Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0010150 | OGI:04058150 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:19367219-19369964 | ||||||||
| Gene Symbol | WAK48, OsWAK48 | ||||||||||
| DNA seq | tcatctcgcaaactctatactcaacacagctttcttctctcggctataagccccacttgtcccactctctccatacaaagtgttcgttgtactgcccatatccataaatctcatatcctcgagcaccaatggtggctgtgggcttcgctgcacttcatctgctaccgctaatcggcggagctccaccgccaatagtatcattgatggccttgttgtacctggaacaaccaagcattgactcactagatctgcagcctcattgatcaccttcatgctagtttcatcaacaatgtcgctgtcaaggagctcaatgagtgtgccattggccatagcctcctggaacatcagtgttaagcttttcctttcttttgatagtggcctcctaccggttagaagctcgagaagaatgactccgaagctatatacatcatttttggtcgtgagttggtactcaagtagatagtccgggtcaatataccctggtgtgcctttgagtacaacctgagttctctcatcaatcgttgaacatccaaaatcagacacctttgcaaccaagccatttgcaagaaggatgttggctgtcttcacatcgccatggagtattgggtgcggcagagagtgtagatgtgaaagtgcatctgcggattcagcagcaatccttaggcgggttcccagtgtgacatggaaccgcctactcctctgaagatctagcagctcttgtagtgttttgttctgtacaaactcgtacacaagcatcggtgcctcaaattggaggcaacaaccaagcagcttgacaatgttgggatgattaacacgacaaagtatgaccagctcctgcacaaactccatcttcctgctctcgtcaatctccttgcacttctttattgcgacgtcaactccgtctataacagccctgtaaactgttccttgccctccttccccgatgatgtgtgccttgttaaagttctttgtggcaatctcgatctcccctctattgtatagggtgaacccatcgtttccatctgctttcatcatttctagcaatatctggcctccatgttgctgaaaaaactcgtcGgtctgtcttaatagagcctgttgtttaaTtttttgtttgtgccgaatcacttcccatcctagaaaaccaaagagaccagccaatacactggcaacaactcctatgcaaacaaagatatgtggttaccaaagtgttttgaaattgatatacttaaacaaagatcaagcagatcatataagatcacgatcaattagatcaagatggggcaaacagaatgttggaataagtgtgtaccaattgccactcgtgtttttggtgctaagaagtcttttcggcatcctccttgaatagcggcatttccactgctacccacaggacacagacaatcgaatctgccaagtttattgtagcaatctccatagcaagggtaattttctcgatgttgacattcatcaatgtctacaaccaaatgtaaggtttttttttagaaaaatataacgttacgtgcatctgtAaaaaatttacatgaagatacacgattgacttagtgaataatcaattaatgagcttattagcctttagcccatgctctattcctcattgttttttgtggtcacttaccatgatccccctaccaagttaaagttcgaatgaaacatacttattaacaaagttgcttataaaacagctattttatactagttatcaagaaatactacttagttgagtataatcacaatttcaaatttctggctatgattggggagtaaaggaaagttcaccttgacagccgttgggaccttgaatgtaaggattgccttggtatccttgagagcagttgcagatatagcctagtccattggtggagttgatgcacatgctgttatcgcttttgcacgcgtatgatgtaagatttttcttcgcttccatgcagttattggcagtctgaatggcccaatcaagcacgaccggcgcctggccgccataggagttgttgaactcaaggggcgatgtcaggtaggtagttgagaacgtgaagttggacgcttccatgagcaccgcgtagctacaaggagtcttgtagaagatccctgacgtgttcatgctttcttcccaaatggcctggtagtaatccaagcccttcgggatggttgtttggcagcagcctttcccagagcagacaccgtcaatcacgccggtcagctcacctcgccggcagacggacacacagccgctcatgtaccttcccacgttgtcctggtcggcgatgtaagccagcgttcggcacccgatgaccgtgaacttgttggcagtgtcggagaacctgaatgggctgcccaatttcatccaccacctgtagaagttcaTtttgttggacgagaagttgtagcaggcataagatatgtgattccgcacacgggcctgagcgagctggacatcgatgctgaggaggtcgacagttccaaggaatggcttgaggacgccgttgccggtgtcgttgcagtggactacgaagccaggcgccatagcgcagccggttgaatagaggccgaacggataggggatgtctacgccgccgcacttggtgttctggcattccgccgttgcctctgcggcgaggggctcggctgccagcgccgtgccgagcaatagcagcgacggccaaacatttcgatagaacgcggcgcgaatagcacccacacctgctcctcctcggtggggagacat
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| CDS seq | atgtctccccaccgaggaggagcaggtgtgggtgctattcgcgccgcgttctatcgaaatgtttggccgtcgctgctattgctcggcacggcgctggcagccgagcccctcgccgcagaggcaacggcggaatgccagaacaccaagtgcggcggcgtagacatcccctatccgttcggcctctattcaaccggctgcgctatggcgcctggcttcgtagtccactgcaacgacaccggcaacggcgtcctcaagccattccttggaactgtcgacctcctcagcatcgatgtccagctcgctcaggcccgtgtgcggaatcacatatcttatgcctgctacaacttctcgtccaacaaaAtgaacttctacaggtggtggatgaaattgggcagcccattcaggttctccgacactgccaacaagttcacggtcatcgggtgccgaacgctggcttacatcgccgaccaggacaacgtgggaaggtacatgagcggctgtgtgtccgtctgccggcgaggtgagctgaccggcgtgattgacggtgtctgctctgggaaaggctgctgccaaacaaccatcccgaagggcttggattactaccaggccatttgggaagaaagcatgaacacgtcagggatcttctacaagactccttgtagctacgcggtgctcatggaagcgtccaacttcacgttctcaactacctacctgacatcgccccttgagttcaacaactcctatggcggccaggcgccggtcgtgcttgattgggccattcagactgccaataactgcatggaagcgaagaaaaatcttacatcatacgcgtgcaaaagcgataacagcatgtgcatcaactccaccaatggactaggctatatctgcaactgctctcaaggataccaaggcaatccttacattcaaggtcccaacggctgtcaaggagttgttgccagtgtattggctggtctctttggttttctaggatgggaagtgattcggcacaaacaaaaaAttaaacaacaggctctattaagacagacCgacgagttttttcagcaacatggaggccagatattgctagaaatgatgaaagcagatggaaacgatgggttcaccctatacaatagaggggagatcgagattgccacaaagaactttaacaaggcacacatcatcggggaaggagggcaaggaacagtttacagggctgttatagacggagttgacgtcgcaataaagaagtgcaaggagattgacgagagcaggaagatggagtttgtgcaggagctggtcatactttgtcgtgttaatcatcccaacattgtcaagctgcttggttgttgcctccaatttgaggcaccgatgcttgtgtacgagtttgtacagaacaaaacactacaagagctgctagatcttcagaggagtaggcggttccatgtcacactgggaacccgcctaaggattgctgctgaatccgcagatgcactttcacatctacactctctgccgcacccaatactccatggcgatgtgaagacagccaacatccttcttgcaaatggcttggttgcaaaggtgtctgattttggatgttcaacgattgatgagagaactcaggttgtactcaaaggcacaccagggtatattgacccggactatctacttgagtaccaactcacgaccaaaaatgatgtatatagcttcggagtcattcttctcgagcttctaaccggtaggaggccactatcaaaagaaaggaaaagcttaacactgatgttccaggaggctatggccaatggcacactcattgagctccttgacagcgacattgttgatgaaactagcatgaaggtgatcaatgaggctgcagatctagtgagtcaatgcttggttgttccaggtacaacaaggccatcaatgatactattggcggtggagctccgccgattagcggtagcagatgaagtgcagcgaagcccacagccaccattggtgctcgaggatatgagatttatggatatgggcagtacaacgaacactttgtatggagagagtgggacaagtggggcttatagccgagagaagaaagctgtgttgagtatagagtttgcgagatga
