTGATTTGAGCCTAAACTCAACAGATCTGAAGAGGAAGAAGAAAAATGAGCAGATAAACCTTTGCTTTGCTGTTGGTTGTTGCTATTGGGAATCGAATGTCTTGGATAGAAACGACCACGCCGGGGCTGACTTGCTGAATTTGGCCGGAGGCGTCGAAGACGAAGTCGAAGGTGCCAAAGGAGAACATGGTGGTGGTGGGGAAGGTGGTGGGATTCACGAAGGGCTTGTGCACGATCCAAACACACAAAGTGTTGCTTCTCCCAAGTCCCAACGCTGCCTGTCCGGCTGTGGTAGCAGAATTATCACCACAACACGTAGTGCTGCAGTTGCATCATTTTCCTGTTGTGATGGCGGTTACGTTTACCTAATGGAACCACTTAACTTTGCAGACTCCAAAAGGTTGTTTTTAAAAAGAGCATTCGGTTCTGAAGAATTATTGTATCCTCATCTTGAAGAAGTCTTTCATGGGATATTGGAGAAATGTGGTGGTCTACCATTAGCCATAAATACTATATCCAGTTTGCTGGTCGATCAACATGCAAAAGAAGAATGGGACAGGATGCTAACTGCTATTGGCTCTGCACTTGCAAAAAATCCTGATGTTGAGAATATGACAAAGATATTATCTCTCAGTTACCTGGATCTTCCTCATCATCTAAGAACTTGTTTGTTGTACTTAAGTGTATTTCCAGAAGATTATGTAATAGACAAACAACAGTTGATAAATAGATGGATTGCAGAAGAATTCATTCATGAAGAGCAAGGCCGGAGCACATACGAAGTTGGTGAGCGTTATTTCCTTGATCTCATCGACCGAAGCTTGATTCAACCTGTTGATGTAAAGTATGGTCAGGTAGAGGCATGTCGAGTTCATGACATCATTCTTGATTTCATCGCGTGCAAGGCCGCTGAAGAGAATTTTGTCACCTCATTGGATACTGCAGATTTTGGCCAAGTTTCGGATCGCAGGGTTCGTAGGCTAAGTGTCATGAATATCAGTGAAGACCATGCCACCATATCAGCAAGCCAAATCGATCTCTCTCATATTCGATCACTTACTTTATTTGGGCGTTTCATGCAAACTCCTTTGGTGGATTTACCAGCTATACGTGTGTTGGATTTAGAAGAATGTGAAAACATGGGAGACAACCATCCTATTCTTGCGAATGTAGAAACGCTGCTCCATTTGAAGTACTTGCGTATTGGAATGTTGTGTCCGATAACTGAGCTCCCAAGAAATATTGGAGAACTGCGTCATCTAGAAACACTGGACATGCGATTTGCATGTCAAGTCAAAGAATTGCCATCAACTATTACAAGGCTTCAACGATTGGCCCGCCTATATGTCCATCACAACACTAGACTCCCTGATGGGGTAATTGGAAAGATTCAGAACTTGGAAGAGCTAGAGGAGTTTGGTGTCGTCTCCTGCGAGAAAGGGAAATCTCTGCAAGAATTCGGTCAGCTACCCAAGCTGAGGACGCTGAAAGTAAGATGCAGTAGTACTACAGATGATTTGGAAGGAAGGAAGCGAGCCGAGGACCTCTGGAATTATATTGGAACTTTGATATCTTCATGCAATCTTCATCATCTTTGTATCCTCCACCGACAGGATGATCCAGATCATCTCCCAATGTCACTGGAATCATGGTGCCCCCCTAGTGATAATTGTAGCCTCCGGAAGCTCCACATCACACATTACTACATCTCTAAGCTTCCAAGTTGGATGGGTTCCCTTGCAAATCTCAAGGAATTACTACTATATTTCTACAGAATGAGGCCTGAAGATGTTGACATCCTTGAAGCAATACCTAGCTTGGTTTTACTCAGAGTAAGAACACTATACAGCAGCAATGGGAGGATCACGTTCCGTGGCAACAAAGGATTCAGATGTTTGAAATATTTCTCTCTAGATATTGACCTTTGTGGGACAGAGCTGGAGTTTGAAGCTGGGGCAATGCCAAAGATTGAGCATCTCAAGATTAATTTCCCTGTGCATTCTTGGACGGCGTCTGTGAATGGTGCTTCTGATTTTGGTATCCAGCACCTGTCCACCCTCACCGAAGTTGAGGTTGGTCTTGGTTGCTTCTTTATACCTGACACCAGAAGGATGTACCATCCGACGACGGAAGATACGGACGACAGTCCGATGGAAGATGACGGCGAAGCTAACGTTGTCAAATGTTTTGAAAGTCGCATCAAGTCTGCCGTTGAGGCACTTCCTAACCGTCCCACATGCAAATTCAACCTGAACACTGCTATTGTGCCTTGTCCATCGAAAAAGAACAATGGGGAGTGTTTTGAGTACAAGAGGAAACACCCGAGCTTTCCTGTAGGTTCAGTTAAAGCAGTTAGGGATGTTCGTATAAGTTCATCAGCGATTCAAGATAATTCCATGGGGCTTCGCCGCCGGCGGCCAGCAAATCAGCCGTTTCGATTCGGCTGGGCAGGGCTGCAGTATTAA
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Protein seq | MEAAIVSVSTGVMKPLLSKLSKQLEEEYTKLKGVRVHKKIMFIRDELSTMRAALQMLADSEELNPRMKDWRDKVRELAYDMEDCIDAFTSRVDHNNDGSTGFKEFFHKFKKLKARHKIANEIEELKTRVMEVSERHKRYDFVNQELTKSSSFAIDPRLHALYVEVDRLVGIEGPTKHIIDKLITNEDEDSYRQLKVVSIVGFGGLGKTTLANQVYHALRSQFLCSAFISVSRKPNLEKVLRKIAQGVTLPTGKIPDGDIHQLVDKLRTYIQDKSHPLIRRYGYDDEEDEGPSQTVLRTFIDLEMLMIEEQRLDLSLNSTDLKRKKKNEQINLCFAVGCCYWESNVLDRNDHAGADLLNLAGGVEDEVEGAKGEHGGGGEGGGIHEGLVHDPNTQSVASPKSQRCLSGCGSRIITTTRSAAVASFSCCDGGYVYLMEPLNFADSKRLFLKRAFGSEELLYPHLEEVFHGILEKCGGLPLAINTISSLLVDQHAKEEWDRMLTAIGSALAKNPDVENMTKILSLSYLDLPHHLRTCLLYLSVFPEDYVIDKQQLINRWIAEEFIHEEQGRSTYEVGERYFLDLIDRSLIQPVDVKYGQVEACRVHDIILDFIACKAAEENFVTSLDTADFGQVSDRRVRRLSVMNISEDHATISASQIDLSHIRSLTLFGRFMQTPLVDLPAIRVLDLEECENMGDNHPILANVETLLHLKYLRIGMLCPITELPRNIGELRHLETLDMRFACQVKELPSTITRLQRLARLYVHHNTRLPDGVIGKIQNLEELEEFGVVSCEKGKSLQEFGQLPKLRTLKVRCSSTTDDLEGRKRAEDLWNYIGTLISSCNLHHLCILHRQDDPDHLPMSLESWCPPSDNCSLRKLHITHYYISKLPSWMGSLANLKELLLYFYRMRPEDVDILEAIPSLVLLRVRTLYSSNGRITFRGNKGFRCLKYFSLDIDLCGTELEFEAGAMPKIEHLKINFPVHSWTASVNGASDFGIQHLSTLTEVEVGLGCFFIPDTRRMYHPTTEDTDDSPMEDDGEANVVKCFESRIKSAVEALPNRPTCKFNLNTAIVPCPSKKNNGECFEYKRKHPSFPVGSVKAVRDVRISSSAIQDNSMGLRRRRPANQPFRFGWAGLQY |
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Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
LOC_Os08g07940 | LOC_Os08g07940.1 | Chr08 | 4474830 | 4485343 | + | MSU_osa1r7 | ||
