Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0368000 | OGI:04058110 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:17874313-17877280 | ||||||||
| Gene Symbol | WAK43, OsWAK43, RLCK146, OsRLCK146, WAK48, OsWAK48 | ||||||||||
| DNA seq | GCTCACTTTGGAACTGTATAAATACCATCACTAGTTATTTTATTACAACTATGTTTATCTTTAATTCTAAAGCGCACCTAAATGCTACTATGCTATTTTACAGATTCAGTTCATCACTAGGAAGAAAACTCAATCTAACACACACCTACAAACCACGCGCGGGAATCAATACAACAAACTGTCTATAGATCATCTTGCAAATTCTATGCTCAACACAGCTTTCTTCTCAAGGCTATAAACTCCACTGGTTGTGCTTCCCATCTCCACAAAGCTCAAATCCTCAAGTACAAGCGGCGGTTGTGGGCATTGTTGCACTTCATCAGCTAGTGCTAGGCGCCGGAGCTCCGCTGCCACCAGCACCATTGTCGGCCTTGTCATACCTGGAACAACCAAGCATTGACTTGCTAGAACAGCTGCCTGATGCATCACTCTCATACTAGCTTCATCAACCATGTCACTATCAAGGAGCTCAAAGAGTGTGCCCTCTGCCATTGCCTCCTGAAACATCAAGGTGAGGCTCTTCCTATCTTTTGACAGCGGCTTCTTACTAGTTAGAAGCTCAAGAAGAATAACTCCGAAACTATATACATCATTCTTAGATGTGAGTTGGTACTCTAGTAGGTAGTCTGGATCAATATACCCTGGTGTTCCTTTGGGTACAGCTTGAGTATTCTCATCGATTGTCGAGCAGCCAAAGTCAGACACCTTTGCGATCAATCCCTCAGCAAGTAGGATATTGGATGGTTTCACATCGCCGTGGATTATAGGGTGTGGCAACGAGTGAAGATGCGCAAGTGCCTCGGCAGATTCTGCAGCGATCCTCATGCGGGTTCCAAGAGTTACATGGAACCTCTTGCTCCTATGGAGATCTAGTAACTCTTGTAGTGTTTTGTTCTGCACGAACTCGTACACAAGCATGGGCGCCTCAAACTGGAGGCAACATCCAAGTAGCTTGACAATGTTGGGATGCCTGACACGGCAAAGTATGACCAACTCCTGCACAAATTCCATCTTTCTGCTCTCGTCGATCTCCTTGCACTTTTTTATTGCAACATTAACTCCGTTCAAGGCCGCCCTATAAACAGTTCCCTGGCCACCTTCACCGATGATGTGTTCCTTGTTGAAGTTACTTGTGGCAGTCTCAATCTCCCCTCTCTCATAGAGGGTGAATCCAACATTACCCTCTACTTTCATCATTTCCAGAAGTAGCTGGCCACCATGCTGTAGAAAAAATTCATGAGTCTGTCTTAATAGTGCTTGTTTTTTTATGCTCCTTTTGTGGCGTATCACTTCCCATCCAAGGAAACTAAAGAGGCCAACTAATACGCAGATAACCGCTCCTGGATAAACAAATATCTGACATTAGTGGAAATATTTGAGCATGTGTAGGTTTTAACATGGATGTCGACCAGATATGCAGCAGTAAAACATAGTCTTAAAAAAAAGAGATTGTAAAACATGTGCCTACCAATTGCCAGTCGTGCTTTTAGCGGCAAGCGGAAGTCTTTTCGGCATCCATCTGGAATGGTAGCATTTCCTTTGCTGCCCGCTGGACAGTTACAATCAAAACCGCCAGGTTTATTACGGCATTCTCCATAGCAATGATGAGTCTTGGAATCTTGACATTCATCAATATCTACAAAATAAAAATGACGAATTTGTAAGATGTGGGGAAAAGAATTTGGTAATCTGGAAAATGGAAACGTGGGAGAATTTCAAATATGAAATGGGATTAATGGAAAAAAGTCAGAATCATAAACAGACTATGTATTGGAAATTTTATAAATGGACCAACTAAACTTATTTCTTAAAAATATAGCCGGATGGAGTAAGAAAACAAAATCATGAAAGCTACACGCTGAAAGCTATTTCATATGAACTGTCACAATTTTAGAATTCTAGATGTAGTATTGATGGGATTATAGGAAAATTCACCTCGACAGCCGTTGGGTCCTTCGAGGTAAGGATTGCCTTCGTACCCTTTGGAGCAGTTGCAGGTGTAGCCAGGTCCGTTGGTTGAGTTGAAGCACTCGCTGTTGGTACTTTTGCACGCGTAAGAGTCCATCTTCTTCCATGCCTCCTCACAACTGTTGGCGCTCCGGATGGCCCAATCGAGCACCATAGGCGCCCGGCCATCATAGGTGTTGTTGAATTCCGATGTAGTCAAGTAGGTGGTCGAGAAGGTGAAGTTGGAGGAGTCCATTAGCACCGCGTAGCTGCAGGGGGTGCGGTTGTAGATCCCCGACGTGTTCATGCTGCTGTCGTCGAAGAAGGCCTGGTAGTAATCCAGGCCCTTTGGGATGGCCGTCTGGCAGCAGCCTATCCCGGAGCAGGTGCCGTTTGTCGCCTTCCACACATCACCTCGCCGGCACACGGACACGCACCCGCTCATGTACTTCCCCACGTAATCCTGGTCGGCGATGTAGGCTTGTGTCCGGCAGCCGACGACCGTGAACTTGTTGGAGTCGGAGAGCATGAACGGCGTGCCAGTCATGTTGAGCTGCCACGTGTCGGAGTCCATCTCCTTAGAAGATAAGTTGTAGCAGGAAGAGGAGATGTGATTCATCACCCGGACCTGGCCAAGCTGGAGGGAGACGCTGAGCACCTCCACATTTCCGTAGAAGGGCTTGTAGACGCCGTTGCCGGTGTCGTTGCAGTCGAATTCGAAGGCGGACGCGGCGCACTTGTCCAAGCTGGTGCTGAATGGGTAAGGGATCTCAACGTCGCCACACTTGGTGTTCTGGCATTGCCCCTCTGCTCTCCCAGCGAGGAGCTCTGCAGCAATCGCTATGGCGAGGCACAGCGTTGTTGTTGTTAGTCCTCTGTGGCTAGTCATGGTGGATGGATGAACTAGCTAGTCCTAGCTATCTGTTTGTGTCTTAAACCTCTGTTTCTTGATAGGTGATTATGGACTTGTGCTTGTATATGAAGATGAGTAGAGCCAGCGTTGAGAATTTGAGATGAATCC
More
|
||||||||||
| CDS seq | ATGACTAGCCACAGAGGACTAACAACAACAACGCTGTGCCTCGCCATAGCGATTGCTGCAGAGCTCCTCGCTGGGAGAGCAGAGGGGCAATGCCAGAACACCAAGTGTGGCGACGTTGAGATCCCTTACCCATTCAGCACCAGCTTGGACAAGTGCGCCGCGTCCGCCTTCGAATTCGACTGCAACGACACCGGCAACGGCGTCTACAAGCCCTTCTACGGAAATGTGGAGGTGCTCAGCGTCTCCCTCCAGCTTGGCCAGGTCCGGGTGATGAATCACATCTCCTCTTCCTGCTACAACTTATCTTCTAAGGAGATGGACTCCGACACGTGGCAGCTCAACATGACTGGCACGCCGTTCATGCTCTCCGACTCCAACAAGTTCACGGTCGTCGGCTGCCGGACACAAGCCTACATCGCCGACCAGGATTACGTGGGGAAGTACATGAGCGGGTGCGTGTCCGTGTGCCGGCGAGGTGATGTGTGGAAGGCGACAAACGGCACCTGCTCCGGGATAGGCTGCTGCCAGACGGCCATCCCAAAGGGCCTGGATTACTACCAGGCCTTCTTCGACGACAGCAGCATGAACACGTCGGGGATCTACAACCGCACCCCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCGACCACCTACTTGACTACATCGGAATTCAACAACACCTATGATGGCCGGGCGCCTATGGTGCTCGATTGGGCCATCCGGAGCGCCAACAGTTGTGAGGAGGCATGGAAGAAGATGGACTCTTACGCGTGCAAAAGTACCAACAGCGAGTGCTTCAACTCAACCAACGGACCTGGCTACACCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCGAAGGACCCAACGGCTGTCGAGATATTGATGAATGTCAAGATTCCAAGACTCATCATTGCTATGGAGAATGCCGTAATAAACCTGGCGGTTTTGATTGTAACTGTCCAGCGGGCAGCAAAGGAAATGCTACCATTCCAGATGGATGCCGAAAAGACTTCCGCTTGCCGCTAAAAGCACGACTGGCAATTGGAGCGGTTATCTGCGTATTAGTTGGCCTCTTTAGTTTCCTTGGATGGGAAGTGATACGCCACAAAAGGAGCATAAAAAAACAAGCACTATTAAGACAGACTCATGAATTTTTTCTACAGCATGGTGGCCAGCTACTTCTGGAAATGATGAAAGTAGAGGGTAATGTTGGATTCACCCTCTATGAGAGAGGGGAGATTGAGACTGCCACAAGTAACTTCAACAAGGAACACATCATCGGTGAAGGTGGCCAGGGAACTGTTTATAGGGCGGCCTTGAACGGAGTTAATGTTGCAATAAAAAAGTGCAAGGAGATCGACGAGAGCAGAAAGATGGAATTTGTGCAGGAGTTGGTCATACTTTGCCGTGTCAGGCATCCCAACATTGTCAAGCTACTTGGATGTTGCCTCCAGTTTGAGGCGCCCATGCTTGTGTACGAGTTCGTGCAGAACAAAACACTACAAGAGTTACTAGATCTCCATAGGAGCAAGAGGTTCCATGTAACTCTTGGAACCCGCATGAGGATCGCTGCAGAATCTGCCGAGGCACTTGCGCATCTTCACTCGTTGCCACACCCTATAATCCACGGCGATGTGAAACCATCCAATATCCTACTTGCTGAGGGATTGATCGCAAAGGTGTCTGACTTTGGCTGCTCGACAATCGATGAGAATACTCAAGCTGTACCCAAAGGAACACCAGGGTATATTGATCCAGACTACCTACTAGAGTACCAACTCACATCTAAGAATGATGTATATAGTTTCGGAGTTATTCTTCTTGAGCTTCTAACTAGTAAGAAGCCGCTGTCAAAAGATAGGAAGAGCCTCACCTTGATGTTTCAGGAGGCAATGGCAGAGGGCACACTCTTTGAGCTCCTTGATAGTGACATGGTTGATGAAGCTAGTATGAGAGTGATGCATCAGGCAGCTGTTCTAGCAAGTCAATGCTTGGTTGTTCCAGGTATGACAAGGCCGACAATGGTGCTGGTGGCAGCGGAGCTCCGGCGCCTAGCACTAGCTGATGAAGTGCAACAATGCCCACAACCGCCGCTTGTACTTGAGGATTTGAGCTTTGTGGAGATGGGAAGCACAACCAGTGGAGTTTATAGCCTTGAGAAGAAAGCTGTGTTGAGCATAGAATTTGCAAGATGA
More
|
||||||||||
| Protein seq | MTSHRGLTTTTLCLAIAIAAELLAGRAEGQCQNTKCGDVEIPYPFSTSLDKCAASAFEFDCNDTGNGVYKPFYGNVEVLSVSLQLGQVRVMNHISSSCYNLSSKEMDSDTWQLNMTGTPFMLSDSNKFTVVGCRTQAYIADQDYVGKYMSGCVSVCRRGDVWKATNGTCSGIGCCQTAIPKGLDYYQAFFDDSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTTSEFNNTYDGRAPMVLDWAIRSANSCEEAWKKMDSYACKSTNSECFNSTNGPGYTCNCSKGYEGNPYLEGPNGCRDIDECQDSKTHHCYGECRNKPGGFDCNCPAGSKGNATIPDGCRKDFRLPLKARLAIGAVICVLVGLFSFLGWEVIRHKRSIKKQALLRQTHEFFLQHGGQLLLEMMKVEGNVGFTLYERGEIETATSNFNKEHIIGEGGQGTVYRAALNGVNVAIKKCKEIDESRKMEFVQELVILCRVRHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLHRSKRFHVTLGTRMRIAAESAEALAHLHSLPHPIIHGDVKPSNILLAEGLIAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVILLELLTSKKPLSKDRKSLTLMFQEAMAEGTLFELLDSDMVDEASMRVMHQAAVLASQCLVVPGMTRPTMVLVAAELRRLALADEVQQCPQPPLVLEDLSFVEMGSTTSGVYSLEKKAVLSIEFAR |
||||||||||
| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0368000 | Os04t0368000-01 | Chr04 | 17874313 | 17877280 | - | irgsp1_rep | ||
