Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os04g14570 | OGI:04027980 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr04:8166743-8171255 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTAATATACTCGGTTGGCCTCCTTCGGCCTTCCCGGCGAAAAAAAGAAGTCCAGGTTGGAACAAGTGGTGAGTATCCTAATCAAGTTGCGATGCCGGGCCATGCGCAGGGCATGACACTCTGAATCGAAGCTTCTAATAGCTTGTTCCAGCTCCATGTTGAGAACTTTTATTGCCACCATAGTACCGTCGTTCAGTTGGCCCTTGAAAACTTTTCCAAAGCTTCCAGCCCCCAACAATTTAGTCTCACTAAAATTATCCGTGGCTCGGACAATGTCATGGTAAGAGATCAACCTATTGTTGAGCACATCTTCCATATCAGGAGAAATGATTCTATCTTGTTGCTTGGCTTTCTTCCTCATCATCATGTACATGCATGTGGCTATAACTCCGACAACAATAATAACACTGGGGAGCAAGAATTTTAGTATTTGCCTTTTATTACTATTATTGTTGCTCTTACATGGCATAAACCCCAAACGTGGAACACCACCACAAAGGGCGGGGTTGCCCATCAAAGATTGCAGGGTGATGTTTGCAAAGATGCCACCTTCTGGTATTGGACCATGTAGGTTATTGAATGAAAGGTTCAAGCTAGAGAGATCAGTAAAATTTGCTAAATATTGTGGAATTGTCCCCGACAGATCATTGTATGAAACATCCAGTGATTTCAAGTTGATCAACTTGTCAAAAGAGTTTGGAAATGAACCATTTAGTGAGTTGTGTGACAGGTTCAGGTATGTTGTCATTAGAAACTGTCCAAAGGATTCAGGGATCCTACCAAACAACCGGTTGGAAGAGAGATCAATCCTGTCAATATGATTTAGCTGCCCTATATCTACTGGCAATGCACCTTCCAAGGAGTTCTGAGACAGATCAACGGTTATCAAGCTATTCATATGGAATAGGCTTGCTGGTATGGTTGATGACATATGATTTTTAGATAGAACAAGATATTGTAGATTACTGAGGTTTCCAAGATCGTTTGGTAGCACACCTGAGAAGTTGTTGTTATTGAGTATTAGTGTTTGTAGGTTCCTTAGATGACCTATTTGTCTTGGGATTGTGCCAGACATGATATTTCCAGAGAGATTAAGAACTTGGAGCTTGTCCATTAGCATGATTGATTCTGGAATAGTACCAGTCAGTTGGTTGTTTGAAAGGTCCAACCAAACGAGATTGCTTAAATTCAACAGGGTAGAAGGAAGATCACCGGATAACCTGTTTCCTACTGCAAAGAAATTTATTAGAGTACTTGAGAAGTTTCCGACATAGTTAGGGAGCTCCCCTGTGAAATAATTCAAGTCGAAGCCAACTTCCCAGATATTTTGACAGTTTGAAAGTGTAGCCAAGAAGTCGAGGCTCCCTTGTAGGTAGTTGTCTCCAATATTGAACCATTCAACTGATCCTGTGCTACCGATTGCAGTTGGTACTGCTCCGGTAAAACTATTAGCACCAATTAAGAATACAGCTAGTTCCGAAAAGTTGGCAAAAAAGGTAGGGATGGATCCTGTAAAATGATTATGGTCGAGGAATAGCCCTTTGATTTTCCTGAGCTGTGCAAGTTCTTGTGGAATCTGTCCTGTTAAATTGCAGGATTGAAGGCCAAGGGTGTCAAGATTACTAAGATTACCCAATGCAGATGGGATCGGACCAACAAGGTTATTACTCTCTAAATCAAGTAATACGAGGTCTGGCAGTTTTCCCAACCATGCTGGAACTGGGCCCTCGAATAAATTATGTCCAATGAAAATCCATTGGAGGTATTTGCAGTCTGCAAGCCCCAACGGAATCTGTCCCATGAATCTGTTTTCATACAAGCAGATCTTTTGCAGCATGGGGAGGTTGAAGCTCTTGTTACCAGGGATAGATCCATCTAGGTACCCGTTGCCTCCGAGATGCAACATTTCTAGTTTGGACATGTTGAAAATTAACTCAGGTACTGGTCCAGAAAAGTGGTTATATGCTATTTCCAAGTGTTGAAGGATGGGCAAAGTGCCGATACCAACTGGTATTGTCCCTGACAAACTGTTATTCCGGAAGTTTAGATATTTTAGCTTAGGGGTGTTGTTGAACAGATCATTGGGTAGTGGTCCAGTCAAATAATTCACTAGCAAATCTATGTACCTAAGGTTGCGAAGATTCTGCAGCTCACGTGGTATTTGCCCAGAGAGGCTGTTATACCCTACGTTTTGGGAGAGGAGACTACGCCGCCGCAGCGGCGACACAGTCGGGCGCATCCTTTGTGACCATGCTTGCCCTGGCCACCGCCGCCGGCGCGCAGCCTTGGATCGAGAGGGGTGAGACCTCCACGACGCCGCCGCGTAGCTTTGCGACGTCACAGCTGCGCGAGAGGCGGCTGCGGCGGAGGGGATGGAAGGAGAAAAGTTACACCCGCAGGGAAGAGATGGAGGATGTCTGCAGCTGGAGGGGATGGAATGGCCACGACCACGAGGAAGAACTATGTCGACCCCATCGTACCCCCATGTATTGAACGGTCAGATTACAACTGGTATCTACAGGTACTTGTACCGGGCGGTACATTTCGCTGGACCGGAACAAGCCTCCGGGAGGTGTGGATTGTGGTGTTGGGGAGGAGCGGACCATGCGAAAACCCAGCTTTGCCCTTCCACCTGTTCGGCGAAGGGGAGGTACCATTGAGGAGATTTTGGTACCGGACAGTACCGAGGATTCTCATCCGTTAGATCGGACTCAATGGATGGCTCTGATTACAGGTACTGGGAGGTACCACCAGTCATGATGGACTGTAAAAAAACTCTTTTTAGATAGAACAAGATATTGTAGATTACCGAGGTTTCCAAGATCGTTTGGTAGCGTACCAGAGAAGTTGTTGTTATTGAGTATTAGTGTTTGTAGGTTCCAGAGTTGACCTATCTGCCTTGGGATTGAACCAGACAAGCTATTTCCGGAGAGATTAAGAAGTTGGAGCTTGTCCATTAGCTTGATTGATTCTGGAATAGTACCAGTCAGTTGGTTGTTTGAAATGTCCAACCAAACGAGATTGCTTAAATTCGACAGGGTAGAAGGAAGCTCACCGGATAACTTGTTTCCTTCTGCAAAGAAATTTATCAGAGTACTTGAGAAGTTTCCGACATAGTCAGGGAGCTTCCCTGTAAAATCATTCAAGTCGAAGCCAACTTCCCAGATATTTTGACAGTTTGAAAGTGTAGCCAAGAAGTCGAGGCTCCCTTCTTGGTAGTTCCCTCCAATATTAAACCACTCAATTGATCTTGAGCTACCAAGTGCAGTTGGTACTGACCCAGTAAAACTATTAGCACCGATTAGAAAGACTTGTAGTTCAGAAAAGTTAGCAAAAAAGGTAGGGATGGATCCAGTAAAATGATTATGGTCCAGATACAATGCATTGAGTTGCTGAAGCTGTCCAAGTTCTTGTGGAATTAGCCCTGATAAGGTACACGATTGAAGACCAAGGGAGACAAGATTAGTAATATTACCCAGTGCAGATGGGATTTGACCGATAAGATTATTGTAACCTAGATCAAGTAAAAGGAGGTCTGGCAGTTTGCTCAGCCATGTTGGCACAGGGCCCTCGAATGAGTTCTCTCCAATGGAAATTATTTGGATGTATTTGCAGTTTGCAAGCCCTAATGGTATCTGTCCCGTGAATCTATTCGCAAATAGAGAGATCATTTGCAGCATGGGGAGGTTGAAGGTATTATTGTTACCTGGGATAGTTCCAGTTAGGCCCCAGTTGCCTCCAAGAGATAATATTTGCAGCTTGGACATGTTGAGTATAGTTGTTGGAACTGGGCCAGAGAAGTGGTTAGCCTGAAAATCGAGGTGTTGGAGCATGCCTAAGGAACCCACAGAATACGGAAGTGTTCCTGTCAAACTGTTGTTCCCAAAGTCTAGATATTGTAGCTTAGAATTGTTGCTGAAGAGATCATTCGGTAGTGGTCCAGTTAAGTAATTCGTTATGAAATCTATGTGCGTAAGATTGTGCAGTTTTTGCAGCTCAAGTGGAATCTGCCCTGATATGCTGTTGTGCCCCATGTCAACAACCTCAAGCCTTGTGAGGTTTCCTACCACTGGTGGAATGACGCCTGACAAGCTATTCCGGCGGAAAACGAGAACTTCAAGACGATGCAGCTTTCCGAGATCGGCTGGGATGGCGCCGGTGAGTCCCGTGCTAGTGAGGTTGAGGACAGTGAGGAAAGAGAGGTTACCAAGATGAGGCGAGATGCTTCCCTGGAGTGGCACATCGTGCAGCACAAGGGCAACAACCCGTGCCCGGCGGCGACTACATGACACGCCGAACCAATGACAGAAAGATGTGGCAGTAGTCCAGTTGGATAGAACGCCGCGAGGGTCGGCGAGCTGGGCTTTGAAAGCCAGCAGCGCGGTAACGTCTGTGTCACTGCCGTTGCCGGCGGTGACACTGTCTGGGGTCGAAGCAATGGCAATAGAAGCAATGGCAATAGATGCTAAAAACCAGAGGTACAGTAGCAGCGTAATCATGATCGAAGTGGCCAT
More
|
||||||||||
| CDS seq | ATGGCCACTTCGATCATGATTACGCTGCTACTGTACCTCTGGTTTTTAGCATCTATTGCCATTGCTTCTATTGCCATTGCTTCGACCCCAGACAGTGTCACCGCCGGCAACGGCAGTGACACAGACGTTACCGCGCTGCTGGCTTTCAAAGCCCAGCTCGCCGACCCTCGCGGCGTTCTATCCAACTGGACTACTGCCACATCTTTCTGTCATTGGTTCGGCGTGTCATGTAGTCGCCGCCGGGCACGGGTTGTTGCCCTTGTGCTGCACGATGTGCCACTCCAGGGAAGCATCTCGCCTCATCTTGGTAACCTCTCTTTCCTCACTGTCCTCAACCTCACTAGCACGGGACTCACCGGCGCCATCCCAGCCGATCTCGGAAAGCTGCATCGTCTTGAAGTTCTCGTTTTCCGCCGGAATAGCTTGTCAGGCGTCATTCCACCAGTGGTAGGAAACCTCACAAGGCTTGAGGTTGTTGACATGGGGCACAACAGCATATCAGGGCAGATTCCACTTGAGCTGCAAAAACTGCACAATCTTACGCACATAGATTTCATAACGAATTACTTAACTGGACCACTACCGAATGATCTCTTCAGCAACAATTCTAAGCTACAATATCTAGACTTTGGGAACAACAGTTTGACAGGAACACTTCCGTATTCTGTGGGTTCCTTAGGCATGCTCCAACACCTCGATTTTCAGGCTAACCACTTCTCTGGCCCAGTTCCAACAACTATACTCAACATGTCCAAGCTGCAAATATTATCTCTTGGAGGCAACTGGGGCCTAACTGGAACTATCCCAGGTAACAATAATACCTTCAACCTCCCCATGCTGCAAATGATCTCTCTATTTGCGAATAGATTCACGGGACAGATACCATTAGGGCTTGCAAACTGCAAATACATCCAAATAATTTCCATTGGAGAGAACTCATTCGAGGGCCCTGTGCCAACATGGCTGAGCAAACTGCCAGACCTCCTTTTACTTGATCTAGGTTACAATAATCTTATCGGTCAAATCCCATCTGCACTGGGTAATATTACTAATCTTGTCTCCCTTGGTCTTCAATCGTGTACCTTATCAGGGCTAATTCCACAAGAACTTGGACAGCTTCAGCAACTCAATGCATTGTATCTGGACCATAATCATTTTACTGGATCCATCCCTACCTTTTTTGCTAACTTTTCTGAACTACAAGTCTTTCTAATCGGTGCTAATAGTTTTACTGGGTCAGTACCAACTGCACTTGGTAGCTCAAGATCAATTGAGTGGTTTAATATTGGAGGGAACTACCAAGAAGGGAGCCTCGACTTCTTGGCTACACTTTCAAACTGTCAAAATATCTGGGAAGTTGGCTTCGACTTGAATGATTTTACAGGGAAGCTCCCTGACTATGTCGGAAACTTCTCAAGTACTCTGATAAATTTCTTTGCAGAAGGAAACAAGTTATCCGGTGAGCTTCCTTCTACCCTGTCGAATTTAAGCAATCTCGTTTGGTTGGACATTTCAAACAACCAACTGACTGGTACTATTCCAGAATCAATCAAGCTAATGGACAAGCTCCAACTTCTTAATCTCTCCGGAAATAGCTTGTCTGGTTCAATCCCAAGGCAGATAGGTCAACTCTGGAACCTACAAACACTAATACTCAATAACAACAACTTCTCTGCCGCCTCTCGCGCAGCTGTGACGTCGCAAAGCTACGCGGCGGCGTCGTGGAGGTCTCACCCCTCTCGATCCAAGGCTGCGCGCCGGCGGCGGTGGCCAGGGCAAGCATGGTCACAAAGGATGCGCCCGACTGTGTCGCCGCTGCGGCGGCGTAGTCTCCTCTCCCAAAACGTAGGGTATAACAGCCTCTCTGGGCAAATACCACGTGAGCTGCAGAATCTTCGCAACCTTAGGTACATAGATTTGCTAGTGAATTATTTGACTGGACCACTACCCAATGATCTGTTCAACAACACCCCTAAGCTAAAATATCTAAACTTCCGGAATAACAGTTTGTCAGGGACAATACCAGTTGGTATCGGCACTTTGCCCATCCTTCAACACTTGGAAATAGCATATAACCACTTTTCTGGACCAGTACCTGAGTTAATTTTCAACATGTCCAAACTAGAAATGTTGCATCTCGGAGGCAACGGGTACCTAGATGGATCTATCCCTGGTAACAAGAGCTTCAACCTCCCCATGCTGCAAAAGATCTGCTTGTATGAAAACAGATTCATGGGACAGATTCCGTTGGGGCTTGCAGACTGCAAATACCTCCAATGGATTTTCATTGGACATAATTTATTCGAGGGCCCAGTTCCAGCATGGTTGGGAAAACTGCCAGACCTCGTATTACTTGATTTAGAGAGTAATAACCTTGTTGGTCCGATCCCATCTGCATTGGGTAATCTTAGTAATCTTGACACCCTTGGCCTTCAATCCTGCAATTTAACAGGACAGATTCCACAAGAACTTGCACAGCTCAGGAAAATCAAAGGGCTATTCCTCGACCATAATCATTTTACAGGATCCATCCCTACCTTTTTTGCCAACTTTTCGGAACTAGCTGTATTCTTAATTGGTGCTAATAGTTTTACCGGAGCAGTACCAACTGCAATCGGTAGCACAGGATCAGTTGAATGGTTCAATATTGGAGACAACTACCTACAAGGGAGCCTCGACTTCTTGGCTACACTTTCAAACTGTCAAAATATCTGGGAAGTTGGCTTCGACTTGAATTATTTCACAGGGGAGCTCCCTAACTATGTCGGAAACTTCTCAAGTACTCTAATAAATTTCTTTGCAGTAGGAAACAGGTTATCCGGTGATCTTCCTTCTACCCTGTTGAATTTAAGCAATCTCGTTTGGTTGGACCTTTCAAACAACCAACTGACTGGTACTATTCCAGAATCAATCATGCTAATGGACAAGCTCCAAGTTCTTAATCTCTCTGGAAATATCATGTCTGGCACAATCCCAAGACAAATAGGTCATCTAAGGAACCTACAAACACTAATACTCAATAACAACAACTTCTCAGGTGTGCTACCAAACGATCTTGGAAACCTCAGTAATCTACAATATCTTGTTCTATCTAAAAATCATATGTCATCAACCATACCAGCAAGCCTATTCCATATGAATAGCTTGATAACCGTTGATCTGTCTCAGAACTCCTTGGAAGGTGCATTGCCAGTAGATATAGGGCAGCTAAATCATATTGACAGGATTGATCTCTCTTCCAACCGGTTGTTTGGTAGGATCCCTGAATCCTTTGGACAGTTTCTAATGACAACATACCTGAACCTGTCACACAACTCACTAAATGGTTCATTTCCAAACTCTTTTGACAAGTTGATCAACTTGAAATCACTGGATGTTTCATACAATGATCTGTCGGGGACAATTCCACAATATTTAGCAAATTTTACTGATCTCTCTAGCTTGAACCTTTCATTCAATAACCTACATGGTCCAATACCAGAAGGTGGCATCTTTGCAAACATCACCCTGCAATCTTTGATGGGCAACCCCGCCCTTTGTGGTGGTGTTCCACGTTTGGGGTTTATGCCATGTAAGAGCAACAATAATAGTAATAAAAGGCAAATACTAAAATTCTTGCTCCCCAGTGTTATTATTGTTGTCGGAGTTATAGCCACATGCATGTACATGATGATGAGGAAGAAAGCCAAGCAACAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAATAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAAATTGTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTATTAGAAGCTTCGATTCAGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACTTGTTCCAACCTGGACTTCTTTTTTTCGCCGGGAAGGCCGAAGGAGGCCAACCGAGTATATTAA