CDS seq | ATGGAGGCTGCTATTGTGAGCGTTTCCACGGGGGTGATGAAACCCCTCCTTTCCAAGCTCTCCAAGCAGCTGGAGGAAGAGTATACCAAGCTCAAGGGAGTACGCGTGCACAAGAAGATTATGTTCATAAGAGATGAGTTGAGTACCATGAGAGCTGCACTCCAAATGTTGGCGGATTCAGAAGAGCTCAACCCTCGAATGAAAGATTGGAGGGACAAGGTGCGTGAGCTAGCCTACGACATGGAGGATTGCATTGATGCCTTCACGTCTCGCGTTGATCACAACAACGATGGATCGACCGGGTTCAAGGAGTTCTTTCACAAGTTCAAGAAACTAAAAGCTCGCCATAAGATTGCCAATGAGATCGAAGAACTCAAGACCCGCGTGATGGAGGTAAGCGAGAGGCACAAGAGGTATGATTTTGTGAATCAGGAGCTGACCAAATCTAGTTCTTTTGCCATTGATCCTCGACTGCATGCACTTTATGTGGAGGTTGACAGACTTGTGGGTATCGAGGGTCCAACAAAGCATATTATTGACAAGTTAATAACCAATGAGGATGAGGATTCCTACAGACAACTTAAAGTGGTGTCAATTGTTGGTTTTGGAGGTCTTGGTAAGACTACTCTTGCAAACCAAGTGTACCATGCCCTCAGAAGCCAATTTTTGTGCTCGGCTTTCATTTCAGTTTCTCGAAAGCCCAATCTGGAAAAGGTTCTAAGAAAGATTGCTCAAGGAGTGACGTTACCCACTGGAAAAATACCGGATGGCGATATCCACCAATTGGTTGATAAACTCAGAACGTACATCCAAGATAAAAGCCATCCACTAATTCGGAGATATGGATATGATGATGAAGAGGATGAAGGCCCTTCACAAACTGTTCTTCGAACCTTCATAGATTTAGAAATGTTGATGATTGAGGAGCAGAGGCTTGATTTGAGCCTAAACTCAACAGATCTGAAGAGGAAGAAGAAAAATGAGCAGATAAACCTTTGCTTTGCTGTTGGTTGTTGCTATTGGGAATCGAATGTCTTGGATAGAAACGACCACGCCGGGGCTGACTTGCTGAATTTGGCCGGAGGCGTCGAAGACGAAGTCGAAGGTGCCAAAGGAGAACATGGTGGTGGTGGGGAAGGTGGTGGGATTCACGAAGGGCTTGTGCACGATCCAAACACACAAAGTGTTGCTTCTCCCAAGTCCCAACGCTGCCTGTCCGGCTGTGGTAGCAGAATTATCACCACAACACGTAGTGCTGCAGTTGCATCATTTTCCTGTTGTGATGGCGGTTACGTTTACCTAATGGAACCACTTAACTTTGCAGACTCCAAAAGGTTGTTTTTAAAAAGAGCATTCGGTTCTGAAGAATTATTGTATCCTCATCTTGAAGAAGTCTTTCATGGGATATTGGAGAAATGTGGTGGTCTACCATTAGCCATAAATACTATATCCAGTTTGCTGGTCGATCAACATGCAAAAGAAGAATGGGACAGGATGCTAACTGCTATTGGCTCTGCACTTGCAAAAAATCCTGATGTTGAGAATATGACAAAGATATTATCTCTCAGTTACCTGGATCTTCCTCATCATCTAAGAACTTGTTTGTTGTACTTAAGTGTATTTCCAGAAGATTATGTAATAGACAAACAACAGTTGATAAATAGATGGATTGCAGAAGAATTCATTCATGAAGAGCAAGGCCGGAGCACATACGAAGTTGGTGAGCGTTATTTCCTTGATCTCATCGACCGAAGCTTGATTCAACCTGTTGATGTAAAGTATGGTCAGGTAGAGGCATGTCGAGTTCATGACATCATTCTTGATTTCATCGCGTGCAAGGCCGCTGAAGAGAATTTTGTCACCTCATTGGATACTGCAGATTTTGGCCAAGTTTCGGATCGCAGGGTTCGTAGGCTAAGTGTCATGAATATCAGTGAAGACCATGCCACCATATCAGCAAGCCAAATCGATCTCTCTCATATTCGATCACTTACTTTATTTGGGCGTTTCATGCAAACTCCTTTGGTGGATTTACCAGCTATACGTGTGTTGGATTTAGAAGAATGTGAAAACATGGGAGACAACCATCCTATTCTTGCGAATGTAGAAACGCTGCTCCATTTGAAGTACTTGCGTATTGGAATGTTGTGTCCGATAACTGAGCTCCCAAGAAATATTGGAGAACTGCGTCATCTAGAAACACTGGACATGCGATTTGCATGTCAAGTCAAAGAATTGCCATCAACTATTACAAGGCTTCAACGATTGGCCCGCCTATATGTCCATCACAACACTAGACTCCCTGATGGGGTAATTGGAAAGATTCAGAACTTGGAAGAGCTAGAGGAGTTTGGTGTCGTCTCCTGCGAGAAAGGGAAATCTCTGCAAGAATTCGGTCAGCTACCCAAGCTGAGGACGCTGAAAGTAAGATGCAGTAGTACTACAGATGATTTGGAAGGAAGGAAGCGAGCCGAGGACCTCTGGAATTATATTGGAACTTTGATATCTTCATGCAATCTTCATCATCTTTGTATCCTCCACCGACAGGATGATCCAGATCATCTCCCAATGTCACTGGAATCATGGTGCCCCCCTAGTGATAATTGTAGCCTCCGGAAGCTCCACATCACACATTACTACATCTCTAAGCTTCCAAGTTGGATGGGTTCCCTTGCAAATCTCAAGGAATTACTACTATATTTCTACAGAATGAGGCCTGAAGATGTTGACATCCTTGAAGCAATACCTAGCTTGGTTTTACTCAGAGTAAGAACACTATACAGCAGCAATGGGAGGATCACGTTCCGTGGCAACAAAGGATTCAGATGTTTGAAATATTTCTCTCTAGATATTGACCTTTGTGGGACAGAGCTGGAGTTTGAAGCTGGGGCAATGCCAAAGATTGAGCATCTCAAGATTAATTTCCCTGTGCATTCTTGGACGGCGTCTGTGAATGGTGCTTCTGATTTTGGTATCCAGCACCTGTCCACCCTCACCGAAGTTGAGGTTGGTCTTGGTTGCTTCTTTATACCTGACACCAGAAGGATGTACCATCCGACGACGGAAGATACGGACGACAGTCCGATGGAAGATGACGGCGAAGCTAACGTTGTCAAATGTTTTGAAAGTCGCATCAAGTCTGCCGTTGAGGCACTTCCTAACCGTCCCACATGCAAATTCAACCTGAACACTGCTATTGTGCCTTGTCCATCGAAAAAGAACAATGGGGAGTGTTTTGAGTACAAGAGGAAACACCCGAGCTTTCCTGTAGGTTCAGTTAAAGCAGTTAGGGATGTTCGTATAAGTTCATCAGCGATTCAAGATAATTCCATGGGGCTTCGCCGCCGGCGGCCAGCAAATCAGCCGTTTCGATTCGGCTGGGCAGGGCTGCAGTATTAA
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Protein seq | MEAAIVSVSTGVMKPLLSKLSKQLEEEYTKLKGVRVHKKIMFIRDELSTMRAALQMLADSEELNPRMKDWRDKVRELAYDMEDCIDAFTSRVDHNNDGSTGFKEFFHKFKKLKARHKIANEIEELKTRVMEVSERHKRYDFVNQELTKSSSFAIDPRLHALYVEVDRLVGIEGPTKHIIDKLITNEDEDSYRQLKVVSIVGFGGLGKTTLANQVYHALRSQFLCSAFISVSRKPNLEKVLRKIAQGVTLPTGKIPDGDIHQLVDKLRTYIQDKSHPLIRRYGYDDEEDEGPSQTVLRTFIDLEMLMIEEQRLDLSLNSTDLKRKKKNEQINLCFAVGCCYWESNVLDRNDHAGADLLNLAGGVEDEVEGAKGEHGGGGEGGGIHEGLVHDPNTQSVASPKSQRCLSGCGSRIITTTRSAAVASFSCCDGGYVYLMEPLNFADSKRLFLKRAFGSEELLYPHLEEVFHGILEKCGGLPLAINTISSLLVDQHAKEEWDRMLTAIGSALAKNPDVENMTKILSLSYLDLPHHLRTCLLYLSVFPEDYVIDKQQLINRWIAEEFIHEEQGRSTYEVGERYFLDLIDRSLIQPVDVKYGQVEACRVHDIILDFIACKAAEENFVTSLDTADFGQVSDRRVRRLSVMNISEDHATISASQIDLSHIRSLTLFGRFMQTPLVDLPAIRVLDLEECENMGDNHPILANVETLLHLKYLRIGMLCPITELPRNIGELRHLETLDMRFACQVKELPSTITRLQRLARLYVHHNTRLPDGVIGKIQNLEELEEFGVVSCEKGKSLQEFGQLPKLRTLKVRCSSTTDDLEGRKRAEDLWNYIGTLISSCNLHHLCILHRQDDPDHLPMSLESWCPPSDNCSLRKLHITHYYISKLPSWMGSLANLKELLLYFYRMRPEDVDILEAIPSLVLLRVRTLYSSNGRITFRGNKGFRCLKYFSLDIDLCGTELEFEAGAMPKIEHLKINFPVHSWTASVNGASDFGIQHLSTLTEVEVGLGCFFIPDTRRMYHPTTEDTDDSPMEDDGEANVVKCFESRIKSAVEALPNRPTCKFNLNTAIVPCPSKKNNGECFEYKRKHPSFPVGSVKAVRDVRISSSAIQDNSMGLRRRRPANQPFRFGWAGLQY
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0174800 | SBH | 7.988661 | 4.923272 | 7.450869 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g07920 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os08g0174800 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0005220 | RBH | 0.0 | 0.000000 | 0.000000 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0005230 | SBH | 0.0 | 0.467364 | 0.275930 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005270 | RBH | 0.0 | 2.212497 | 0.109327 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0005150 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0004960 | SBH | 0.374005 | 5.202730 | 0.000000 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0066900 | SBH | 1.110872 | 14.6362895 | 1.6636305 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004790 | SBH | 0.0 | 1.880098 | 0.044126 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0072600 | SBH | 1.279657 | 2.9665565 | 1.7377145 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0004910 | SBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0004960 | SBH | 0.0 | 6.074957 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004690 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0005060 | SBH | 0.0 | 1.051545 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0004970 | SBH | 0.0 | 12.842177 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G004910 | SBH | 0.023444 | 2.329770 | 0.062550 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0004870 | SBH | 0.0 | 4.828468 | 0.0 |