| CDS seq | ATGACTAGCCACAGAGGACTAACAACAACAACGCTGTGCCTCGCCATAGCGATTGCTGCAGAGCTCCTCGCTGGGAGAGCAGAGGGGCAATGCCAGAACACCAAGTGTGGCGACGTTGAGATCCCTTACCCATTCAGCACCAGCTTGGACAAGTGCGCCGCGTCCGCCTTCGAATTCGACTGCAACGACACCGGCAACGGCGTCTACAAGCCCTTCTACGGAAATGTGGAGGTGCTCAGCGTCTCCCTCCAGCTTGGCCAGGTCCGGGTGATGAATCACATCTCCTCTTCCTGCTACAACTTATCTTCTAAGGAGATGGACTCCGACACGTGGCAGCTCAACATGACTGGCACGCCGTTCATGCTCTCCGACTCCAACAAGTTCACGGTCGTCGGCTGCCGGACACAAGCCTACATCGCCGACCAGGATTACGTGGGGAAGTACATGAGCGGGTGCGTGTCCGTGTGCCGGCGAGGTGATGTGTGGAAGGCGACAAACGGCACCTGCTCCGGGATAGGCTGCTGCCAGACGGCCATCCCAAAGGGCCTGGATTACTACCAGGCCTTCTTCGACGACAGCAGCATGAACACGTCGGGGATCTACAACCGCACCCCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCGACCACCTACTTGACTACATCGGAATTCAACAACACCTATGATGGCCGGGCGCCTATGGTGCTCGATTGGGCCATCCGGAGCGCCAACAGTTGTGAGGAGGCATGGAAGAAGATGGACTCTTACGCGTGCAAAAGTACCAACAGCGAGTGCTTCAACTCAACCAACGGACCTGGCTACACCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCGAAGGACCCAACGGCTGTCGAGATATTGATGAATGTCAAGATTCCAAGACTCATCATTGCTATGGAGAATGCCGTAATAAACCTGGCGGTTTTGATTGTAACTGTCCAGCGGGCAGCAAAGGAAATGCTACCATTCCAGATGGATGCCGAAAAGACTTCCGCTTGCCGCTAAAAGCACGACTGGCAATTGGAGCGGTTATCTGCGTATTAGTTGGCCTCTTTAGTTTCCTTGGATGGGAAGTGATACGCCACAAAAGGAGCATAAAAAAACAAGCACTATTAAGACAGACTCATGAATTTTTTCTACAGCATGGTGGCCAGCTACTTCTGGAAATGATGAAAGTAGAGGGTAATGTTGGATTCACCCTCTATGAGAGAGGGGAGATTGAGACTGCCACAAGTAACTTCAACAAGGAACACATCATCGGTGAAGGTGGCCAGGGAACTGTTTATAGGGCGGCCTTGAACGGAGTTAATGTTGCAATAAAAAAGTGCAAGGAGATCGACGAGAGCAGAAAGATGGAATTTGTGCAGGAGTTGGTCATACTTTGCCGTGTCAGGCATCCCAACATTGTCAAGCTACTTGGATGTTGCCTCCAGTTTGAGGCGCCCATGCTTGTGTACGAGTTCGTGCAGAACAAAACACTACAAGAGTTACTAGATCTCCATAGGAGCAAGAGGTTCCATGTAACTCTTGGAACCCGCATGAGGATCGCTGCAGAATCTGCCGAGGCACTTGCGCATCTTCACTCGTTGCCACACCCTATAATCCACGGCGATGTGAAACCATCCAATATCCTACTTGCTGAGGGATTGATCGCAAAGGTGTCTGACTTTGGCTGCTCGACAATCGATGAGAATACTCAAGCTGTACCCAAAGGAACACCAGGGTATATTGATCCAGACTACCTACTAGAGTACCAACTCACATCTAAGAATGATGTATATAGTTTCGGAGTTATTCTTCTTGAGCTTCTAACTAGTAAGAAGCCGCTGTCAAAAGATAGGAAGAGCCTCACCTTGATGTTTCAGGAGGCAATGGCAGAGGGCACACTCTTTGAGCTCCTTGATAGTGACATGGTTGATGAAGCTAGTATGAGAGTGATGCATCAGGCAGCTGTTCTAGCAAGTCAATGCTTGGTTGTTCCAGGTATGACAAGGCCGACAATGGTGCTGGTGGCAGCGGAGCTCCGGCGCCTAGCACTAGCTGATGAAGTGCAACAATGCCCACAACCGCCGCTTGTACTTGAGGATTTGAGCTTTGTGGAGATGGGAAGCACAACCAGTGGAGTTTATAGCCTTGAGAAGAAAGCTGTGTTGAGCATAGAATTTGCAAGATGA
More
|
|||||||