More
|
||||||||||
| Protein seq | MATSIMITLLLYLWFLASIAIASIAIASTPDSVTAGNGSDTDVTALLAFKAQLADPRGVLSNWTTATSFCHWFGVSCSRRRARVVALVLHDVPLQGSISPHLGNLSFLTVLNLTSTGLTGAIPADLGKLHRLEVLVFRRNSLSGVIPPVVGNLTRLEVVDMGHNSISGQIPLELQKLHNLTHIDFITNYLTGPLPNDLFSNNSKLQYLDFGNNSLTGTLPYSVGSLGMLQHLDFQANHFSGPVPTTILNMSKLQILSLGGNWGLTGTIPGNNNTFNLPMLQMISLFANRFTGQIPLGLANCKYIQIISIGENSFEGPVPTWLSKLPDLLLLDLGYNNLIGQIPSALGNITNLVSLGLQSCTLSGLIPQELGQLQQLNALYLDHNHFTGSIPTFFANFSELQVFLIGANSFTGSVPTALGSSRSIEWFNIGGNYQEGSLDFLATLSNCQNIWEVGFDLNDFTGKLPDYVGNFSSTLINFFAEGNKLSGELPSTLSNLSNLVWLDISNNQLTGTIPESIKLMDKLQLLNLSGNSLSGSIPRQIGQLWNLQTLILNNNNFSAASRAAVTSQSYAAASWRSHPSRSKAARRRRWPGQAWSQRMRPTVSPLRRRSLLSQNVGYNSLSGQIPRELQNLRNLRYIDLLVNYLTGPLPNDLFNNTPKLKYLNFRNNSLSGTIPVGIGTLPILQHLEIAYNHFSGPVPELIFNMSKLEMLHLGGNGYLDGSIPGNKSFNLPMLQKICLYENRFMGQIPLGLADCKYLQWIFIGHNLFEGPVPAWLGKLPDLVLLDLESNNLVGPIPSALGNLSNLDTLGLQSCNLTGQIPQELAQLRKIKGLFLDHNHFTGSIPTFFANFSELAVFLIGANSFTGAVPTAIGSTGSVEWFNIGDNYLQGSLDFLATLSNCQNIWEVGFDLNYFTGELPNYVGNFSSTLINFFAVGNRLSGDLPSTLLNLSNLVWLDLSNNQLTGTIPESIMLMDKLQVLNLSGNIMSGTIPRQIGHLRNLQTLILNNNNFSGVLPNDLGNLSNLQYLVLSKNHMSSTIPASLFHMNSLITVDLSQNSLEGALPVDIGQLNHIDRIDLSSNRLFGRIPESFGQFLMTTYLNLSHNSLNGSFPNSFDKLINLKSLDVSYNDLSGTIPQYLANFTDLSSLNLSFNNLHGPIPEGGIFANITLQSLMGNPALCGGVPRLGFMPCKSNNNSNKRQILKFLLPSVIIVVGVIATCMYMMMRKKAKQQDRIISPDMEDVLNNRLISYHDIVRATDNFSETKLLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAIRSFDSECHALRMARHRNLIRILTTCSNLDFFFSPGRPKEANRVY |
||||||||||
| Function | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os04g14570 | LOC_Os04g14570.1 | Chr04 | 8166743 | 8171255 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCCACTTCGATCATGATTACGCTGCTACTGTACCTCTGGTTTTTAGCATCTATTGCCATTGCTTCTATTGCCATTGCTTCGACCCCAGACAGTGTCACCGCCGGCAACGGCAGTGACACAGACGTTACCGCGCTGCTGGCTTTCAAAGCCCAGCTCGCCGACCCTCGCGGCGTTCTATCCAACTGGACTACTGCCACATCTTTCTGTCATTGGTTCGGCGTGTCATGTAGTCGCCGCCGGGCACGGGTTGTTGCCCTTGTGCTGCACGATGTGCCACTCCAGGGAAGCATCTCGCCTCATCTTGGTAACCTCTCTTTCCTCACTGTCCTCAACCTCACTAGCACGGGACTCACCGGCGCCATCCCAGCCGATCTCGGAAAGCTGCATCGTCTTGAAGTTCTCGTTTTCCGCCGGAATAGCTTGTCAGGCGTCATTCCACCAGTGGTAGGAAACCTCACAAGGCTTGAGGTTGTTGACATGGGGCACAACAGCATATCAGGGCAGATTCCACTTGAGCTGCAAAAACTGCACAATCTTACGCACATAGATTTCATAACGAATTACTTAACTGGACCACTACCGAATGATCTCTTCAGCAACAATTCTAAGCTACAATATCTAGACTTTGGGAACAACAGTTTGACAGGAACACTTCCGTATTCTGTGGGTTCCTTAGGCATGCTCCAACACCTCGATTTTCAGGCTAACCACTTCTCTGGCCCAGTTCCAACAACTATACTCAACATGTCCAAGCTGCAAATATTATCTCTTGGAGGCAACTGGGGCCTAACTGGAACTATCCCAGGTAACAATAATACCTTCAACCTCCCCATGCTGCAAATGATCTCTCTATTTGCGAATAGATTCACGGGACAGATACCATTAGGGCTTGCAAACTGCAAATACATCCAAATAATTTCCATTGGAGAGAACTCATTCGAGGGCCCTGTGCCAACATGGCTGAGCAAACTGCCAGACCTCCTTTTACTTGATCTAGGTTACAATAATCTTATCGGTCAAATCCCATCTGCACTGGGTAATATTACTAATCTTGTCTCCCTTGGTCTTCAATCGTGTACCTTATCAGGGCTAATTCCACAAGAACTTGGACAGCTTCAGCAACTCAATGCATTGTATCTGGACCATAATCATTTTACTGGATCCATCCCTACCTTTTTTGCTAACTTTTCTGAACTACAAGTCTTTCTAATCGGTGCTAATAGTTTTACTGGGTCAGTACCAACTGCACTTGGTAGCTCAAGATCAATTGAGTGGTTTAATATTGGAGGGAACTACCAAGAAGGGAGCCTCGACTTCTTGGCTACACTTTCAAACTGTCAAAATATCTGGGAAGTTGGCTTCGACTTGAATGATTTTACAGGGAAGCTCCCTGACTATGTCGGAAACTTCTCAAGTACTCTGATAAATTTCTTTGCAGAAGGAAACAAGTTATCCGGTGAGCTTCCTTCTACCCTGTCGAATTTAAGCAATCTCGTTTGGTTGGACATTTCAAACAACCAACTGACTGGTACTATTCCAGAATCAATCAAGCTAATGGACAAGCTCCAACTTCTTAATCTCTCCGGAAATAGCTTGTCTGGTTCAATCCCAAGGCAGATAGGTCAACTCTGGAACCTACAAACACTAATACTCAATAACAACAACTTCTCTGCCGCCTCTCGCGCAGCTGTGACGTCGCAAAGCTACGCGGCGGCGTCGTGGAGGTCTCACCCCTCTCGATCCAAGGCTGCGCGCCGGCGGCGGTGGCCAGGGCAAGCATGGTCACAAAGGATGCGCCCGACTGTGTCGCCGCTGCGGCGGCGTAGTCTCCTCTCCCAAAACGTAGGGTATAACAGCCTCTCTGGGCAAATACCACGTGAGCTGCAGAATCTTCGCAACCTTAGGTACATAGATTTGCTAGTGAATTATTTGACTGGACCACTACCCAATGATCTGTTCAACAACACCCCTAAGCTAAAATATCTAAACTTCCGGAATAACAGTTTGTCAGGGACAATACCAGTTGGTATCGGCACTTTGCCCATCCTTCAACACTTGGAAATAGCATATAACCACTTTTCTGGACCAGTACCTGAGTTAATTTTCAACATGTCCAAACTAGAAATGTTGCATCTCGGAGGCAACGGGTACCTAGATGGATCTATCCCTGGTAACAAGAGCTTCAACCTCCCCATGCTGCAAAAGATCTGCTTGTATGAAAACAGATTCATGGGACAGATTCCGTTGGGGCTTGCAGACTGCAAATACCTCCAATGGATTTTCATTGGACATAATTTATTCGAGGGCCCAGTTCCAGCATGGTTGGGAAAACTGCCAGACCTCGTATTACTTGATTTAGAGAGTAATAACCTTGTTGGTCCGATCCCATCTGCATTGGGTAATCTTAGTAATCTTGACACCCTTGGCCTTCAATCCTGCAATTTAACAGGACAGATTCCACAAGAACTTGCACAGCTCAGGAAAATCAAAGGGCTATTCCTCGACCATAATCATTTTACAGGATCCATCCCTACCTTTTTTGCCAACTTTTCGGAACTAGCTGTATTCTTAATTGGTGCTAATAGTTTTACCGGAGCAGTACCAACTGCAATCGGTAGCACAGGATCAGTTGAATGGTTCAATATTGGAGACAACTACCTACAAGGGAGCCTCGACTTCTTGGCTACACTTTCAAACTGTCAAAATATCTGGGAAGTTGGCTTCGACTTGAATTATTTCACAGGGGAGCTCCCTAACTATGTCGGAAACTTCTCAAGTACTCTAATAAATTTCTTTGCAGTAGGAAACAGGTTATCCGGTGATCTTCCTTCTACCCTGTTGAATTTAAGCAATCTCGTTTGGTTGGACCTTTCAAACAACCAACTGACTGGTACTATTCCAGAATCAATCATGCTAATGGACAAGCTCCAAGTTCTTAATCTCTCTGGAAATATCATGTCTGGCACAATCCCAAGACAAATAGGTCATCTAAGGAACCTACAAACACTAATACTCAATAACAACAACTTCTCAGGTGTGCTACCAAACGATCTTGGAAACCTCAGTAATCTACAATATCTTGTTCTATCTAAAAATCATATGTCATCAACCATACCAGCAAGCCTATTCCATATGAATAGCTTGATAACCGTTGATCTGTCTCAGAACTCCTTGGAAGGTGCATTGCCAGTAGATATAGGGCAGCTAAATCATATTGACAGGATTGATCTCTCTTCCAACCGGTTGTTTGGTAGGATCCCTGAATCCTTTGGACAGTTTCTAATGACAACATACCTGAACCTGTCACACAACTCACTAAATGGTTCATTTCCAAACTCTTTTGACAAGTTGATCAACTTGAAATCACTGGATGTTTCATACAATGATCTGTCGGGGACAATTCCACAATATTTAGCAAATTTTACTGATCTCTCTAGCTTGAACCTTTCATTCAATAACCTACATGGTCCAATACCAGAAGGTGGCATCTTTGCAAACATCACCCTGCAATCTTTGATGGGCAACCCCGCCCTTTGTGGTGGTGTTCCACGTTTGGGGTTTATGCCATGTAAGAGCAACAATAATAGTAATAAAAGGCAAATACTAAAATTCTTGCTCCCCAGTGTTATTATTGTTGTCGGAGTTATAGCCACATGCATGTACATGATGATGAGGAAGAAAGCCAAGCAACAAGATAGAATCATTTCTCCTGATATGGAAGATGTGCTCAACAATAGGTTGATCTCTTACCATGACATTGTCCGAGCCACGGATAATTTTAGTGAGACTAAATTGTTGGGGGCTGGAAGCTTTGGAAAAGTTTTCAAGGGCCAACTGAACGACGGTACTATGGTGGCAATAAAAGTTCTCAACATGGAGCTGGAACAAGCTATTAGAAGCTTCGATTCAGAGTGTCATGCCCTGCGCATGGCCCGGCATCGCAACTTGATTAGGATACTCACCACTTGTTCCAACCTGGACTTCTTTTTTTCGCCGGGAAGGCCGAAGGAGGCCAACCGAGTATATTAA
More
|
|||||||
| Protein seq | MATSIMITLLLYLWFLASIAIASIAIASTPDSVTAGNGSDTDVTALLAFKAQLADPRGVLSNWTTATSFCHWFGVSCSRRRARVVALVLHDVPLQGSISPHLGNLSFLTVLNLTSTGLTGAIPADLGKLHRLEVLVFRRNSLSGVIPPVVGNLTRLEVVDMGHNSISGQIPLELQKLHNLTHIDFITNYLTGPLPNDLFSNNSKLQYLDFGNNSLTGTLPYSVGSLGMLQHLDFQANHFSGPVPTTILNMSKLQILSLGGNWGLTGTIPGNNNTFNLPMLQMISLFANRFTGQIPLGLANCKYIQIISIGENSFEGPVPTWLSKLPDLLLLDLGYNNLIGQIPSALGNITNLVSLGLQSCTLSGLIPQELGQLQQLNALYLDHNHFTGSIPTFFANFSELQVFLIGANSFTGSVPTALGSSRSIEWFNIGGNYQEGSLDFLATLSNCQNIWEVGFDLNDFTGKLPDYVGNFSSTLINFFAEGNKLSGELPSTLSNLSNLVWLDISNNQLTGTIPESIKLMDKLQLLNLSGNSLSGSIPRQIGQLWNLQTLILNNNNFSAASRAAVTSQSYAAASWRSHPSRSKAARRRRWPGQAWSQRMRPTVSPLRRRSLLSQNVGYNSLSGQIPRELQNLRNLRYIDLLVNYLTGPLPNDLFNNTPKLKYLNFRNNSLSGTIPVGIGTLPILQHLEIAYNHFSGPVPELIFNMSKLEMLHLGGNGYLDGSIPGNKSFNLPMLQKICLYENRFMGQIPLGLADCKYLQWIFIGHNLFEGPVPAWLGKLPDLVLLDLESNNLVGPIPSALGNLSNLDTLGLQSCNLTGQIPQELAQLRKIKGLFLDHNHFTGSIPTFFANFSELAVFLIGANSFTGAVPTAIGSTGSVEWFNIGDNYLQGSLDFLATLSNCQNIWEVGFDLNYFTGELPNYVGNFSSTLINFFAVGNRLSGDLPSTLLNLSNLVWLDLSNNQLTGTIPESIMLMDKLQVLNLSGNIMSGTIPRQIGHLRNLQTLILNNNNFSGVLPNDLGNLSNLQYLVLSKNHMSSTIPASLFHMNSLITVDLSQNSLEGALPVDIGQLNHIDRIDLSSNRLFGRIPESFGQFLMTTYLNLSHNSLNGSFPNSFDKLINLKSLDVSYNDLSGTIPQYLANFTDLSSLNLSFNNLHGPIPEGGIFANITLQSLMGNPALCGGVPRLGFMPCKSNNNSNKRQILKFLLPSVIIVVGVIATCMYMMMRKKAKQQDRIISPDMEDVLNNRLISYHDIVRATDNFSETKLLGAGSFGKVFKGQLNDGTMVAIKVLNMELEQAIRSFDSECHALRMARHRNLIRILTTCSNLDFFFSPGRPKEANRVY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0227000 | RBH | 0.722917 | 0.598978 | 0.390265 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g32580 | RBH | 8.105267 | 6.763444 | 5.492181 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0227000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0004780 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0005420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0005050 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0004870 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0004760 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0166300 | SBH | 20.6313675 | 40.129381 | 59.6050625 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0004990 | SBH | 0.0 | 0.0 | 0.769097 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0564700 | SBH | 37.283126 | 156.0121385 | 68.0994685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0004790 | SBH | 0.225055 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0004930 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0004910 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0004570 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0004840 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G012280 | SBH | 2.352120 | 10.527529 | 8.430974 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0022440 | SBH | 6.611960 | 119.099159 | 29.836306 |
