Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os08g07920 | OGI:08011230 | 1/16 | Nipponbare | IRGSP 1.0 | MSU | Chr08:4462149-4464256 | ||||||||
| Gene Symbol | PI304, OsPi304 | ||||||||||
| DNA seq | ATGGTGGGCGCGCTTGCGAGCGCTTCCACGGGGGTGATGAACTCCGTCATCGCGAAGCTCTCCAAGCTGCTGGAAGACGAGTACGCCAAGCTCAAGGGCGTGCAGCAGCAGATCGCCTTCCTGCGTGACGAGCTCCGCGCCATGAACGCCACGCTCCGCGTGCTGGCCGATGTAGAGGAAGACCTCGACCCCCCCGTGAAGAGGTGGAGGGACAAGGTCCGTGAGCTCACATTCGACATCGACGACTGCATCGACTCGTTTGAGGTCCGTGTAATAAGCCATCAGCAGGAGAGAGGCGAGGGCCTCATCAAGGGGATCATTCGCAAGCTGAAGAAGCTGAGAGCTCGCCATGAGATTGCCAACCAGATCGAGGCACTCAAGGCCCATGTCGTCGAGGAGAGCAAGCGACACAAGAGGTATGATCTTCTCAAGCCATGGTCCAGCAGCTCTGCCACTTTTACTATCGACCCTCGACTGCCGGCGCTCTACGAGGAAGTAGATAAGCTTGTTGGCATCAAAGGGCCTAGGGAGCACATCATTGAATGGTTGACCAACAAGAGGAGTGATAGATCAAGAGAAGATCTTAAAGTCGTGTCCATTGTGGGTTGTGGCGGTCTTGGCAAGACTACTCTGGCTAACCAGGTGTTCAAGGAAATCAGACACCAATTTGATTGTTCAGCCTTTGTGTCTGTGTCCCGGAACCCTGACATAAAGAAGATATTAAGAGACATGCTGAAAGAAGTGAACAGTCTTGACAACACACAACCATGGTCTCCTAATGATGATGAGAGGCAACTAGTCAATAAACTTAGAGATACACTCCAAGATAAAAGGTATGCAAACAGCCATGGCATTTTACATGCATGATTGTGGAATTAAAATTCGTATTTGATCCTAGATAGATATAGCAGATGCTTACATGGTCTAAGTAACATTCTTTGATAAGGTTTAATGCATATAAATATTGCATCAGTTTTTTTTTAAAAAAAAAATTCTTCAATTGTTGTGATATATGCGCCCCAACCGATTTGAACTCTCAATGTAGGACTAATATATTCCCGGGTATTATGTTCACCTCCATTAATGAATGATATGATGCCCTCAGCGGCTCAGCGGCAAACCGTATGTGCAACTGATATCCAGAACCACGGCTTGTACATGATCGTGTTGTATGCCCATCCAGGGTCCTATATACACGTGCTTGTGTAGGGAAGGTTTAAACGCTAATACCAATTGTAACATCCCTAGCTTCCAAAATCCACATTAACCTAGCTCTTCCATGGAGCAGGTCCATGTAAATAGCGCCGTACCCAAGAATTTGAGGCCCTAGCAGGATTTACGATTCTGAGATGGCCTTCCGTTTTGGGCATACAACAAATTTCCTTTTTTATAAACCAAAATTTGAATACAAATTCAAATTCGTAAACCAAAATTTGTAGATTCCGAACAAATTTCATAAACCAAAATTTGAATACAAATTCTCTGAGTTTACCGATAAGCTTGTGAAAACCGGTCGGCTTTGGCGAAATTCCGAGCGAAATCATCGAAATTTCAATCAATAACTATAAATAGAGGTAAACTAAAATTGTTTTCCTTTTTTAATTCGTTATTCTTTTCTTTCCTATTGTAAATTTCAGTAAATACATGGAATACATCAGTTTTTTTGAAAATTTATATCCCAATAGGTTCTATGAATATCATACTATTTATAAGATTTTATTTGATTTTTTCCTTTTTTATCAATTTAAATTTGAATTTGGATGAAACTCATCGAAATCTCAGACGGCTTCTACTTTCGAGCCTCGTCGAAACCTCGAAATTTCGCGGAATTTGACCGGTTTTCGTCGAAATTATGAACATATATAGGATGGAGGGACTAAGAAATTAATTCACAAACCATGGTAGCACTTTGCCTAATTTTGGGAAGAAAGGGTTGTGACATTCAGTTTTCTGTAGCAAGTACAAAAAAAAATCTTCAATGTTTGAAAAGCGTGTTCTTATCATTAACATGAACTACAGTTATTTGATGCAGCCCTGATTACCATTGTACACTTATTGGAGAAAAGAAAAACAATCTTGTTATAACCAGATTAGTGAAGGAGAAATAA
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| CDS seq | ATGGTGGGCGCGCTTGCGAGCGCTTCCACGGGGGTGATGAACTCCGTCATCGCGAAGCTCTCCAAGCTGCTGGAAGACGAGTACGCCAAGCTCAAGGGCGTGCAGCAGCAGATCGCCTTCCTGCGTGACGAGCTCCGCGCCATGAACGCCACGCTCCGCGTGCTGGCCGATGTAGAGGAAGACCTCGACCCCCCCGTGAAGAGGTGGAGGGACAAGGTCCGTGAGCTCACATTCGACATCGACGACTGCATCGACTCGTTTGAGGTCCGTGTAATAAGCCATCAGCAGGAGAGAGGCGAGGGCCTCATCAAGGGGATCATTCGCAAGCTGAAGAAGCTGAGAGCTCGCCATGAGATTGCCAACCAGATCGAGGCACTCAAGGCCCATGTCGTCGAGGAGAGCAAGCGACACAAGAGGTATGATCTTCTCAAGCCATGGTCCAGCAGCTCTGCCACTTTTACTATCGACCCTCGACTGCCGGCGCTCTACGAGGAAGTAGATAAGCTTGTTGGCATCAAAGGGCCTAGGGAGCACATCATTGAATGGTTGACCAACAAGAGGAGTGATAGATCAAGAGAAGATCTTAAAGTCGTGTCCATTGTGGGTTGTGGCGGTCTTGGCAAGACTACTCTGGCTAACCAGGTGTTCAAGGAAATCAGACACCAATTTGATTGTTCAGCCTTTGTGTCTGTGTCCCGGAACCCTGACATAAAGAAGATATTAAGAGACATGCTGAAAGAAGTGAACAGTCTTGACAACACACAACCATGGTCTCCTAATGATGATGAGAGGCAACTAGTCAATAAACTTAGAGATACACTCCAAGATAAAAGCCCTGATTACCATTGTACACTTATTGGAGAAAAGAAAAACAATCTTGTTATAACCAGATTAGTGAAGGAGAAATAA
