Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g30280 | OGI:04058110 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:18078124-18084056 | ||||||||
| Gene Symbol | WAK48, OsWAK48 | ||||||||||
| DNA seq | TCAAGCCGCCGAGCTCTCCAGGACGATCGTCTTCGCCGATTCTACATCATCAGTGGTCTTCATCAACTTGCCGCTGCCGACTCGTCCACATAGATGGACACCTCGCGTCCTCTGATAGATTAATCTGCAAGACGCTTCATCGACGACATCGACCGCATCCTCTACGACGGCAACGACCGCGTCACCAACGACGGCATCGATCACGTCATCTACGACGACAACAACTGCATCAACTCGGCATCACTATTATGGTGACCACTACACGGCACAAAAGGAACAACCAAAATGGTGGCCTCATCGCCAACGACGTCCTCTGACATATGCAAGACGTCTCTAATGGCATCATCTGACATCTACAAGGTGCAAGATGCTAACAATTGCAGTTTCGTCTTCACACCATGGTGTAATTTTTTTTTTCGCCTTCGGCTATATGCGGCTACACCGACAACCACGGCTACTACATGATCGGCTATATCGACGAATGTCTACAACAAGAATCATCTACAGAAACTCCAGTCCAAGCGTCCGTGTCATCGCTATCGTCCATGACACTCCCGCTATGACTGCGGGAGGGAATAGAGGAGAGTCAAGGGACGACACAGAAGGGGACGCAGGCACCAGGTGGAGGACCGTCCATCAGAGATGCAATCGATGATAGTGAGTCGAAAAAGATGGAGAAAAAGATGAAGAAATAGAAGATTTTAAATCCAGTCGCAATCGTTCGCTTCGCTCCCGTTACGACTGAGGGGGAATGTTAGAAGTATAATATGTTAGTTAGAGATAAGAGTCAAATACAAATTATAGAGATAAGATATATCCTAGAGATAGAATCCAAGAGATAAGATAGAGTCCTAGAGATAGAATCCTAGAGATAAATCTACTCTTACTTGTATTGTACTCCAAGTCTCTATCCCCTATGTACTCCTATATATACCCCATGAGAGGGTCGATGTAATAGATCAGAAAACATCAGAATACAACAGTTTAGATTTTTCCACAGTACTATGTTAGGTTTATTTAGTTTTGACCTTGATTGTTTCTCCGCATATGTTTTTATGTGAATCATCATCAAAGTCAGATGGTGAGTCGAAAAAATGTTGTGGCGCCGCCTGTCCACATGCATGGAAAAAGAAAAGGAAAACCAGCACAACAAATGAATGAATTTTTGTGTACTGTAATGCAATTCGTGACTGTTTATTTTTCATGATTATACTGTAACGCAACAAATGTGCCCCATAATACATGCTTAAATGGACCAAGAATACCTGTAAATGTCTAACCGCACCGAAATTCTATTATATTAAAGTGCACCGCGAGTGCACAAGCGCTACTACAGAAACGATTTTTCTAGACGAGACACTCGTTGTATTGCAGACGGGACCATAAATGCCCGCGTCTGAAAAAATCGACCTCCATTTCCACATACGACACCTTAAAAGGCCCTCTTGCGAAAATCGACTTTTGCATGCGGACCCTGTTTTTACCCTGTTCCGTCTTCCATCTAACCCTGTTTTTACCCTGTTAGACCCTCTTCCGTCTAACCCTGTTTCCACTACACCATTAAGATTTGGTTTAAAAGAATGAAATAATTATAATTAAATTTCATAATGCCAAAATATCCTTCAGGAAACCATATCCATCCCAAACCCTATCCACATATGTATCTCTCTCTCTCCTGCTGGCGAGTTGCGGCACCGGCGCTTGGTGTCTTAAGGGAGGAAGGGGATGGTGCCGGCAGGAAGCGCGCGGAGGGGATCCGCACCGGTGCCCGCTTGTGGACGCAGGGGTGGCGGCGGCGGGAAGCGTGTGGAGGCGATCCAGGCCGGCGCACGCTAGTGAAGGGAAGGAACGGCGGCGGTGAGAAACGGACGGAGGGTTCCGTGCCTGCGTCAGATCACGAAGGAAGGGAGCAGCAGCGCCGAGCCTCTTCGACGGCGGTGGCAGCGCCGGCGCGTGGTGAAGCTGCGCGCACAGTCGGGTGAGGCGGCGTCGGCGTCGGAGAAGGTAGGGAAGGGAGCCGTGCTGGAGGGAAGAAGCGGCGCCGCCGGCGCACGGAGGACGGAAGGAGGCAGCATCGGCGCCGGCGCAGGCATGTGGAAAGAGGGAAAAGACGGCGGTGGCGATAGGCATGCGGAAGGAGGGAGGAGGCCGCGGCGCCAGCAGGAAGAGGAGGCACCGCCGGCATGCACGAAGGAAGGAAGGCGGCAAGCCCGCCGATGGAGCTGTGACGGCTAGATCCGGGGAGGGAGGGGCGACGACAGGGCGGTTTTCCACAGCTGCTGGCCGGTGCCGGCTCACCCTCTAGACGCTCGCCGCCTTCTCCCTGCGAGTGGAGCTGTGGAGGAGAGGAGAAGAGAGAAAAGAGAAAAGAGGAGAAGACGAGAAGAGAGAATTGATGGGTGGGTCCCACATATAATAGGGTCAAATGATTAAGGGAAGAAGGAACATTTTGTGCTTCAGTTAACGTCATTAGATGCCCTTAACAGAATAGGGCATACCATATCTTCGGATTTGATAAGAAGGGCCAAATAAGCAAAGTTGATAAAAAAGGGTCAAATTGATAGTTAGCTTTCAAAAGAGGGTCAAATGCGCAATTGCCCCTTAAAAAAAGTCCCATGGTAAATTGCTGGTGTTATATTGAAGATAAGGACTGAAGAGTATAGCGAAACCATACAATTCGCGGTTAATTAGGGGGCAAATCAGAATGAGACCACAAAATTTAGAAACTAACACCGTAGTCAGCTTAACACTACTAAACAATAGTTTTTTTTTTCTGATGACCAAAATCAATCTTGGATGACGGCTAGACTAAACCACCTACGACCAAAGGCCAGAGAAAATACACTATCTGCATATGCGGGCTTCATCTGCGATAAAAAATCTATTTTTACTGGCAGCAAGGTTAAGTGGACCGTCAAAAAAAATTGACTTTTGCAGGCGGCAACATTAAGCCAACCACCAACGAAAATGATTTTCTAGGAAAAATAAATAAATTCCCAAAAATAACTCCACCGAATCCACCGCTCGCAACCCGCACTCGACCTCCTGCCACCAGTGGCCTGTTTGACCCCGGCACCCACAACCCACGCTCGAGTTCCCATCGATGGTGGCCCACACAACCCCACCTCCCACAATGTGCACTGGAGATCTGCCGCCGGTGCCCCGCGCAACCCCGCGCATCTGTGGCCCCATGCTCGAGATCCGCTGTCAGTAACCCACTATCGAGATCCGCCACCAGAGGCCTGCGCAACCTGGCCATTTGTGGTTCGTGCTTGAAATCCGCCGCCGGTGGCCCGTGCGACCCCACCACCCGTAGTCGCTGTCCGTTCGCGTGACGCCGTGAGAGAAAAGATATGGTTAAGGTCACTTAGTCCTGCCAGGATCTGCCCGCCCGGCGCTGCCCTGAGTTAGGAAAGGAGGAAAGGAGGGAGGAGGGATCGAGAGGGAGTGAGAGAGGAGAGGGATGAGAGGCTGAGGATAAGACATATACAATTGGGAGGAGGACCATGTCTTTTATGTAGGCTGAAATTTATTTTTTATGTCGGCTCATTGAGAACTGCTTACGAAAATCTATTTTTACTAAGGCAAATTTTACTATAGGACGCCGTGACTTCATGGATTTAGCTGTAGGACACTATCAGGGTTACGAATAAGATATACCCTCTATCCTTGGATGTACGTTGTATACTGATACGGTATACCCGCGCGTGTACGGATAGTTTCCGTATATATTAAGGAAATCTATCACGTGATAGGGATGGTATCTACAGATGAAAGGAGTTCTACTCGGACAAGACTGGGTCACCATATCGTGAGGGGTCCGATATCTTCGAGTCCTACTTGGAGATCAACTGACCCGCGGTATATAAGGGACCCCTGGGCAGGACCGAAGGCATCGAATATTACCGCCAACACACCCACCACAGCCTACGGAGTCGGAGCGTGCAGGAGCCAAGTCGCCGGGAGATCTAGTCGGACCAACTTGACTATGATCTCGTCGATATCATCGAGTTCTGCTATTCTCTTTGTAATCTGTGGTTTCCATCATATAATTCCATACCAATTGGATTATGGCTATTACCTACCAAGGGGCCTGAACCAGTATAATCCTTATCTTCTATTTGCTTGATGTCGTACTACGTCGATCCTCGTACCAACGGATCCCAATACCTTTTTATCCGGTCTACGGGTATCCCCCGTCGACAGACACCCTTATCTTCTGTTTGCTTGATGTCATACTACATCGATCCTCGTACCAACGGATCCCAATACCCTCTTTATCCGGTCTACGGGTATCCCCCGTCGACAGACACCCTTATCTTCTGTTTGCTTGATGTCATACTACGTCGATCCTCGTACCAACGGATCCCAATACCCTCTTTATCCGGTGCACATGTCAGATCCTCGGCCCACATGTCAGATCTCCCCTTCCCAATTTCGAGCTCACGCGACAAGTCCGACCACCGCGGCGATGGATTTCTCCGGCGGCGACGGCGCAACATTGTCGGACTTGTACCAGAGCACGCGGCGGCTGCTACTCCGCCCGCGATGATGTGGCCCGCGTCAAGCGCCTCGCATCGGTGCCCACCTCGTCCTCCTACTTGGCGCTGATGAGGACGTGCAGCGGGTGGTGCCCACCTCGTCAAACTATTCTAAGTTTAACTAAGTTTATAAATAACTACACACCAAATTATTTCATTAAATCAATAATTAAATATATTTTTATAATATATTTGTCTTGTGTTGGGAATGTTATTAATTACTTTTTGTACAAACTAGGTTAAACTTGGAGAAGTTTATCTTTGACCAAAGTCAAAGCGACTTATAATATGAAACGGATGGTGTAGTATATATACATTACTAGCAAGACTAGTGCAGTGGCATTATGGAAAAAGGTTATTGCATATTTATAAAGTACAAGATGGAGAAAGTACTTTAAAGCCCAAACAAATTAATGTATTGTCGATCAATCATCACTTGCATTATAAATCTACTCACTAGTAGCTTTCAAGAAAGACTTAGGGTAATCGTAATTTTAAAATTCTAGCTATGATGAGATTAGAAGGAATTTTACCTTGGCAACCATCCTGTCGATAAGGATTTCCTTGGTACCCGTTTGTGCAATTGCATATATAGCCTGGTCCATTGGAGGAATTGAAGCACTCGCTCTTGTCACTTTTACACGCGTATAACGTGAGATTTTTTTGTGCTTCGTCACAGTTGTTCACAGTTCGGATAGCCCAATCCAGTAGCATTGGCGCCCGGCCGCCGTAGGAGGTGTTAAACTCCGGCGAAGTCAAGTAGCTTGTTGAGAACTTGAAGTCGGACGAATCCATGAGCACAGCGTAACTGCATAGGGTGGCGTTGTAGATCGAGTCCGACGTGTTGAAGGCTTGGTCGAAGAAGACCTGGTAATAAGGGAGGCCCTTGGGGATGGTTGTCTGGCAGCAGCCTACCCCAGAGCAGGTACCGTTGGTGGCGCTCGTCACGTCACCTCGCCGGCAGGCGGACACGCACCCGCTCATGAGCTTGCCCACGTTGTCCTTATCGGCAATATATGCCAGTGTTCGGCACCCGATGACGGTGAACTTGTTGCCGGTGTCGGACAACATGAACGGAGTGTCCAAGTCACTCTGAAATGTATTTGGTTCCATCAACTTAGATGCAGGATTGTAGCAGAAAGAAGATATCTTATTCAGCACCCGGAGCTGACTGAGCTGAAGGGAGATGTTGACGACCTCGAAATCTCCGAGGAACGGCCTGGAGTTCTTGCAGGCTAGCTCAAATCCAGGCATGGCGCAGCGGCCTGGGCCGATGCTGAATGGGTAAGGGATGTCCACGCTGCCGCACTTGGTGTCCGGGCATTCCGCCACTGCACCGCCGGTGATGAGGCCGAGCTCCAAAGAAGCGAACGCTATGGCGAGCCATAGCAT
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| CDS seq | ATGCTATGGCTCGCCATAGCGTTCGCTTCTTTGGAGCTCGGCCTCATCACCGGCGGTGCAGTGGCGGAATGCCCGGACACCAAGTGCGGCAGCGTGGACATCCCTTACCCATTCAGCATCGGCCCAGGCCGCTGCGCCATGCCTGGATTTGAGCTAGCCTGCAAGAACTCCAGGCCGTTCCTCGGAGATTTCGAGGTCGTCAACATCTCCCTTCAGCTCAGTCAGCTCCGGGTGCTGAATAAGATATCTTCTTTCTGCTACAATCCTGCATCTAAGTTGATGGAACCAAATACATTTCAGAGTGACTTGGACACTCCGTTCATGTTGTCCGACACCGGCAACAAGTTCACCGTCATCGGGTGCCGAACACTGGCATATATTGCCGATAAGGACAACGTGGGCAAGCTCATGAGCGGGTGCGTGTCCGCCTGCCGGCGAGGTGACGTGACGAGCGCCACCAACGGTACCTGCTCTGGGGTAGGCTGCTGCCAGACAACCATCCCCAAGGGCCTCCCTTATTACCAGGTCTTCTTCGACCAAGCCTTCAACACGTCGGACTCGATCTACAACGCCACCCTATGCAGTTACGCTGTGCTCATGGATTCGTCCGACTTCAAGTTCTCAACAAGCTACTTGACTTCGCCGGAGTTTAACACCTCCTACGGCGGCCGGGCGCCAATGCTACTGGATTGGGCTATCCGAACTGTGAACAACTGTGACGAAGCACAAAAAAATCTCACGTTATACGCGTGTAAAAGTGACAAGAGCGAGTGCTTCAATTCCTCCAATGGACCAGGCTATATATGCAATTGCACAAACGGGTACCAAGGAAATCCTTATCGACAGGATGGTTGCCAAGTGGAAACAGGGTTAGACGGAAGAGGGTCTAACAGGGTAAAAACAGGGTTAGATGGAAGACGGAACAGGGCGGCGCCACAACATTTTTTCGACTCACCATCTGACTTTGATGATGATTCACATAAAAACATATGCGGAGAAACAATCAAGGAGTACATAGGGGATAGAGACTTGGAGTACAATACAAATGACGTGATCGATGCCGTCGTTGGTGACGCGGTCGTTGCCGTCGTAGAGGATGCGGTCGATGTCGTCGATGAAGCGTCTTGCAGATTAATCTATCAGAGGACGCGAGGTGTCCATCTATGTGGACGAGTCGGCAGCGGCAAGTTGATGAAGACCACTGATGATGTAGAATCGGCGAAGACGATCGTCCTGGAGAGCTCGGCGGCTTGA
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| Protein seq | MLWLAIAFASLELGLITGGAVAECPDTKCGSVDIPYPFSIGPGRCAMPGFELACKNSRPFLGDFEVVNISLQLSQLRVLNKISSFCYNPASKLMEPNTFQSDLDTPFMLSDTGNKFTVIGCRTLAYIADKDNVGKLMSGCVSACRRGDVTSATNGTCSGVGCCQTTIPKGLPYYQVFFDQAFNTSDSIYNATLCSYAVLMDSSDFKFSTSYLTSPEFNTSYGGRAPMLLDWAIRTVNNCDEAQKNLTLYACKSDKSECFNSSNGPGYICNCTNGYQGNPYRQDGCQVETGLDGRGSNRVKTGLDGRRNRAAPQHFFDSPSDFDDDSHKNICGETIKEYIGDRDLEYNTNDVIDAVVGDAVVAVVEDAVDVVDEASCRLIYQRTRGVHLCGRVGSGKLMKTTDDVESAKTIVLESSAA |
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| Function | Wall-associated receptor kinase 4 [UniProtKB/Swiss-Prot:Q9LMN6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g30280 | LOC_Os04g30280.1 | Chr04 | 18078124 | 18084056 | - | MSU_osa1r7 | ||
| CDS seq | ATGCTATGGCTCGCCATAGCGTTCGCTTCTTTGGAGCTCGGCCTCATCACCGGCGGTGCAGTGGCGGAATGCCCGGACACCAAGTGCGGCAGCGTGGACATCCCTTACCCATTCAGCATCGGCCCAGGCCGCTGCGCCATGCCTGGATTTGAGCTAGCCTGCAAGAACTCCAGGCCGTTCCTCGGAGATTTCGAGGTCGTCAACATCTCCCTTCAGCTCAGTCAGCTCCGGGTGCTGAATAAGATATCTTCTTTCTGCTACAATCCTGCATCTAAGTTGATGGAACCAAATACATTTCAGAGTGACTTGGACACTCCGTTCATGTTGTCCGACACCGGCAACAAGTTCACCGTCATCGGGTGCCGAACACTGGCATATATTGCCGATAAGGACAACGTGGGCAAGCTCATGAGCGGGTGCGTGTCCGCCTGCCGGCGAGGTGACGTGACGAGCGCCACCAACGGTACCTGCTCTGGGGTAGGCTGCTGCCAGACAACCATCCCCAAGGGCCTCCCTTATTACCAGGTCTTCTTCGACCAAGCCTTCAACACGTCGGACTCGATCTACAACGCCACCCTATGCAGTTACGCTGTGCTCATGGATTCGTCCGACTTCAAGTTCTCAACAAGCTACTTGACTTCGCCGGAGTTTAACACCTCCTACGGCGGCCGGGCGCCAATGCTACTGGATTGGGCTATCCGAACTGTGAACAACTGTGACGAAGCACAAAAAAATCTCACGTTATACGCGTGTAAAAGTGACAAGAGCGAGTGCTTCAATTCCTCCAATGGACCAGGCTATATATGCAATTGCACAAACGGGTACCAAGGAAATCCTTATCGACAGGATGGTTGCCAAGTGGAAACAGGGTTAGACGGAAGAGGGTCTAACAGGGTAAAAACAGGGTTAGATGGAAGACGGAACAGGGCGGCGCCACAACATTTTTTCGACTCACCATCTGACTTTGATGATGATTCACATAAAAACATATGCGGAGAAACAATCAAGGAGTACATAGGGGATAGAGACTTGGAGTACAATACAAATGACGTGATCGATGCCGTCGTTGGTGACGCGGTCGTTGCCGTCGTAGAGGATGCGGTCGATGTCGTCGATGAAGCGTCTTGCAGATTAATCTATCAGAGGACGCGAGGTGTCCATCTATGTGGACGAGTCGGCAGCGGCAAGTTGATGAAGACCACTGATGATGTAGAATCGGCGAAGACGATCGTCCTGGAGAGCTCGGCGGCTTGA
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| Protein seq | MLWLAIAFASLELGLITGGAVAECPDTKCGSVDIPYPFSIGPGRCAMPGFELACKNSRPFLGDFEVVNISLQLSQLRVLNKISSFCYNPASKLMEPNTFQSDLDTPFMLSDTGNKFTVIGCRTLAYIADKDNVGKLMSGCVSACRRGDVTSATNGTCSGVGCCQTTIPKGLPYYQVFFDQAFNTSDSIYNATLCSYAVLMDSSDFKFSTSYLTSPEFNTSYGGRAPMLLDWAIRTVNNCDEAQKNLTLYACKSDKSECFNSSNGPGYICNCTNGYQGNPYRQDGCQVETGLDGRGSNRVKTGLDGRRNRAAPQHFFDSPSDFDDDSHKNICGETIKEYIGDRDLEYNTNDVIDAVVGDAVVAVVEDAVDVVDEASCRLIYQRTRGVHLCGRVGSGKLMKTTDDVESAKTIVLESSAA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0368000 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30110 | SBH | 0.197255 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0368000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0010100 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010870 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010630 | RBH | 0.510751 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010260 | RBH | 0.0 | 0.026015 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010500 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0292800 | RBH | 1.9190635 | 1.80477 | 0.3249005 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0009890 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0284600 | SBH | 0.010814 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010150 | SBH | 0.039004 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010080 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010140 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010640 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010450 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009570 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009590 | RBH | 0.0 | 0.0 | 0.0 |
