Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsZS97_04G0280200		OGI:04058110 \| 16/16			Zhenshan 97 \| ZS97RS3 \| HZAU			Chr04:19079500-19082467		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		WAK43, OsWAK43
DNA seq		CCAAACTAATAGCTGTGCTCACTTTGGAACTGTATAAATACCATCACTAGTTATTTTATTACAACTATGTTTATCTTCAATTCTATGCGCACCTAAATGCTACTATGCTATTTTACAGATTCAGTTCATCACTAGGAAGAAAACTCAATCTAACACACACCTACAAACCACGCGCGGGAATCAATACAACAAACTATCTGTAGATCATCTTGCAAATTCTATGCTCAACACAACTTTCTTCTCAAGGCTATAAACTCCACTGGTTGTGCTTCCCATCTCCACAAAGCTCAAATCCTCAAGTACAAGCGGCGGTTGTGGGCATTGTTGCACTTCATCAGCTAGTGCTAGGCGCCGGAGCTCCGCTGCCACTAGCACCATTGTCGGCCTTGTCATACCTGGAATAGCCAAGCATTGACTTGCTAGAATAGCTGCCTGATGCATCACTTTCATACTAGCTTCATCAACCATGTCACTATCAAGGAGCTCAAAGAGTGTGCCCTTTGCCATTGCCTCCTGAAACATCAAGGTGAGGCTCTTCCTATCTTTTGACAGCGGCTTCTTACTAGTTAGAAGCTCAAGAAGAATAACTCCGAAACTATATACATCATTCTTAGATGTGAGTTGGTACTCTAGTAGGTAGTCAGGATCAATATACCCTGGTGTTCCTTTGGGTACAGCTTGAGTATTCTCATCGATTGTCGAGCAGCCAAAGTCAGACACCTTTGCGATCAATCCCTCAGCAAGTAGGATATTGGCTGGCTTCACATCGCCGTGGATTATAGGGTGTGGCAACGAGTGAAGATGCGCAAGTGCCTCGGCAGATTCTGCAGCAATCCTCATGCGGGTTCCGAGAGTTACATGGAACCTCTTGCTCCTATGGAGATCTAGTAACTCTTGTAGTGTTTTGTTCTGCACGAACTCGTACACAAGCATGGGCGCCTCAAACTGGAGGCAACATCCAAGTAGCTTGACAATGTTGGGATGCCTGACACGGCAAAGTATGACCAACTCCTGCACAAATTCCATCTTTCTGCTCTCGTCGATCTCCTTGCACTTTTTTATTGCAACATCAACTCCGTTCAAGGCCGCCCTATAAACAGTTCCCTGGCCACCTTCACCGATGATGTGTCCCTTGTTGAAGTTACTCGTGGCAGTCTCAATCTCCCCTCTCTCATAGAGGGTGAATCCAACATTACCCTCTACTTTCATCATTTCCAGAAGTAGCTGGCCACCGTGCTGTAGAAAAAATTCATCAGTCTGTCTTAACAGTGCTTGTTTTTTTATGCTCCTTTTGTGGCGTATCACTTCCCATCCAAGGAAACTAAAGAGGCTAACTAATACGCAGATAACCGCTCCTGGATAAACAAATATCTGACATTAGTGGAAATATTTGAGCATGTGTGGGTTTTAACATGGATGTCGACCAGATATGCAGCAGTAAAACATAGTCTTAAAAAAAAGAGATAGTAAAACATGTGCCTACCAATTGCCAGTCGTGCTTTTAGTGGCAAGCTGAAGTCTTTTTGGCATCCATCTGGAATGGTAGCATTTCCTTTGCTGCCCGCTGGACAATTACAATCAAAACCGCCAGGTTTATTACGGCATTCTCCATAGCAATGATGAGTCTTGGGATTTTGACATTCATCAATATCTACAAAATAAAAATGACGAATTTGTAAGATGTGGAGAAAAGAATTTGGTAATCTGGAAAATGGAAACGTGGGAGAATTTCAAATATGAAATGGGAATGGAAAAAAGTCAGAATCATAAACAGACTACGTATAAATGGACCAACTAAACTTATTTCTTAAAAATATAGCCGGATGAAGTAAGAAAACAAAATCATGAAAGCTGCACGCTTAAAGCTGTTTCATATGAACTGTCACAATTTTAGAATTCTAGATGTAGTATTGATGGGATTATAGGAAAATTCACCTCGACAGCCGTTGGGTCCTCCGAGGTAAGGATTGCCTTCGTACCCTTTGGAGCAGTTGCAGATGTAGCCTGGTCCGTTGGTTGAGTTGAAGCACTCGCTGTTGGTATTTTTGCACGCGTAAGAGTCCATCTTCTTCCGCGCCTCCTGACAACTGTTGGCGCTCCGGATGGCCCAATCAAGCACCATAGGCGCTCGACCATCATAGGTGTTGTTAAATTCCGATGTAGTCAAGTAGGTGGTCGAGAAGGTGAAGTTGGAGGAGTCCATTAGCACCGCGTAGCTGCAGGGGGTGCGGTTGTAGATCCCCGACGTGTTCATGCTGCTGTCGTCGAAGAAGGCCTGGTAGTAATCCAGGCCCTTTGGGATGGCCGTCTGGCAGCAGCCTATCCCGGAGCAGGTGCCGTTTGTCGCCTTCCACACATCACCTCGCCGGCACACGGATACGCATCCGCTCATGTACTTCCCCACGTAATCCTGGTCGGCGATGTAGGCTTGTGTCCGGCAGCCGACGACCGTGAACTTGTTGGAGTCGGAGAGCATGAACGGCGAGCCAGTCATGTTGAGCTCCCACGTGTCGGAGTGCATATCTTTAGAAGATAAGTTGTAGCAGGAAGAGGAGATGTGATTCATCACCCGGACCTGGCCAAGCTGGAGGGAGACGCTGAGCACCTCCACATTTCCGTAGAAGGGCTTGTAGACGCCGTTGCCGGTGTCGTTGCAGTCGAATTCGAAGGCGGACGCGGCGCACTTGTCCAAGCTGGTGCTGAATGGGTAAGGGATCTCAACGTCGCCACACTTGGTGTTCTGGCATTGCCCCTCTGCTCTCCCAGCGAGGAGCTCTGCAGCAATCGCTATGGCGAGGCACAGCGTTGTTGTTGTTAGTCCTCTGTGGCTAGTCATGGTGGATGGGTGAACTAGCTAGTCCTAGCTATCTGTTTGTGTCTTAAACCTCTGTTTCTTGATAGGTGATTATGGACTTGTGCTTGTATATGAAGATGAGCAGAGCCAGCGTTGAGAATTTGAGATGAATCC More
CDS seq		ATGACTAGCCACAGAGGACTAACAACAACAACGCTGTGCCTCGCCATAGCGATTGCTGCAGAGCTCCTCGCTGGGAGAGCAGAGGGGCAATGCCAGAACACCAAGTGTGGCGACGTTGAGATCCCTTACCCATTCAGCACCAGCTTGGACAAGTGCGCCGCGTCCGCCTTCGAATTCGACTGCAACGACACCGGCAACGGCGTCTACAAGCCCTTCTACGGAAATGTGGAGGTGCTCAGCGTCTCCCTCCAGCTTGGCCAGGTCCGGGTGATGAATCACATCTCCTCTTCCTGCTACAACTTATCTTCTAAAGATATGCACTCCGACACGTGGGAGCTCAACATGACTGGCTCGCCGTTCATGCTCTCCGACTCCAACAAGTTCACGGTCGTCGGCTGCCGGACACAAGCCTACATCGCCGACCAGGATTACGTGGGGAAGTACATGAGCGGATGCGTATCCGTGTGCCGGCGAGGTGATGTGTGGAAGGCGACAAACGGCACCTGCTCCGGGATAGGCTGCTGCCAGACGGCCATCCCAAAGGGCCTGGATTACTACCAGGCCTTCTTCGACGACAGCAGCATGAACACGTCGGGGATCTACAACCGCACCCCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCGACCACCTACTTGACTACATCGGAATTTAACAACACCTATGATGGTCGAGCGCCTATGGTGCTTGATTGGGCCATCCGGAGCGCCAACAGTTGTCAGGAGGCGCGGAAGAAGATGGACTCTTACGCGTGCAAAAATACCAACAGCGAGTGCTTCAACTCAACCAACGGACCAGGCTACATCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCGGAGGACCCAACGGCTGTCGAGATATTGATGAATGTCAAAATCCCAAGACTCATCATTGCTATGGAGAATGCCGTAATAAACCTGGCGGTTTTGATTGTAATTGTCCAGCGGGCAGCAAAGGAAATGCTACCATTCCAGATGGATGCCAAAAAGACTTCAGCTTGCCACTAAAAGCACGACTGGCAATTGGAGCGGTTATCTGCGTATTAGTTAGCCTCTTTAGTTTCCTTGGATGGGAAGTGATACGCCACAAAAGGAGCATAAAAAAACAAGCACTGTTAAGACAGACTGATGAATTTTTTCTACAGCACGGTGGCCAGCTACTTCTGGAAATGATGAAAGTAGAGGGTAATGTTGGATTCACCCTCTATGAGAGAGGGGAGATTGAGACTGCCACGAGTAACTTCAACAAGGGACACATCATCGGTGAAGGTGGCCAGGGAACTGTTTATAGGGCGGCCTTGAACGGAGTTGATGTTGCAATAAAAAAGTGCAAGGAGATCGACGAGAGCAGAAAGATGGAATTTGTGCAGGAGTTGGTCATACTTTGCCGTGTCAGGCATCCCAACATTGTCAAGCTACTTGGATGTTGCCTCCAGTTTGAGGCGCCCATGCTTGTGTACGAGTTCGTGCAGAACAAAACACTACAAGAGTTACTAGATCTCCATAGGAGCAAGAGGTTCCATGTAACTCTCGGAACCCGCATGAGGATTGCTGCAGAATCTGCCGAGGCACTTGCGCATCTTCACTCGTTGCCACACCCTATAATCCACGGCGATGTGAAGCCAGCCAATATCCTACTTGCTGAGGGATTGATCGCAAAGGTGTCTGACTTTGGCTGCTCGACAATCGATGAGAATACTCAAGCTGTACCCAAAGGAACACCAGGGTATATTGATCCTGACTACCTACTAGAGTACCAACTCACATCTAAGAATGATGTATATAGTTTCGGAGTTATTCTTCTTGAGCTTCTAACTAGTAAGAAGCCGCTGTCAAAAGATAGGAAGAGCCTCACCTTGATGTTTCAGGAGGCAATGGCAAAGGGCACACTCTTTGAGCTCCTTGATAGTGACATGGTTGATGAAGCTAGTATGAAAGTGATGCATCAGGCAGCTATTCTAGCAAGTCAATGCTTGGCTATTCCAGGTATGACAAGGCCGACAATGGTGCTAGTGGCAGCGGAGCTCCGGCGCCTAGCACTAGCTGATGAAGTGCAACAATGCCCACAACCGCCGCTTGTACTTGAGGATTTGAGCTTTGTGGAGATGGGAAGCACAACCAGTGGAGTTTATAGCCTTGAGAAGAAAGTTGTGTTGAGCATAGAATTTGCAAGATGA More
Protein seq		MTSHRGLTTTTLCLAIAIAAELLAGRAEGQCQNTKCGDVEIPYPFSTSLDKCAASAFEFDCNDTGNGVYKPFYGNVEVLSVSLQLGQVRVMNHISSSCYNLSSKDMHSDTWELNMTGSPFMLSDSNKFTVVGCRTQAYIADQDYVGKYMSGCVSVCRRGDVWKATNGTCSGIGCCQTAIPKGLDYYQAFFDDSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTTSEFNNTYDGRAPMVLDWAIRSANSCQEARKKMDSYACKNTNSECFNSTNGPGYICNCSKGYEGNPYLGGPNGCRDIDECQNPKTHHCYGECRNKPGGFDCNCPAGSKGNATIPDGCQKDFSLPLKARLAIGAVICVLVSLFSFLGWEVIRHKRSIKKQALLRQTDEFFLQHGGQLLLEMMKVEGNVGFTLYERGEIETATSNFNKGHIIGEGGQGTVYRAALNGVDVAIKKCKEIDESRKMEFVQELVILCRVRHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLHRSKRFHVTLGTRMRIAAESAEALAHLHSLPHPIIHGDVKPANILLAEGLIAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVILLELLTSKKPLSKDRKSLTLMFQEAMAKGTLFELLDSDMVDEASMKVMHQAAILASQCLAIPGMTRPTMVLVAAELRRLALADEVQQCPQPPLVLEDLSFVEMGSTTSGVYSLEKKVVLSIEFAR
Function		Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0280200	OsZS97_04T0280200-mRNA-1	Chr04	19079500	19082467	-	makerRMon
CDS seq	ATGACTAGCCACAGAGGACTAACAACAACAACGCTGTGCCTCGCCATAGCGATTGCTGCAGAGCTCCTCGCTGGGAGAGCAGAGGGGCAATGCCAGAACACCAAGTGTGGCGACGTTGAGATCCCTTACCCATTCAGCACCAGCTTGGACAAGTGCGCCGCGTCCGCCTTCGAATTCGACTGCAACGACACCGGCAACGGCGTCTACAAGCCCTTCTACGGAAATGTGGAGGTGCTCAGCGTCTCCCTCCAGCTTGGCCAGGTCCGGGTGATGAATCACATCTCCTCTTCCTGCTACAACTTATCTTCTAAAGATATGCACTCCGACACGTGGGAGCTCAACATGACTGGCTCGCCGTTCATGCTCTCCGACTCCAACAAGTTCACGGTCGTCGGCTGCCGGACACAAGCCTACATCGCCGACCAGGATTACGTGGGGAAGTACATGAGCGGATGCGTATCCGTGTGCCGGCGAGGTGATGTGTGGAAGGCGACAAACGGCACCTGCTCCGGGATAGGCTGCTGCCAGACGGCCATCCCAAAGGGCCTGGATTACTACCAGGCCTTCTTCGACGACAGCAGCATGAACACGTCGGGGATCTACAACCGCACCCCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCGACCACCTACTTGACTACATCGGAATTTAACAACACCTATGATGGTCGAGCGCCTATGGTGCTTGATTGGGCCATCCGGAGCGCCAACAGTTGTCAGGAGGCGCGGAAGAAGATGGACTCTTACGCGTGCAAAAATACCAACAGCGAGTGCTTCAACTCAACCAACGGACCAGGCTACATCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCGGAGGACCCAACGGCTGTCGAGATATTGATGAATGTCAAAATCCCAAGACTCATCATTGCTATGGAGAATGCCGTAATAAACCTGGCGGTTTTGATTGTAATTGTCCAGCGGGCAGCAAAGGAAATGCTACCATTCCAGATGGATGCCAAAAAGACTTCAGCTTGCCACTAAAAGCACGACTGGCAATTGGAGCGGTTATCTGCGTATTAGTTAGCCTCTTTAGTTTCCTTGGATGGGAAGTGATACGCCACAAAAGGAGCATAAAAAAACAAGCACTGTTAAGACAGACTGATGAATTTTTTCTACAGCACGGTGGCCAGCTACTTCTGGAAATGATGAAAGTAGAGGGTAATGTTGGATTCACCCTCTATGAGAGAGGGGAGATTGAGACTGCCACGAGTAACTTCAACAAGGGACACATCATCGGTGAAGGTGGCCAGGGAACTGTTTATAGGGCGGCCTTGAACGGAGTTGATGTTGCAATAAAAAAGTGCAAGGAGATCGACGAGAGCAGAAAGATGGAATTTGTGCAGGAGTTGGTCATACTTTGCCGTGTCAGGCATCCCAACATTGTCAAGCTACTTGGATGTTGCCTCCAGTTTGAGGCGCCCATGCTTGTGTACGAGTTCGTGCAGAACAAAACACTACAAGAGTTACTAGATCTCCATAGGAGCAAGAGGTTCCATGTAACTCTCGGAACCCGCATGAGGATTGCTGCAGAATCTGCCGAGGCACTTGCGCATCTTCACTCGTTGCCACACCCTATAATCCACGGCGATGTGAAGCCAGCCAATATCCTACTTGCTGAGGGATTGATCGCAAAGGTGTCTGACTTTGGCTGCTCGACAATCGATGAGAATACTCAAGCTGTACCCAAAGGAACACCAGGGTATATTGATCCTGACTACCTACTAGAGTACCAACTCACATCTAAGAATGATGTATATAGTTTCGGAGTTATTCTTCTTGAGCTTCTAACTAGTAAGAAGCCGCTGTCAAAAGATAGGAAGAGCCTCACCTTGATGTTTCAGGAGGCAATGGCAAAGGGCACACTCTTTGAGCTCCTTGATAGTGACATGGTTGATGAAGCTAGTATGAAAGTGATGCATCAGGCAGCTATTCTAGCAAGTCAATGCTTGGCTATTCCAGGTATGACAAGGCCGACAATGGTGCTAGTGGCAGCGGAGCTCCGGCGCCTAGCACTAGCTGATGAAGTGCAACAATGCCCACAACCGCCGCTTGTACTTGAGGATTTGAGCTTTGTGGAGATGGGAAGCACAACCAGTGGAGTTTATAGCCTTGAGAAGAAAGTTGTGTTGAGCATAGAATTTGCAAGATGA More
Protein seq	MTSHRGLTTTTLCLAIAIAAELLAGRAEGQCQNTKCGDVEIPYPFSTSLDKCAASAFEFDCNDTGNGVYKPFYGNVEVLSVSLQLGQVRVMNHISSSCYNLSSKDMHSDTWELNMTGSPFMLSDSNKFTVVGCRTQAYIADQDYVGKYMSGCVSVCRRGDVWKATNGTCSGIGCCQTAIPKGLDYYQAFFDDSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTTSEFNNTYDGRAPMVLDWAIRSANSCQEARKKMDSYACKNTNSECFNSTNGPGYICNCSKGYEGNPYLGGPNGCRDIDECQNPKTHHCYGECRNKPGGFDCNCPAGSKGNATIPDGCQKDFSLPLKARLAIGAVICVLVSLFSFLGWEVIRHKRSIKKQALLRQTDEFFLQHGGQLLLEMMKVEGNVGFTLYERGEIETATSNFNKGHIIGEGGQGTVYRAALNGVDVAIKKCKEIDESRKMEFVQELVILCRVRHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLHRSKRFHVTLGTRMRIAAESAEALAHLHSLPHPIIHGDVKPANILLAEGLIAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVILLELLTSKKPLSKDRKSLTLMFQEAMAKGTLFELLDSDMVDEASMKVMHQAAILASQCLAIPGMTRPTMVLVAAELRRLALADEVQQCPQPPLVLEDLSFVEMGSTTSGVYSLEKKVVLSIEFAR More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsZS97_04G0280200	OsZS97_04T0280200-mRNA-2	Chr04	19079500	19082467	-	makerRMon