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| Protein seq | MVGALASASTGVMNSVIAKLSKLLEDEYAKLKGVQQQIAFLRDELRAMNATLRVLADVEEDLDPPVKRWRDKVRELTFDIDDCIDSFEVRVISHQQERGEGLIKGIIRKLKKLRARHEIANQIEALKAHVVEESKRHKRYDLLKPWSSSSATFTIDPRLPALYEEVDKLVGIKGPREHIIEWLTNKRSDRSREDLKVVSIVGCGGLGKTTLANQVFKEIRHQFDCSAFVSVSRNPDIKKILRDMLKEVNSLDNTQPWSPNDDERQLVNKLRDTLQDKSPDYHCTLIGEKKNNLVITRLVKEK |
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| Function | Disease resistance protein PIK6-NP [UniProtKB/Swiss-Prot:Q2QZF1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os08g07920 | LOC_Os08g07920.1 | Chr08 | 4462149 | 4464256 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGGGCGCGCTTGCGAGCGCTTCCACGGGGGTGATGAACTCCGTCATCGCGAAGCTCTCCAAGCTGCTGGAAGACGAGTACGCCAAGCTCAAGGGCGTGCAGCAGCAGATCGCCTTCCTGCGTGACGAGCTCCGCGCCATGAACGCCACGCTCCGCGTGCTGGCCGATGTAGAGGAAGACCTCGACCCCCCCGTGAAGAGGTGGAGGGACAAGGTCCGTGAGCTCACATTCGACATCGACGACTGCATCGACTCGTTTGAGGTCCGTGTAATAAGCCATCAGCAGGAGAGAGGCGAGGGCCTCATCAAGGGGATCATTCGCAAGCTGAAGAAGCTGAGAGCTCGCCATGAGATTGCCAACCAGATCGAGGCACTCAAGGCCCATGTCGTCGAGGAGAGCAAGCGACACAAGAGGTATGATCTTCTCAAGCCATGGTCCAGCAGCTCTGCCACTTTTACTATCGACCCTCGACTGCCGGCGCTCTACGAGGAAGTAGATAAGCTTGTTGGCATCAAAGGGCCTAGGGAGCACATCATTGAATGGTTGACCAACAAGAGGAGTGATAGATCAAGAGAAGATCTTAAAGTCGTGTCCATTGTGGGTTGTGGCGGTCTTGGCAAGACTACTCTGGCTAACCAGGTGTTCAAGGAAATCAGACACCAATTTGATTGTTCAGCCTTTGTGTCTGTGTCCCGGAACCCTGACATAAAGAAGATATTAAGAGACATGCTGAAAGAAGTGAACAGTCTTGACAACACACAACCATGGTCTCCTAATGATGATGAGAGGCAACTAGTCAATAAACTTAGAGATACACTCCAAGATAAAAGCCCTGATTACCATTGTACACTTATTGGAGAAAAGAAAAACAATCTTGTTATAACCAGATTAGTGAAGGAGAAATAA
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| Protein seq | MVGALASASTGVMNSVIAKLSKLLEDEYAKLKGVQQQIAFLRDELRAMNATLRVLADVEEDLDPPVKRWRDKVRELTFDIDDCIDSFEVRVISHQQERGEGLIKGIIRKLKKLRARHEIANQIEALKAHVVEESKRHKRYDLLKPWSSSSATFTIDPRLPALYEEVDKLVGIKGPREHIIEWLTNKRSDRSREDLKVVSIVGCGGLGKTTLANQVFKEIRHQFDCSAFVSVSRNPDIKKILRDMLKEVNSLDNTQPWSPNDDERQLVNKLRDTLQDKSPDYHCTLIGEKKNNLVITRLVKEK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0205150 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g07940 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0205150 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0005210 | SBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0005230 | SBH | 0.0 | 0.467364 | 0.275930 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005260 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0005150 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0004870 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0092600 | SBH | 1.217449 | 3.9047695 | 2.085431 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004700 | SBH | 0.955543 | 0.887038 | 1.775215 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0095800 | SBH | 0.452482 | 0.2215885 | 3.137262 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0004820 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0004870 | SBH | 0.350438 | 8.225467 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004690 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0004970 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0004890 | SBH | 0.915712 | 8.369355 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G004820 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0004870 | SBH | 0.0 | 4.828468 | 0.0 |
