Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsIR64_06g0006440 | OGI:06014010 | 13/16 | IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | Chr06:5471120-5471743 | ||||||||
| Gene Symbol | ERF16, OsERF#016, OsERF016, OsERF16, AP2/EREBP#055, AP2/EREBP55, ERF15, OsERF#015, OsERF015, OsERF15, AP2/EREBP#102, AP2/EREBP102, ERF14, OsERF#014, OsERF014, OsERF14, AP2/EREBP#103, AP2/EREBP103, ERF13, OsERF#013, OsERF013, OsERF13, AP2/EREBP#143, AP2/EREBP143 | ||||||||||
| DNA seq | ATGGAGCCAGTGTCTTTCATGCAGAAGAGCGCGGCGGCGGCGGCGGACGGCGGCAGCGCGGCGCAGGCGGCGGCGGAGAGGAGGAAATACAAGGGCGTGCGGCTGCGTCAGTGGGGGAAGTGGGCGGCGGAGATCCGTCTGCCCAGCAGCCGCGAGAGGATATGGCTGGGATCCTACGACACGCCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATCTGCCTCCGCGGCGTCCAAGCCATTGCCGGCCTCAACTTCCCCGAGTCCCCGCCGCCGCCTACCGCCGCCCGCACCGGCGATCTGCGTGAGGTGTATGCCTTCGCTGTGTCGCATGCCAACCGGCCGTCGGCCGAAGCGGCGCCGGCCGACATTGTTGTTCCAGCTCAGGTCGCGACCGAGGAGTCCGACGGCGTTGTGAGGGGAAATGCGGCGCCGCCGCCGGTGCAGGTGGCGGCTGGGAGCTTGGACTGGTCGCAGTTCATGGCGAACCCACCACCTATGTACTCACCGACGGCGACTGCCGGAAGCCAGGCGATGTGGCCGGTGACAGCACCGGCAGCAGAAGCCGACGGTGAGGATGACGAATTAGCTACTACATGTCGTTGGAGCTTCGATGCCTAG
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| CDS seq | ATGGAGCCAGTGTCTTTCATGCAGAAGAGCGCGGCGGCGGCGGCGGACGGCGGCAGCGCGGCGCAGGCGGCGGCGGAGAGGAGGAAATACAAGGGCGTGCGGCTGCGTCAGTGGGGGAAGTGGGCGGCGGAGATCCGTCTGCCCAGCAGCCGCGAGAGGATATGGCTGGGATCCTACGACACGCCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATCTGCCTCCGCGGCGTCCAAGCCATTGCCGGCCTCAACTTCCCCGAGTCCCCGCCGCCGCCTACCGCCGCCCGCACCGGCGATCTGCGTGAGGTGTATGCCTTCGCTGTGTCGCATGCCAACCGGCCGTCGGCCGAAGCGGCGCCGGCCGACATTGTTGTTCCAGCTCAGGTCGCGACCGAGGAGTCCGACGGCGTTGTGAGGGGAAATGCGGCGCCGCCGCCGGTGCAGGTGGCGGCTGGGAGCTTGGACTGGTCGCAGTTCATGGCGAACCCACCACCTATGTACTCACCGACGGCGACTGCCGGAAGCCAGGCGATGTGGCCGGTGACAGCACCGGCAGCAGAAGCCGACGGTGAGGATGACGAATTAGCTACTACATGTCGTTGGAGCTTCGATGCCTAG
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| Protein seq | MEPVSFMQKSAAAAADGGSAAQAAAERRKYKGVRLRQWGKWAAEIRLPSSRERIWLGSYDTPEKAARAFDAAFICLRGVQAIAGLNFPESPPPPTAARTGDLREVYAFAVSHANRPSAEAAPADIVVPAQVATEESDGVVRGNAAPPPVQVAAGSLDWSQFMANPPPMYSPTATAGSQAMWPVTAPAAEADGEDDELATTCRWSFDA |
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| Function | Ethylene-responsive transcription factor ERF017 [UniProtKB/Swiss-Prot:Q84QC2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsIR64_06g0006440 | OsIR64_06g0006440.01 | Chr06 | 5471120 | 5471743 | + | NAM | ||
| CDS seq | ATGGAGCCAGTGTCTTTCATGCAGAAGAGCGCGGCGGCGGCGGCGGACGGCGGCAGCGCGGCGCAGGCGGCGGCGGAGAGGAGGAAATACAAGGGCGTGCGGCTGCGTCAGTGGGGGAAGTGGGCGGCGGAGATCCGTCTGCCCAGCAGCCGCGAGAGGATATGGCTGGGATCCTACGACACGCCGGAGAAGGCGGCGCGGGCGTTCGACGCCGCGTTCATCTGCCTCCGCGGCGTCCAAGCCATTGCCGGCCTCAACTTCCCCGAGTCCCCGCCGCCGCCTACCGCCGCCCGCACCGGCGATCTGCGTGAGGTGTATGCCTTCGCTGTGTCGCATGCCAACCGGCCGTCGGCCGAAGCGGCGCCGGCCGACATTGTTGTTCCAGCTCAGGTCGCGACCGAGGAGTCCGACGGCGTTGTGAGGGGAAATGCGGCGCCGCCGCCGGTGCAGGTGGCGGCTGGGAGCTTGGACTGGTCGCAGTTCATGGCGAACCCACCACCTATGTACTCACCGACGGCGACTGCCGGAAGCCAGGCGATGTGGCCGGTGACAGCACCGGCAGCAGAAGCCGACGGTGAGGATGACGAATTAGCTACTACATGTCGTTGGAGCTTCGATGCCTAG
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| Protein seq | MEPVSFMQKSAAAAADGGSAAQAAAERRKYKGVRLRQWGKWAAEIRLPSSRERIWLGSYDTPEKAARAFDAAFICLRGVQAIAGLNFPESPPPPTAARTGDLREVYAFAVSHANRPSAEAAPADIVVPAQVATEESDGVVRGNAAPPPVQVAAGSLDWSQFMANPPPMYSPTATAGSQAMWPVTAPAAEADGEDDELATTCRWSFDA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0127100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g09810 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0166400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0006770 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0006610 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0006600 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0006700 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0006600 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0083100 | RBH | 0.010168 | 0.190034 | 0.019337 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0035450 | RBH | 0.0 | 0.0 | 0.060391 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0082200 | RBH | 0.031894 | 0.1582885 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0006820 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0006680 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0006720 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0006740 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0006600 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G006440 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0006720 | RBH | 0.0 | 0.0 | 0.000000 |
