Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g34970 | OGI:06056220 | 4/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:20337988-20338404 | ||||||||
| Gene Symbol | RLCK206, OsRLCK206 | ||||||||||
| DNA seq | TCAAGACGCCGGGAGAAGACGCTGGTGGTGTAGATGCAGGTGATGACGGGGAAGAGCTGGAGCCTGGAGGTAGAAGTCGATCTTCTCCTTGATGCGCTGGAACTGCTCGGCGATCTTGGCGCCGCGGAAGAAGCGGCGGAAGTAGCTGCTGGCCTCGCAGGAGGAGACGAGCACGACGGCCTCCCGGAGCGTCCCCTCCAGCTTCTCCAGCGGGGCGGCGATCCGCGGGTCGTCCCTCTCCACGTGATGCAGGAGCCCCCCGACCGTTTCCACGTGCTCCGCCAGCTGCCGGCACTCGTACTTGTTGCGCCGCACCTTCTCCGCCCGCTCCGTCACCATGCTGATCAGACCGTAGGCGTCCACGCCGGCGATCTGGGCCACAGTCGCCACCGGGTCCACACTGCTCCATATCGGCAT
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| CDS seq | ATGCCGATATGGAGCAGTGTGGACCCGGTGGCGACTGTGGCCCAGATCGCCGGCGTGGACGCCTACGGTCTGATCAGCATGGTGACGGAGCGGGCGGAGAAGGTGCGGCGCAACAAGTACGAGTGCCGGCAGCTGGCGGAGCACGTGGAAACGGTCGGGGGGCTCCTGCATCACGTGGAGAGGGACGACCCGCGGATCGCCGCCCCGCTGGAGAAGCTGGAGGGGACGCTCCGGGAGGCCGTCGTGCTCGTCTCCTCCTGCGAGGCCAGCAGCTACTTCCGCCGCTTCTTCCGCGGCGCCAAGATCGCCGAGCAGTTCCAGCGCATCAAGGAGAAGATCGACTTCTACCTCCAGGCTCCAGCTCTTCCCCGTCATCACCTGCATCTACACCACCAGCGTCTTCTCCCGGCGTCTTGA
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| Protein seq | MPIWSSVDPVATVAQIAGVDAYGLISMVTERAEKVRRNKYECRQLAEHVETVGGLLHHVERDDPRIAAPLEKLEGTLREAVVLVSSCEASSYFRRFFRGAKIAEQFQRIKEKIDFYLQAPALPRHHLHLHHQRLLPAS |
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| Function | Cell number regulator 13 [UniProtKB/Swiss-Prot:B6SJQ0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g34970 | LOC_Os06g34970.1 | Chr06 | 20337988 | 20338404 | - | MSU_osa1r7 | ||
| CDS seq | ATGCCGATATGGAGCAGTGTGGACCCGGTGGCGACTGTGGCCCAGATCGCCGGCGTGGACGCCTACGGTCTGATCAGCATGGTGACGGAGCGGGCGGAGAAGGTGCGGCGCAACAAGTACGAGTGCCGGCAGCTGGCGGAGCACGTGGAAACGGTCGGGGGGCTCCTGCATCACGTGGAGAGGGACGACCCGCGGATCGCCGCCCCGCTGGAGAAGCTGGAGGGGACGCTCCGGGAGGCCGTCGTGCTCGTCTCCTCCTGCGAGGCCAGCAGCTACTTCCGCCGCTTCTTCCGCGGCGCCAAGATCGCCGAGCAGTTCCAGCGCATCAAGGAGAAGATCGACTTCTACCTCCAGGCTCCAGCTCTTCCCCGTCATCACCTGCATCTACACCACCAGCGTCTTCTCCCGGCGTCTTGA
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| Protein seq | MPIWSSVDPVATVAQIAGVDAYGLISMVTERAEKVRRNKYECRQLAEHVETVGGLLHHVERDDPRIAAPLEKLEGTLREAVVLVSSCEASSYFRRFFRGAKIAEQFQRIKEKIDFYLQAPALPRHHLHLHHQRLLPAS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.368361 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0541600 | RBH | 0.000000 | 0.0 | 0.558725 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0541600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0018710 | RBH | 0.0 | 1.296504 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0018540 | RBH | 0.0 | 2.062967 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0018460 | RBH | 0.0 | 3.862845 | 0.371549 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0026620 | SBH | 0.000000 | 0.169841 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0027090 | SBH | 0.000000 | 0.000000 | 2.096012 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0026500 | SBH | 0.0 | 0.136337 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0027010 | SBH | 0.028776 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0027040 | SBH | 0.000000 | 1.514300 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0026660 | SBH | 1.708287 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0027310 | SBH | 0.243869 | 3.777114 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0026920 | SBH | 0.000000 | 1.888936 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G026820 | SBH | 0.336151 | 3.718149 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0026910 | SBH | 0.000000 | 15.637341 | 0.000000 |