CDS seq	ATGACTAGCCACAGAGGACTAACAACAACAACGCTGTGCCTCGCCATAGCGATTGCTGCAGAGCTCCTCGCTGGGAGAGCAGAGGGGCAATGCCAGAACACCAAGTGTGGCGACGTTGAGATCCCTTACCCATTCAGCACCAGCTTGGACAAGTGCGCCGCGTCCGCCTTCGAATTCGACTGCAACGACACCGGCAACGGCGTCTACAAGCCCTTCTACGGAAATGTGGAGGTGCTCAGCGTCTCCCTCCAGCTTGGCCAGGTCCGGGTGATGAATCACATCTCCTCTTCCTGCTACAACTTATCTTCTAAAGATATGCACTCCGACACGTGGGAGCTCAACATGACTGGCTCGCCGTTCATGCTCTCCGACTCCAACAAGTTCACGGTCGTCGGCTGCCGGACACAAGCCTACATCGCCGACCAGGATTACGTGGGGAAGTACATGAGCGGATGCGTATCCGTGTGCCGGCGAGGTGATGTGTGGAAGGCGACAAACGGCACCTGCTCCGGGATAGGCTGCTGCCAGACGGCCATCCCAAAGGGCCTGGATTACTACCAGGCCTTCTTCGACGACAGCAGCATGAACACGTCGGGGATCTACAACCGCACCCCCTGCAGCTACGCGGTGCTAATGGACTCCTCCAACTTCACCTTCTCGACCACCTACTTGACTACATCGGAATTTAACAACACCTATGATGGTCGAGCGCCTATGGTGCTTGATTGGGCCATCCGGAGCGCCAACAGTTGTCAGGAGGCGCGGAAGAAGATGGACTCTTACGCGTGCAAAAATACCAACAGCGAGTGCTTCAACTCAACCAACGGACCAGGCTACATCTGCAACTGCTCCAAAGGGTACGAAGGCAATCCTTACCTCGGAGGACCCAACGGCTGTCGAGGAGCGGTTATCTGCGTATTAGTTAGCCTCTTTAGTTTCCTTGGATGGGAAGTGATACGCCACAAAAGGAGCATAAAAAAACAAGCACTGTTAAGACAGACTGATGAATTTTTTCTACAGCACGGTGGCCAGCTACTTCTGGAAATGATGAAAGTAGAGGGTAATGTTGGATTCACCCTCTATGAGAGAGGGGAGATTGAGACTGCCACGAGTAACTTCAACAAGGGACACATCATCGGTGAAGGTGGCCAGGGAACTGTTTATAGGGCGGCCTTGAACGGAGTTGATGTTGCAATAAAAAAGTGCAAGGAGATCGACGAGAGCAGAAAGATGGAATTTGTGCAGGAGTTGGTCATACTTTGCCGTGTCAGGCATCCCAACATTGTCAAGCTACTTGGATGTTGCCTCCAGTTTGAGGCGCCCATGCTTGTGTACGAGTTCGTGCAGAACAAAACACTACAAGAGTTACTAGATCTCCATAGGAGCAAGAGGTTCCATGTAACTCTCGGAACCCGCATGAGGATTGCTGCAGAATCTGCCGAGGCACTTGCGCATCTTCACTCGTTGCCACACCCTATAATCCACGGCGATGTGAAGCCAGCCAATATCCTACTTGCTGAGGGATTGATCGCAAAGGTGTCTGACTTTGGCTGCTCGACAATCGATGAGAATACTCAAGCTGTACCCAAAGGAACACCAGGGTATATTGATCCTGACTACCTACTAGAGTACCAACTCACATCTAAGAATGATGTATATAGTTTCGGAGTTATTCTTCTTGAGCTTCTAACTAGTAAGAAGCCGCTGTCAAAAGATAGGAAGAGCCTCACCTTGATGTTTCAGGAGGCAATGGCAAAGGGCACACTCTTTGAGCTCCTTGATAGTGACATGGTTGATGAAGCTAGTATGAAAGTGATGCATCAGGCAGCTATTCTAGCAAGTCAATGCTTGGCTATTCCAGGTATGACAAGGCCGACAATGGTGCTAGTGGCAGCGGAGCTCCGGCGCCTAGCACTAGCTGATGAAGTGCAACAATGCCCACAACCGCCGCTTGTACTTGAGGATTTGAGCTTTGTGGAGATGGGAAGCACAACCAGTGGAGTTTATAGCCTTGAGAAGAAAGTTGTGTTGAGCATAGAATTTGCAAGATGA More
