Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
LOC_Os06g38490		OGI:06064590 \| 16/16			Nipponbare \| IRGSP 1.0 \| MSU			Chr06:22809651-22813269		Homologues MicroCollinearity RGI-JBrowse RGAP Ricevarmap2
Gene Symbol		-
DNA seq		ATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTAGCAGATCCAGCAGGAGAAAAAGATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTGACCACGAAAAACAGAACACACAGCAGAAAACTTCCACTGGGAGAAGAGATGAGGGAGGACACTCGCCGGAGACCAAGACCGGTGAAGAGCTCGCCGGCGGCGGACATCGACGGGAATCGCAAGAGCAACCTAGCTCTGATACCATGTGAATTGTGCTAAAATCAGTACGGTGTATTCCAGGAGAGCACTAGCATATACAATGGTATATGGGCCTCATGGGCCAACAGTAAAATAAGTCTAAGACTACATCGCTATACACATATCTAACAAACTTGAGTATCAACTCTCTCGAGGGAGAAATTCCGACATCTCTGTCTCAATGCTCGCGTCTTCAAACCATTAGTTTGTGGTACAATAACCTCCAAGGCAGAATTCCATCCAATCTTAGCCACTGTTCATAACTCCGAACCATTGAGGTCTTTGCTAATTATCTAGAGGGAGAGATACCCAGTGAGCTTGGTTCACTCCAATGTCTTGAGCTCCTCAATCTTTACAATAATAATCTCACAGGAAGCATCCCTTCTTACATAGGGAATTTAAAAAACTTAATCTTGATTGATATAAGTGATAATGGCCTCACTGGATCCATCCCTCCTGAAATTGGCAACCTTCAAAATTTGCAGTTCATGGACTTTGGAAAGAACAAACTTTCAGGATCCATTCCAGCATCTTTAGGTAACCTATTCTCCCTAAATTGGTTGGATCTTGGAAACAACAGTCTCGTTGGAACCATCCCGCCATCACTTGGTGGACTCCCTTATCTCAGTACTTTTATTTTAGCAAGGAACAAACTTGTAGGGAACATCCCTCCATCATTAGGGAACCTTTCTTCCCTCACAGAGTTAAACTTTGCAAGGAATTATCTTACTGGAATCATCCCCCATTCCTTAGGCAATATTTATGGTCTGCATAGTCTCCGTCTTACGGAGAACATGCTCACAGGCACCATTCCTTCGTCCCTAGGCAAACTTATTAATCTTGTTTATATTGGTTTGCAGTTCAACAACCTTATAGGGGAGATCCCTCTATTGCTATTTAACCTCTCATCTCTTCAGAAGCTGGATCTGCAAAATAATAAGTTAAGTGGCAGCTTGCAGAATTATTTTGGAGATAAGTTCCCTCTACTCCAGGGACTTGCCTTGAATGACAACAAATTTCATGGTCCCATTCCTTTATCCCTTTCCAACTGTTCAATGCTTGAACTAATTCAACTAGATAGTAACTCATTCTCAGGAACAATTCCTTCAAATCTCGGAAACCTCAAGAGATTGTCCAAACTGCGTCTCGATTACAATAAATTAGAGGCAAACTACAACTCTGACTGGGATTTCTTGAATGCCTTGACAAACTGCACCCAACTATAAGTTCTGCAGTTAAGTTTCAATAGGCTTAGGGGTGTGCTACCACACTCACTTTCTAATCTTTCAATCAGCTTAGAACACCTTGCGATTCTCAACAATGAAGTAGGAGGAAATATACCTGAAGGAATTGGGAGGCTTTCTAATTTGATGGCACTTTACATGGGTCCTAATCTCCTCACTGGTTCCATACCTGCTTCTCTCGGAAAACTATCAAAATTGAATGTGATATCACTAGCTCAAAATAGACTATCAGGAGAGATCCCACCAACTCTTGGAAATCTCACACAGTTGAGTGAACTCTATCTATCTATGAATGCATTTACTGGGGAAATACCTTCAGCTCTTGGAAAATGCCCTTTAGGTGTATTAGCTCTTGCTTACAACAAACTTAGTGGAAATATACCAAAAGAAATTTTCTCGTCTAGTAGACTAAGATCCATTAGCTTGCTGAGCAACATGTTAGTAGGGCCCATGCCTTCGGAGCTTGGTCTATTGAAAAATTTGCAAGGTCTTGATTTCTCACAAAACAAGCTAACTGGTGAGATTCCCATCTCAATTGGAGGATGCCAGAGTTTGGAATTCCTTCTTGTTTCACAAAATTTCCTTCATGGTTCAATTCCTTCTACAATGAACAAGTTGACAGGCCTTCAAGAGCTAGATCTTTCAAGCAACAACATTTCGGGGATCATTCCAGTGTTTCTTGGCAGCTTTATTGGTCTCACGTATCTGAACCTCTCCTTCAACAACTTGATAGGTGAAGTTCCAGATGATGGGATATTTCGTAATGCAACTGCATTCTCAATTGTTGGAAATGTGGGCCTATGTGGGGGCATTCCAGTATTAAGTTTGCCATCATGTACAAACCAACAAGCAAGAGAGCATAAATTCCCAAAACTAGCTGTAGCCATGTCAGTGTCCATAACATGCTTGTTTCTTGTCATCGGCATAGGTTTGATCTCCGTTTTATGTAAGAAACATAAATCCAGCAGTGGACCGACATCTACCAGAGCTGTCAGGAATCAACTGCCAAGAGTTTCTTATACTGAGCTATCTATGGGAACAAATGGGTTCTCCTCTTCAAATCTCATTGGTGAAGGAAGATTTGGTTCAGTGTACAAGGCAAATATGAGTTTCGATCAATATAGTGTTGTTGCAGTAAAGGTACTCAAGCTCCAAGAGAGGGGAGCATCACATAGTTTTCTTGCGGAATGTGAGGCATTAAGATACCTACGGCATCGCAATCTTGTGAAGATATTAACAGCTTGCTCATCAATTGATCCTAGGGGGCATGATTTTAAAGCACTTATCTTTGAGTATCTACCAAATGGAAGCCTTGAAAAATGGTTGCATACTCATATAGATGAGCAAAGTGATCAAAGTGTCCTAAATATTTACCAGAAGCTAAGCATTGCCACCGATGTAGGATCTGCAGTGGAGTATCTTCATGATTACAAGCCAGTTCCAATAGTTCATTGTGATCTTAAGCCTAGCAATATTCTTCTAGACAGTGATATGATGGCTCATGTGGGTGACTTTGGACTGGCAAGGTTCACAAATCAAGGAGATAACAATGCATCTCAAGTCTCATCCAGCTGGGCCGCATTTAGAGGGACCATTGGATATGCTGCTCCAGGTGCGCATTTATCACTTGCCAAAAATATACTTCTTGCCTTGTTACCATTTAAAATATATGAGACATTTACGATACCTTGTAAATAATTAATTTACTTAGGTAATGACCCATTGAGCTTATGCTTGTGCTGCATTCACATTTTCAGAATATGGAATTGGCAATGAAGTTACTACAAGTGGAGATGTTTATAGCTATGGGATAATCTTACTAGAAATGTTTACAGGAAGAAGGCCTACCGAACAAAATTTTGAGGAGAATACTAACCTTCACAGGTTTGTTGAGGAAGCGCTGCCTGATAGTGTAGAGGATGTTGTGGACCAGAATCTCATATTACCAAGGGAAGACACAGAGATGGATCACAACACACTCCTAAACAAGGAAGCAGCACTTGCATGCATAACTTCTATTTTGAGGGTTGGTATCCTCTGTTCAAAACAATTGCCTACAGAACGGGTGCAAATACGAGATGCTGTAATAGAACTTCACAAAATCAAAGAAAAATTCTTTCCATGA More
CDS seq		ATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTAGCAGATCCAGCAGGAGAAAAAGATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTGACCACGAAAAACAGAACACACAGCAGAAAACTTCCACTGGGAGAAGAGATGAGGGAGGACACTCGCCGGAGACCAAGACCGAGGGAGAGATACCCAGTGAGCTTGGTTCACTCCAATGTCTTGAGCTCCTCAATCTTTACAATAATAATCTCACAGGAAGCATCCCTTCTTACATAGGGAATTTAAAAAACTTAATCTTGATTGATATAAGTGATAATGGCCTCACTGGATCCATCCCTCCTGAAATTGGCAACCTTCAAAATTTGCAGTTCATGGACTTTGGAAAGAACAAACTTTCAGGATCCATTCCAGCATCTTTAGGTAACCTATTCTCCCTAAATTGGTTGGATCTTGGAAACAACAGTCTCGTTGGAACCATCCCGCCATCACTTGGTGGACTCCCTTATCTCAGTACTTTTATTTTAGCAAGGAACAAACTTGTAGGGAACATCCCTCCATCATTAGGGAACCTTTCTTCCCTCACAGAGTTAAACTTTGCAAGGAATTATCTTACTGGAATCATCCCCCATTCCTTAGGCAATATTTATGGTCTGCATAGTCTCCGTCTTACGGAGAACATGCTCACAGGCACCATTCCTTCGTCCCTAGGCAAACTTATTAATCTTGTTTATATTGGTTTGCAGTTCAACAACCTTATAGGGGAGATCCCTCTATTGCTATTTAACCTCTCATCTCTTCAGAAGCTGGATCTGCAAAATAATAAGTTAAGTGGCAGCTTGCAGAATTATTTTGGAGATAAGTTCCCTCTACTCCAGGGACTTGCCTTGAATGACAACAAATTTCATGGTCCCATTCCTTTATCCCTTTCCAACTGTTCAATGCTTGAACTAATTCAACTAGATAAACACCTTGCGATTCTCAACAATGAAGTAGGAGGAAATATACCTGAAGGAATTGGGAGGCTTTCTAATTTGATGGCACTTTACATGGGTCCTAATCTCCTCACTGGTTCCATACCTGCTTCTCTCGGAAAACTATCAAAATTGAATGTGATATCACTAGCTCAAAATAGACTATCAGGAGAGATCCCACCAACTCTTGGAAATCTCACACAGTTGAGTGAACTCTATCTATCTATGAATGCATTTACTGGGGAAATACCTTCAGCTCTTGGAAAATGCCCTTTAGGTGTATTAGCTCTTGCTTACAACAAACTTAGTGGAAATATACCAAAAGAAATTTTCTCGTCTAGTAGACTAAGATCCATTAGCTTGCTGAGCAACATGTTAGTAGGGCCCATGCCTTCGGAGCTTGGTCTATTGAAAAATTTGCAAGGTCTTGATTTCTCACAAAACAAGCTAACTGGTGAGATTCCCATCTCAATTGGAGGATGCCAGAGTTTGGAATTCCTTCTTGTTTCACAAAATTTCCTTCATGGTTCAATTCCTTCTACAATGAACAAGTTGACAGGCCTTCAAGAGCTAGATCTTTCAAGCAACAACATTTCGGGGATCATTCCAGTGTTTCTTGGCAGCTTTATTGGTCTCACGTATCTGAACCTCTCCTTCAACAACTTGATAGGTGAAGTTCCAGATGATGGGATATTTCGTAATGCAACTGCATTCTCAATTGTTGGAAATGTGGGCCTATGTGGGGGCATTCCAGTATTAAGTTTGCCATCATGTACAAACCAACAAGCAAGAGAGCATAAATTCCCAAAACTAGCTGTAGCCATGTCAGTGTCCATAACATGCTTGTTTCTTGTCATCGGCATAGGTTTGATCTCCGTTTTATGTAAGAAACATAAATCCAGCAGTGGACCGACATCTACCAGAGCTGTCAGGAATCAACTGCCAAGAGTTTCTTATACTGAGCTATCTATGGGAACAAATGGGTTCTCCTCTTCAAATCTCATTGGTGAAGGAAGATTTGGTTCAGTGTACAAGGCAAATATGAGTTTCGATCAATATAGTGTTGTTGCAGTAAAGGTACTCAAGCTCCAAGAGAGGGGAGCATCACATAGTTTTCTTGCGGAATGTGAGGCATTAAGATACCTACGGCATCGCAATCTTGTGAAGATATTAACAGCTTGCTCATCAATTGATCCTAGGGGGCATGATTTTAAAGCACTTATCTTTGAGTATCTACCAAATGGAAGCCTTGAAAAATGGTTGCATACTCATATAGATGAGCAAAGTGATCAAAGTGTCCTAAATATTTACCAGAAGCTAAGCATTGCCACCGATGTAGGATCTGCAGTGGAGTATCTTCATGATTACAAGCCAGTTCCAATAGTTCATTGTGATCTTAAGCCTAGCAATATTCTTCTAGACAGTGATATGATGGCTCATGTGGGTGACTTTGGACTGGCAAGGTTCACAAATCAAGGAGATAACAATGCATCTCAAGTCTCATCCAGCTGGGCCGCATTTAGAGGGACCATTGGATATGCTGCTCCAGAATATGGAATTGGCAATGAAGTTACTACAAGTGGAGATGTTTATAGCTATGGGATAATCTTACTAGAAATGTTTACAGGAAGAAGGCCTACCGAACAAAATTTTGAGGAGAATACTAACCTTCACAGGTTTGTTGAGGAAGCGCTGCCTGATAGTGTAGAGGATGTTGTGGACCAGAATCTCATATTACCAAGGGAAGACACAGAGATGGATCACAACACACTCCTAAACAAGGAAGCAGCACTTGCATGCATAACTTCTATTTTGAGGGTTGGTATCCTCTGTTCAAAACAATTGCCTACAGAACGGGTGCAAATACGAGATGCTGTAATAGAACTTCACAAAATCAAAGAAAAATTCTTTCCATGA More