| Protein seq | MTSHRGLTTTTLCLAIAIAAELLAGRAEGQCQNTKCGDVEIPYPFSTSLDKCAASAFEFDCNDTGNGVYKPFYGNVEVLSVSLQLGQVRVMNHISSSCYNLSSKEMDSDTWQLNMTGTPFMLSDSNKFTVVGCRTQAYIADQDYVGKYMSGCVSVCRRGDVWKATNGTCSGIGCCQTAIPKGLDYYQAFFDDSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTTSEFNNTYDGRAPMVLDWAIRSANSCEEAWKKMDSYACKSTNSECFNSTNGPGYTCNCSKGYEGNPYLEGPNGCRDIDECQDSKTHHCYGECRNKPGGFDCNCPAGSKGNATIPDGCRKDFRLPLKARLAIGAVICVLVGLFSFLGWEVIRHKRSIKKQALLRQTHEFFLQHGGQLLLEMMKVEGNVGFTLYERGEIETATSNFNKEHIIGEGGQGTVYRAALNGVNVAIKKCKEIDESRKMEFVQELVILCRVRHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLHRSKRFHVTLGTRMRIAAESAEALAHLHSLPHPIIHGDVKPSNILLAEGLIAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVILLELLTSKKPLSKDRKSLTLMFQEAMAEGTLFELLDSDMVDEASMRVMHQAAVLASQCLVVPGMTRPTMVLVAAELRRLALADEVQQCPQPPLVLEDLSFVEMGSTTSGVYSLEKKAVLSIEFAR
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0368000 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29960 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0370100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009920 | RBH | 0.0 | 5.225980 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010690 | RBH | 0.0 | 1.002613 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010500 | RBH | 0.0 | 2.579199 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010090 | RBH | 0.0 | 0.161385 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010320 | RBH | 0.0 | 6.872302 | 2.028062 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0294400 | RBH | 0.056573 | 1.716228 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0006250 | SBH | 0.0 | 0.060504 | 0.046490 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0280200 | RBH | 0.2874585 | 3.709664 | 0.0047405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | RBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0006300 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0006270 | SBH | 0.0 | 2.350280 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0006190 | SBH | 0.0 | 0.120069 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010250 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009380 | RBH | 0.0 | 0.833370 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009410 | RBH | 0.0 | 1.436895 | 0.0 |