Protein seq	MTSHRGLTTTTLCLAIAIAAELLAGRAEGQCQNTKCGDVEIPYPFSTSLDKCAASAFEFDCNDTGNGVYKPFYGNVEVLSVSLQLGQVRVMNHISSSCYNLSSKDMHSDTWELNMTGSPFMLSDSNKFTVVGCRTQAYIADQDYVGKYMSGCVSVCRRGDVWKATNGTCSGIGCCQTAIPKGLDYYQAFFDDSSMNTSGIYNRTPCSYAVLMDSSNFTFSTTYLTTSEFNNTYDGRAPMVLDWAIRSANSCQEARKKMDSYACKNTNSECFNSTNGPGYICNCSKGYEGNPYLGGPNGCRGAVICVLVSLFSFLGWEVIRHKRSIKKQALLRQTDEFFLQHGGQLLLEMMKVEGNVGFTLYERGEIETATSNFNKGHIIGEGGQGTVYRAALNGVDVAIKKCKEIDESRKMEFVQELVILCRVRHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLHRSKRFHVTLGTRMRIAAESAEALAHLHSLPHPIIHGDVKPANILLAEGLIAKVSDFGCSTIDENTQAVPKGTPGYIDPDYLLEYQLTSKNDVYSFGVILLELLTSKKPLSKDRKSLTLMFQEAMAKGTLFELLDSDMVDEASMKVMHQAAILASQCLAIPGMTRPTMVLVAAELRRLALADEVQQCPQPPLVLEDLSFVEMGSTTSGVYSLEKKVVLSIEFAR More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.2874585	3.709664	0.0047405

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_04g0368000	RBH	0.0	0.000000	0.0
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os04g29960	RBH	0.0	0.000000	0.0
Nipponbare \| IRGSP 1.0 \| RAP-db	Os04g0368000	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_04g0009920	RBH	0.0	5.225980	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_04g0010690	RBH	0.0	1.002613	0.0
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_04g0010500	RBH	0.0	2.579199	0.000000
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_04g0010090	RBH	0.0	0.161385	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_04g0010320	RBH	0.0	6.872302	2.028062
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_04G0294400	RBH	0.056573	1.716228	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_04g0010030	RBH	0.0	0.000000	0.0
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_04G0281200	SBH	0.345818	0.308578	0.044118
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_04g0010110	SBH	0.018769	0.212470	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_04g0010220	RBH	0.0	1.179976	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_04g0010270	RBH	0.0	0.0	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_04g0010770	RBH	0.0	0.0	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_04g0010250	RBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_04G009380	RBH	0.0	0.833370	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_04g0009480	SBH	0.0	0.0	0.0

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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