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| Protein seq | MSPHRGGAGVGAIRAAFYRNVWPSLLLLGTALAAEPLAAEATAECQNTKCGGVDIPYPFGLYSTGCAMAPGFVVHCNDTGNGVLKPFLGTVDLLSIDVQLAQARVRNHISYACYNFSSNKMNFYRWWMKLGSPFRFSDTANKFTVIGCRTLAYIADQDNVGRYMSGCVSVCRRGELTGVIDGVCSGKGCCQTTIPKGLDYYQAIWEESMNTSGIFYKTPCSYAVLMEASNFTFSTTYLTSPLEFNNSYGGQAPVVLDWAIQTANNCMEAKKNLTSYACKSDNSMCINSTNGLGYICNCSQGYQGNPYIQGPNGCQGVVASVLAGLFGFLGWEVIRHKQKIKQQALLRQTDEFFQQHGGQILLEMMKADGNDGFTLYNRGEIEIATKNFNKAHIIGEGGQGTVYRAVIDGVDVAIKKCKEIDESRKMEFVQELVILCRVNHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLQRSRRFHVTLGTRLRIAAESADALSHLHSLPHPILHGDVKTANILLANGLVAKVSDFGCSTIDERTQVVLKGTPGYIDPDYLLEYQLTTKNDVYSFGVILLELLTGRRPLSKERKSLTLMFQEAMANGTLIELLDSDIVDETSMKVINEAADLVSQCLVVPGTTRPSMILLAVELRRLAVADEVQRSPQPPLVLEDMRFMDMGSTTNTLYGESGTSGAYSREKKAVLSIEFAR |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0010150 | OsLima_04g0010150.01 | Chr04 | 19367219 | 19369964 | - | NAM | ||
| CDS seq | atgtctccccaccgaggaggagcaggtgtgggtgctattcgcgccgcgttctatcgaaatgtttggccgtcgctgctattgctcggcacggcgctggcagccgagcccctcgccgcagaggcaacggcggaatgccagaacaccaagtgcggcggcgtagacatcccctatccgttcggcctctattcaaccggctgcgctatggcgcctggcttcgtagtccactgcaacgacaccggcaacggcgtcctcaagccattccttggaactgtcgacctcctcagcatcgatgtccagctcgctcaggcccgtgtgcggaatcacatatcttatgcctgctacaacttctcgtccaacaaaAtgaacttctacaggtggtggatgaaattgggcagcccattcaggttctccgacactgccaacaagttcacggtcatcgggtgccgaacgctggcttacatcgccgaccaggacaacgtgggaaggtacatgagcggctgtgtgtccgtctgccggcgaggtgagctgaccggcgtgattgacggtgtctgctctgggaaaggctgctgccaaacaaccatcccgaagggcttggattactaccaggccatttgggaagaaagcatgaacacgtcagggatcttctacaagactccttgtagctacgcggtgctcatggaagcgtccaacttcacgttctcaactacctacctgacatcgccccttgagttcaacaactcctatggcggccaggcgccggtcgtgcttgattgggccattcagactgccaataactgcatggaagcgaagaaaaatcttacatcatacgcgtgcaaaagcgataacagcatgtgcatcaactccaccaatggactaggctatatctgcaactgctctcaaggataccaaggcaatccttacattcaaggtcccaacggctgtcaaggagttgttgccagtgtattggctggtctctttggttttctaggatgggaagtgattcggcacaaacaaaaaAttaaacaacaggctctattaagacagacCgacgagttttttcagcaacatggaggccagatattgctagaaatgatgaaagcagatggaaacgatgggttcaccctatacaatagaggggagatcgagattgccacaaagaactttaacaaggcacacatcatcggggaaggagggcaaggaacagtttacagggctgttatagacggagttgacgtcgcaataaagaagtgcaaggagattgacgagagcaggaagatggagtttgtgcaggagctggtcatactttgtcgtgttaatcatcccaacattgtcaagctgcttggttgttgcctccaatttgaggcaccgatgcttgtgtacgagtttgtacagaacaaaacactacaagagctgctagatcttcagaggagtaggcggttccatgtcacactgggaacccgcctaaggattgctgctgaatccgcagatgcactttcacatctacactctctgccgcacccaatactccatggcgatgtgaagacagccaacatccttcttgcaaatggcttggttgcaaaggtgtctgattttggatgttcaacgattgatgagagaactcaggttgtactcaaaggcacaccagggtatattgacccggactatctacttgagtaccaactcacgaccaaaaatgatgtatatagcttcggagtcattcttctcgagcttctaaccggtaggaggccactatcaaaagaaaggaaaagcttaacactgatgttccaggaggctatggccaatggcacactcattgagctccttgacagcgacattgttgatgaaactagcatgaaggtgatcaatgaggctgcagatctagtgagtcaatgcttggttgttccaggtacaacaaggccatcaatgatactattggcggtggagctccgccgattagcggtagcagatgaagtgcagcgaagcccacagccaccattggtgctcgaggatatgagatttatggatatgggcagtacaacgaacactttgtatggagagagtgggacaagtggggcttatagccgagagaagaaagctgtgttgagtatagagtttgcgagatga
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| Protein seq | MSPHRGGAGVGAIRAAFYRNVWPSLLLLGTALAAEPLAAEATAECQNTKCGGVDIPYPFGLYSTGCAMAPGFVVHCNDTGNGVLKPFLGTVDLLSIDVQLAQARVRNHISYACYNFSSNKMNFYRWWMKLGSPFRFSDTANKFTVIGCRTLAYIADQDNVGRYMSGCVSVCRRGELTGVIDGVCSGKGCCQTTIPKGLDYYQAIWEESMNTSGIFYKTPCSYAVLMEASNFTFSTTYLTSPLEFNNSYGGQAPVVLDWAIQTANNCMEAKKNLTSYACKSDNSMCINSTNGLGYICNCSQGYQGNPYIQGPNGCQGVVASVLAGLFGFLGWEVIRHKQKIKQQALLRQTDEFFQQHGGQILLEMMKADGNDGFTLYNRGEIEIATKNFNKAHIIGEGGQGTVYRAVIDGVDVAIKKCKEIDESRKMEFVQELVILCRVNHPNIVKLLGCCLQFEAPMLVYEFVQNKTLQELLDLQRSRRFHVTLGTRLRIAAESADALSHLHSLPHPILHGDVKTANILLANGLVAKVSDFGCSTIDERTQVVLKGTPGYIDPDYLLEYQLTTKNDVYSFGVILLELLTGRRPLSKERKSLTLMFQEAMANGTLIELLDSDIVDETSMKVINEAADLVSQCLVVPGTTRPSMILLAVELRRLAVADEVQRSPQPPLVLEDMRFMDMGSTTNTLYGESGTSGAYSREKKAVLSIEFAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.039004 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0370100 | SBH | 0.0 | 0.0 | 0.898808 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g30160 | SBH | 0.0 | 0.0 | 0.231371 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0370100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0010030 | SBH | 0.0 | 0.0 | 0.717448 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010660 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010500 | SBH | 0.0 | 2.579199 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0010070 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0010410 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0293800 | SBH | 0.109127 | 0.749809 | 0.005102 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010040 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0283400 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0010110 | SBH | 0.018769 | 0.212470 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0010230 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0010280 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0010700 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0010210 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G009360 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0009520 | SBH | 0.0 | 0.000000 | 0.740764 |