Protein seq		MLQPEEKRVDPQNQVADPAGEKDAPARREEGRSPKSSDHEKQNTQQKTSTGRRDEGGHSPETKTEGEIPSELGSLQCLELLNLYNNNLTGSIPSYIGNLKNLILIDISDNGLTGSIPPEIGNLQNLQFMDFGKNKLSGSIPASLGNLFSLNWLDLGNNSLVGTIPPSLGGLPYLSTFILARNKLVGNIPPSLGNLSSLTELNFARNYLTGIIPHSLGNIYGLHSLRLTENMLTGTIPSSLGKLINLVYIGLQFNNLIGEIPLLLFNLSSLQKLDLQNNKLSGSLQNYFGDKFPLLQGLALNDNKFHGPIPLSLSNCSMLELIQLDKHLAILNNEVGGNIPEGIGRLSNLMALYMGPNLLTGSIPASLGKLSKLNVISLAQNRLSGEIPPTLGNLTQLSELYLSMNAFTGEIPSALGKCPLGVLALAYNKLSGNIPKEIFSSSRLRSISLLSNMLVGPMPSELGLLKNLQGLDFSQNKLTGEIPISIGGCQSLEFLLVSQNFLHGSIPSTMNKLTGLQELDLSSNNISGIIPVFLGSFIGLTYLNLSFNNLIGEVPDDGIFRNATAFSIVGNVGLCGGIPVLSLPSCTNQQAREHKFPKLAVAMSVSITCLFLVIGIGLISVLCKKHKSSSGPTSTRAVRNQLPRVSYTELSMGTNGFSSSNLIGEGRFGSVYKANMSFDQYSVVAVKVLKLQERGASHSFLAECEALRYLRHRNLVKILTACSSIDPRGHDFKALIFEYLPNGSLEKWLHTHIDEQSDQSVLNIYQKLSIATDVGSAVEYLHDYKPVPIVHCDLKPSNILLDSDMMAHVGDFGLARFTNQGDNNASQVSSSWAAFRGTIGYAAPEYGIGNEVTTSGDVYSYGIILLEMFTGRRPTEQNFEENTNLHRFVEEALPDSVEDVVDQNLILPREDTEMDHNTLLNKEAALACITSILRVGILCSKQLPTERVQIRDAVIELHKIKEKFFP
Function		Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
LOC_Os06g38490	LOC_Os06g38490.1	Chr06	22809651	22813269	+	MSU_osa1r7
CDS seq	ATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTAGCAGATCCAGCAGGAGAAAAAGATGCTCCAGCCAGAAGAGAAGAGGGTCGATCCCCAAAATCAAGTGACCACGAAAAACAGAACACACAGCAGAAAACTTCCACTGGGAGAAGAGATGAGGGAGGACACTCGCCGGAGACCAAGACCGAGGGAGAGATACCCAGTGAGCTTGGTTCACTCCAATGTCTTGAGCTCCTCAATCTTTACAATAATAATCTCACAGGAAGCATCCCTTCTTACATAGGGAATTTAAAAAACTTAATCTTGATTGATATAAGTGATAATGGCCTCACTGGATCCATCCCTCCTGAAATTGGCAACCTTCAAAATTTGCAGTTCATGGACTTTGGAAAGAACAAACTTTCAGGATCCATTCCAGCATCTTTAGGTAACCTATTCTCCCTAAATTGGTTGGATCTTGGAAACAACAGTCTCGTTGGAACCATCCCGCCATCACTTGGTGGACTCCCTTATCTCAGTACTTTTATTTTAGCAAGGAACAAACTTGTAGGGAACATCCCTCCATCATTAGGGAACCTTTCTTCCCTCACAGAGTTAAACTTTGCAAGGAATTATCTTACTGGAATCATCCCCCATTCCTTAGGCAATATTTATGGTCTGCATAGTCTCCGTCTTACGGAGAACATGCTCACAGGCACCATTCCTTCGTCCCTAGGCAAACTTATTAATCTTGTTTATATTGGTTTGCAGTTCAACAACCTTATAGGGGAGATCCCTCTATTGCTATTTAACCTCTCATCTCTTCAGAAGCTGGATCTGCAAAATAATAAGTTAAGTGGCAGCTTGCAGAATTATTTTGGAGATAAGTTCCCTCTACTCCAGGGACTTGCCTTGAATGACAACAAATTTCATGGTCCCATTCCTTTATCCCTTTCCAACTGTTCAATGCTTGAACTAATTCAACTAGATAAACACCTTGCGATTCTCAACAATGAAGTAGGAGGAAATATACCTGAAGGAATTGGGAGGCTTTCTAATTTGATGGCACTTTACATGGGTCCTAATCTCCTCACTGGTTCCATACCTGCTTCTCTCGGAAAACTATCAAAATTGAATGTGATATCACTAGCTCAAAATAGACTATCAGGAGAGATCCCACCAACTCTTGGAAATCTCACACAGTTGAGTGAACTCTATCTATCTATGAATGCATTTACTGGGGAAATACCTTCAGCTCTTGGAAAATGCCCTTTAGGTGTATTAGCTCTTGCTTACAACAAACTTAGTGGAAATATACCAAAAGAAATTTTCTCGTCTAGTAGACTAAGATCCATTAGCTTGCTGAGCAACATGTTAGTAGGGCCCATGCCTTCGGAGCTTGGTCTATTGAAAAATTTGCAAGGTCTTGATTTCTCACAAAACAAGCTAACTGGTGAGATTCCCATCTCAATTGGAGGATGCCAGAGTTTGGAATTCCTTCTTGTTTCACAAAATTTCCTTCATGGTTCAATTCCTTCTACAATGAACAAGTTGACAGGCCTTCAAGAGCTAGATCTTTCAAGCAACAACATTTCGGGGATCATTCCAGTGTTTCTTGGCAGCTTTATTGGTCTCACGTATCTGAACCTCTCCTTCAACAACTTGATAGGTGAAGTTCCAGATGATGGGATATTTCGTAATGCAACTGCATTCTCAATTGTTGGAAATGTGGGCCTATGTGGGGGCATTCCAGTATTAAGTTTGCCATCATGTACAAACCAACAAGCAAGAGAGCATAAATTCCCAAAACTAGCTGTAGCCATGTCAGTGTCCATAACATGCTTGTTTCTTGTCATCGGCATAGGTTTGATCTCCGTTTTATGTAAGAAACATAAATCCAGCAGTGGACCGACATCTACCAGAGCTGTCAGGAATCAACTGCCAAGAGTTTCTTATACTGAGCTATCTATGGGAACAAATGGGTTCTCCTCTTCAAATCTCATTGGTGAAGGAAGATTTGGTTCAGTGTACAAGGCAAATATGAGTTTCGATCAATATAGTGTTGTTGCAGTAAAGGTACTCAAGCTCCAAGAGAGGGGAGCATCACATAGTTTTCTTGCGGAATGTGAGGCATTAAGATACCTACGGCATCGCAATCTTGTGAAGATATTAACAGCTTGCTCATCAATTGATCCTAGGGGGCATGATTTTAAAGCACTTATCTTTGAGTATCTACCAAATGGAAGCCTTGAAAAATGGTTGCATACTCATATAGATGAGCAAAGTGATCAAAGTGTCCTAAATATTTACCAGAAGCTAAGCATTGCCACCGATGTAGGATCTGCAGTGGAGTATCTTCATGATTACAAGCCAGTTCCAATAGTTCATTGTGATCTTAAGCCTAGCAATATTCTTCTAGACAGTGATATGATGGCTCATGTGGGTGACTTTGGACTGGCAAGGTTCACAAATCAAGGAGATAACAATGCATCTCAAGTCTCATCCAGCTGGGCCGCATTTAGAGGGACCATTGGATATGCTGCTCCAGAATATGGAATTGGCAATGAAGTTACTACAAGTGGAGATGTTTATAGCTATGGGATAATCTTACTAGAAATGTTTACAGGAAGAAGGCCTACCGAACAAAATTTTGAGGAGAATACTAACCTTCACAGGTTTGTTGAGGAAGCGCTGCCTGATAGTGTAGAGGATGTTGTGGACCAGAATCTCATATTACCAAGGGAAGACACAGAGATGGATCACAACACACTCCTAAACAAGGAAGCAGCACTTGCATGCATAACTTCTATTTTGAGGGTTGGTATCCTCTGTTCAAAACAATTGCCTACAGAACGGGTGCAAATACGAGATGCTGTAATAGAACTTCACAAAATCAAAGAAAAATTCTTTCCATGA More
Protein seq	MLQPEEKRVDPQNQVADPAGEKDAPARREEGRSPKSSDHEKQNTQQKTSTGRRDEGGHSPETKTEGEIPSELGSLQCLELLNLYNNNLTGSIPSYIGNLKNLILIDISDNGLTGSIPPEIGNLQNLQFMDFGKNKLSGSIPASLGNLFSLNWLDLGNNSLVGTIPPSLGGLPYLSTFILARNKLVGNIPPSLGNLSSLTELNFARNYLTGIIPHSLGNIYGLHSLRLTENMLTGTIPSSLGKLINLVYIGLQFNNLIGEIPLLLFNLSSLQKLDLQNNKLSGSLQNYFGDKFPLLQGLALNDNKFHGPIPLSLSNCSMLELIQLDKHLAILNNEVGGNIPEGIGRLSNLMALYMGPNLLTGSIPASLGKLSKLNVISLAQNRLSGEIPPTLGNLTQLSELYLSMNAFTGEIPSALGKCPLGVLALAYNKLSGNIPKEIFSSSRLRSISLLSNMLVGPMPSELGLLKNLQGLDFSQNKLTGEIPISIGGCQSLEFLLVSQNFLHGSIPSTMNKLTGLQELDLSSNNISGIIPVFLGSFIGLTYLNLSFNNLIGEVPDDGIFRNATAFSIVGNVGLCGGIPVLSLPSCTNQQAREHKFPKLAVAMSVSITCLFLVIGIGLISVLCKKHKSSSGPTSTRAVRNQLPRVSYTELSMGTNGFSSSNLIGEGRFGSVYKANMSFDQYSVVAVKVLKLQERGASHSFLAECEALRYLRHRNLVKILTACSSIDPRGHDFKALIFEYLPNGSLEKWLHTHIDEQSDQSVLNIYQKLSIATDVGSAVEYLHDYKPVPIVHCDLKPSNILLDSDMMAHVGDFGLARFTNQGDNNASQVSSSWAAFRGTIGYAAPEYGIGNEVTTSGDVYSYGIILLEMFTGRRPTEQNFEENTNLHRFVEEALPDSVEDVVDQNLILPREDTEMDHNTLLNKEAALACITSILRVGILCSKQLPTERVQIRDAVIELHKIKEKFFP More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.000000	0.058048	0.105899

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_06g0583600	RBH	0.0	0.120431	0.574042
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os11g43640	RBH	0.0	0.0	8.923778
Nipponbare \| IRGSP 1.0 \| RAP-db	Os06g0583600	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_06g0020780	SBH	0.134115	1.062366	0.983788
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_06g0020480	RBH	0.035566	0.000000	0.040024
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_06g0020730	SBH	0.119523	0.974873	2.135322
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_06g0020390	RBH	0.0	0.0	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_06g0020790	RBH	0.0	0.955273	0.955475
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_06G0361800	RBH	0.134638	0.4822645	0.0898625
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_06g0020200	RBH	0.054808	0.0	0.0
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_06G0337500	RBH	0.1316725	0.675055	2.2701885
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_06g0020740	SBH	0.0	0.000000	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_06g0020690	RBH	0.0	0.858495	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_06g0020300	RBH	0.0	0.000000	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_06g0020990	RBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_06g0020450	RBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_06G020360	RBH	0.000000	0.0	0.100837
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_06g0020610	RBH	0.0	0.0	0.0

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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