Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os06g09790 | OGI:06013960 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr06:4991219-4992149 | ||||||||
| Gene Symbol | ERF15, OsERF#015, OsERF015, OsERF15, AP2/EREBP#102, AP2/EREBP102 | ||||||||||
| DNA seq | ATGCAGGCCAACACGACGCAGCCGGCGCCGGAGAAGGAGACGAGGTATAAGGGCGTGCGGCTACGGCAGTGGGGGAAATGGGTGGCGGAGATCCGACTGCCCAACAGCCGCAAGAGGATATGGCTGGGATCCTACTACACACCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATATGTCTCCGCGGCGGTGAGGCCATTGCCGGGCTCAACTTCACCGAGTCACCGCCGGCCGTCGTCGCCCGCACCACCGACCCGCGGGAGGTGCTCGCCTTCGCGACGTCGCATGCCAACCTGCTGTCGTTGTTGGATGCCGCCATTGCGCAAGAAGAAGAAGCTCATTCTTTCAAAAAAGAAGAAGAAGCTCAGGTGGAGGAGAAGACGGCTGAGGAGTCCTCAGACGTGGTCAGGGCAAATGCGGCGCCACCACCGCCGGTGCAGGTGGCAGGTGGGAGCTTTGACTGGTCACAGCTGCCGCTCTACTCGCCAACGACAACCCCAGCTGCAGAGCATTGGGAGGAAGATAACGTCGAAGGTACTACAAGTGATAACCTTTGGAGCTTCGATTTCTGACCCTCCACTTCATATGTTTATGCCTCAGAACCTCGATTCTTGGAGATATATATATATATGTGTTGTTCTCTGTTTATTAACGAGATTTTTTTTCTAAATCTATCTGTTATACATTATTAGAAAGAATAAGATTAAGCGAAGTACGTGAGCATAGTTCAGCTGGTCAGATTCCTTGTGGTTAGACATGCCTACCCGGATTCAAGTTCTAAACTTAACACGTACGGGGTGCTGGCATGTACGATTATTTATTCTTTCGATGGCAGGCGACATACCCGTCTGTAGCGAGATATCTGTGGAGACTTCGTCAAACTCAAGATATATCGGTGTAGTCTTTCAGATGCACTCATATGGGTAG
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| CDS seq | ATGCAGGCCAACACGACGCAGCCGGCGCCGGAGAAGGAGACGAGGTATAAGGGCGTGCGGCTACGGCAGTGGGGGAAATGGGTGGCGGAGATCCGACTGCCCAACAGCCGCAAGAGGATATGGCTGGGATCCTACTACACACCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATATGTCTCCGCGGCGGTGAGGCCATTGCCGGGCTCAACTTCACCGAGTCACCGCCGGCCGTCGTCGCCCGCACCACCGACCCGCGGGAGGTGCTCGCCTTCGCGACGTCGCATGCCAACCTGCTGTCGTTGTTGGATGCCGCCATTGCGCAAGAAGAAGAAGCTCATTCTTTCAAAAAAGAAGAAGAAGCTCAGGTGGAGGAGAAGACGGCTGAGGAGTCCTCAGACGTGGTCAGGGCAAATGCGGCGCCACCACCGCCGGTGCAGGTGGCAGGTGGGAGCTTTGACTGGTCACAGCTGCCGCTCTACTCGCCAACGACAACCCCAGCTGCAGAGCATTGGGAGGAAGATAACGTCGAAGGCGACATACCCGTCTGTAGCGAGATATCTGTGGAGACTTCGTCAAACTCAAGATATATCGGTGTAGTCTTTCAGATGCACTCATATGGGTAG
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| Protein seq | MQANTTQPAPEKETRYKGVRLRQWGKWVAEIRLPNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTESPPAVVARTTDPREVLAFATSHANLLSLLDAAIAQEEEAHSFKKEEEAQVEEKTAEESSDVVRANAAPPPPVQVAGGSFDWSQLPLYSPTTTPAAEHWEEDNVEGDIPVCSEISVETSSNSRYIGVVFQMHSYG |
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| Function | Ethylene-responsive transcription factor ERF018 [UniProtKB/Swiss-Prot:Q9S7L5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os06g09790 | LOC_Os06g09790.1 | Chr06 | 4991219 | 4992149 | + | MSU_osa1r7 | ||
| CDS seq | ATGCAGGCCAACACGACGCAGCCGGCGCCGGAGAAGGAGACGAGGTATAAGGGCGTGCGGCTACGGCAGTGGGGGAAATGGGTGGCGGAGATCCGACTGCCCAACAGCCGCAAGAGGATATGGCTGGGATCCTACTACACACCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATATGTCTCCGCGGCGGTGAGGCCATTGCCGGGCTCAACTTCACCGAGTCACCGCCGGCCGTCGTCGCCCGCACCACCGACCCGCGGGAGGTGCTCGCCTTCGCGACGTCGCATGCCAACCTGCTGTCGTTGTTGGATGCCGCCATTGCGCAAGAAGAAGAAGCTCATTCTTTCAAAAAAGAAGAAGAAGCTCAGGTGGAGGAGAAGACGGCTGAGGAGTCCTCAGACGTGGTCAGGGCAAATGCGGCGCCACCACCGCCGGTGCAGGTGGCAGGTGGGAGCTTTGACTGGTCACAGCTGCCGCTCTACTCGCCAACGACAACCCCAGCTGCAGAGCATTGGGAGGAAGATAACGTCGAAGGCGACATACCCGTCTGTAGCGAGATATCTGTGGAGACTTCGTCAAACTCAAGATATATCGGTGTAGTCTTTCAGATGCACTCATATGGGTAG
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| Protein seq | MQANTTQPAPEKETRYKGVRLRQWGKWVAEIRLPNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTESPPAVVARTTDPREVLAFATSHANLLSLLDAAIAQEEEAHSFKKEEEAQVEEKTAEESSDVVRANAAPPPPVQVAGGSFDWSQLPLYSPTTTPAAEHWEEDNVEGDIPVCSEISVETSSNSRYIGVVFQMHSYG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0166400 | SBH | 0.692589 | 1.494779 | 1.926731 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g54050 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0166400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0006770 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0006610 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0006600 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0006700 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0006600 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0083100 | SBH | 0.010168 | 0.190034 | 0.019337 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0006440 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0082200 | SBH | 0.031894 | 0.1582885 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0006820 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0006670 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0006720 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0006740 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0006600 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G006440 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0006720 | RBH | 0.0 | 0.0 | 0.000000 |
