Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os02g39920 | OGI:02068690 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr02:24139753-24146705 | ||||||||
| Gene Symbol | BIP135 | ||||||||||
| DNA seq | AAAAAGAGAAGATAATGTATACTCTACTCGCAGAGGAATATGAGCTCTGAAAAACAGGATTTCTTAATGGTGCCAGGCAGGGCTGACAGACCGGCACATTAGCTACAAAACTCATTTGCTCATATGGCCTAAATAAATAAGACATCAACAGGCTAGCTACAACATCATCCGACACAACTATGATGTCATTGGCCTCTTGGCAAGCATGGGGTTCAACCAACCATTAAAAGTTGCGCACTTGCGCCTAACATCACAACTACAGCATTTTTATCTTGTCTACAACCCCTAGTTAAAACCGCTACATGCCCAATCAGTTGGCATTCCAATAGGTCACCCGACCGAAGAGTTACAACCACACAGGGTGCAATGTTTTAACACCTTTTGAGACTAAGCGAACCTTTTGAGTCTAGAGAGCGAATCCATGTACAAGAGAAATTAGCGGGTAACTTCAAGCCTTCCTTCTGCGCTTCTTTTCTCCAGTAGAAGCGCCACCAGCGGATCCCTAACTTCAAGCCTTCCTTCTGCGCTTCTTTCCTCCAGTAGAAGCGCCACCAGCAGATCCCCCCTGCTCCACTTCAGCTGCTGCCTCGCCTTCTGCTTCCTTCTGCTTCTCTTTCTCAGCTGAGACATTGGCCTTAGATTCCTCACCAGCCACCGCAGCACCGGCAACCTTTGGCTTTCGACCTGGCTTGGCTCTTCCTTCACTTGGTTTGCTCTCACCCTTCAAATCCTTGCCTCCGCTGCTAGCCTCCTTTGGTTTACTGGCACTCTTGTTGCTACCATCCTCAGGCAAATCATCCTTTGTCTTCTCAGTTGACTTAGTGGCTTTGTCTTCGGATCCTTCTTCAGCTTCCTTCTTAAGGTCACTGCCAACCTTAGGTGTCTCATTTTCATCCTTCCTTGCAGCTTTCCCCTTTGATTTGCTTGAAGTTGCCGAGATGTTACTTTTGGGTGTACCATTGCTGGAACCTTTCGGACGACCCCTTTTTTTGGGAAGATCGCCTCCACCACTGCCATTAAACAGAAACATAAGTCTCAGAAAATATGTAGTCAATTGTCTACACTGCTTCTTTGATTACCAAATTACCTTTTAGGTGTTTCTGCATTTCCTTCCTTCAATTGCACTGAGCTCCCTCTTCCTTTTCTGCCCCTACCCCGTGGCTTCGGGGAACTTGAAACAACCAGTAACACAAATTTATCAAACAAAATACCACTTGATGCAAATAAGTATGACAAATTAGTCACAGGTTTCACAATTGGAATAACTAGGGATGTTTGTGGGAATCCCATTTACTTCACACCTGGACCAAACGGTGTTCAATTTAGTAATTTTTGAGTTAATTTGCATGGAAACGAATTAGGATGGACCCATGGGCTGGCACAACCCGACCCAGTCATCCCTAGAGAAAACTAGGAATTATTGGGTGTTTGTAAGGAATTTGCTGAATTCCCAACACAGTCAGGACAGCAGACATTTCTCTACAGTTCTTTTTACCATGGCCAAATTATGACAAAAAAAAACTTAGCCTATTCAGCAAGCCAACATAGCTTATAACAATAGGAGGTGCCAAGCATAATAGAACTCAAGAAACTGGAGAGAAATAAATCATTAAAAAATGCACTGGATGCTACGATTGAAAACCAGTGATTGAATCAATAAAAAACTTGAACTGTATAGCTACCATAAATGCAAAGTAAAAATGTGATTTTGAAGTTGCAGGTATGGAAGTGGTGTCAAGATAATTCACTTACATCTCGGAAGCCACATCAGGGGTTTTGTCTTGTTCCTGATATAACAACTGCTAATTAGTTTAAAAAAAAGGAAGAGGAGAAAGCAGAATCACAACATTAAATGCAATCTAAGCAGAATCACAACATTATGTGCATACCTCACTGACGAATTCCCACTTTTCATCCCTAAGGAGAAGCACCTCTACATCTCCATCATCATATGCAATCTAAGCTCCAAAAGTACAAAAAATCAACCATACAAGAAAAACAGAATAAAACCTTTTTTTACCAAGAGAATAAAACAATATTTTAATTGGCATAAGCTCTTCATGTAGGTCATATATCCCATGAAAGCAGATGATACAATGTACAGGGCTCATACCTTGTGCCTTTTTGAAGCTGTATCAAATGAGTCAACAATGCCCTTGTAAAACCTGCAAATATTTAAAACAAAGGACCTCAAAATTTTGAAACAGGATACAAAATAACCCAATAAATTGTACCAAAGCAAAGGACATGCCTCATCAATAATGAGCAAATATATTATTATTTGATTAAAACATCAAACAGGACTAACCTAAATACTAAGTCAATGTTAATATATATACACCATTTAGAAAAAGCTACACAGCAGATTTGGAATTAGAACAGCGGAAGAATAGAAAGGCATAAAGAAGTAAAAAAGATGAGCTAGCAAATATGCCGTGTGATGATAATGTCTATATATCTGGTTAGTTTATATACTCCAGTGTCAACATGAAACATGGCAACAATTGTAAAAGATTTAGCATAGAGACTAATGATCATATCACTTACTTCTTGTCGTCAGGCCACCATACTTGGATCCTTGCACCAACAAGGCTAGCATCAAGGCCTTTATTCTTCCTAGAACGAGGAGTCTGCAGAGGGCATATAAACTTAAGAATAAGACCAAAACATAGGAGATGTTAACAGGTGTCTTGAGAACCAAACATCTTCAAGCTCAACTATAATTACGCTTCTAAAACATTGTTATGCATTAAGTGATTTTATCCTAAATCACCTGAATAAACTGGGATCCCTATTGAAGCGTATTTTTTTATCCTAAATCAGCTATTGAAGGTTGTTACCTAGGGTGTGCCCAGAAAATATAATCAAATATTTTTTAACACAGATTTTTCTAACACAGAATTACCAGTTTTGAAGTTGAAGTTGTTGCAACAAACAAATATTATATTTGAGCTATTGCAACATCATTCTCTACAAGTCAGATTATTAAACAGAAATTTAGTAAGCACATTATCTTTTGGCACAAAAAGAAAGCAACATGCTAACTTAAATTACACCTTTATGAGTAAGCGATCAAATGAAATATGAGCAGAGAAAAGCACAGCAGACAGGCAACAGAACACAGAGAATCAACTAATCAAGAATGCATGCATAATCAAGTGCATACCTCTTGTTCATCCTCTTGTGACCTTTTCCTCTTGGAGCCATTATTGTCCTGGCCTTGGCTGCCCTTGGTCTTAGCTGACCCCTTGGACACGGACTTTGGAGAGACCATTTCCTTTATTGAGATAGAACAAACAGTACAACAACCAGTGTGCTAAAAAGCAACTGAATAGATGCTATTAAATTCTATCTGTTTTGAATTAACATCAAAGATAGGATCAAATCACAATTGAACCACACTAAATAACTCCTATATACTCAGTGTTATAGCAAAGTTTACAAGACAATAACAGGATTTGAATCACAAGCAACTGTATCAGTAAACAAAAGCTCGTAATACCTTGAAACAGTAAACACACTCAAAACATGTTTCAGATACACAAACATAGCATGCCAGAGAGAAATAGTATTAACAAAGACTGAATAATGCAGCAAATCAATGCTAAAGACAGGCAGCTTTACTAATTATACAAAAAAATTACTACTGACAAGAAAATTACCTTTAGGCTCAGATCCTTAGCAGTATCTTCCTTGGAGTCAGTTTCATCCTTCTGTTTCAAACTGATCTTTTGTTGCTTTTTTGATGACCCTGCTCCACTTGCCTTTCTTGTAGATGACTTGGAATCATCCTTAGATGACTGCTTCGATAACTTCCCTGTTGAATCAGTAGTCTCCTCAACCTTTTTCAGACCTAGAACTTTCTTTCCAGCAGCCTTCTTCTCCAATGACTTTAGTCCAGGAGGTCGACCTCTTTTTGATTTGACCATAGCTGGTGAGCCATCAACACGTTCTGATGTTTCAGCAGAAGCTCCATTGGCAACCTTTGCTGACTGCTTAACACCATCCTTTTTCTCTGAATCGGGATTGGATAATTCCTTGGGATTAGCAGCTGCAGATTCTGTGCCTTCAGTAACAAGATTCAACATATCAGCATCTTTTGTATTTACAGAACAGTAAGGTTGTTCAAGGCTTCAAGCTTATCCTTTGGAGGTGTCCTTACCATTATCAACTGGAGTTGCACCACTGCCAATAGCAGTAGTCTGAGTAACATCTTGCTCCAACTTTGCAGGTTCCTGAAAATAGAGATGGCACGGTGTATTATCAAAAGTTCATTTGTTTAGTTGATAAAAACAGAAATGCAGAGCAGCATACCTGAGGTAGCTCATCAGAAATAGTCCTTTCAGAAAGTTTGCCATCATCCACCTGAACATTATTAACTCAATAGTAAGAATAGATGAATCCACATCAAGAGCCCATGTGGCCAATTTGTTTTCCAGTTTCAACGATAAGGTGTTGAAATGAGCTGTATATTAAGTTCTGAGACTAATATTCACACCATCACAAAGTACACCCGTACACTCTATAGACTAAAGCCAATCACAATTTCATCTTCCAAGTGATCCATTCCAATATAATGCAGAGAGCATTAATGAATTCAAGGCGTATTTCAAACATACTAAAAAAATTATACACATAATGACCTATTCTAACACCTATGATTATCACATAGAAGTCTAAGGTAAAAAAGAAACATCTCTGAATATTAGTTGCTGCATGTTAGTAATTCAACTGACCACATCTTTTCCAGAAGGATCAGCATCCATGTCTTCCTTGACATCTGAACTGTCTTCACAAATTGTTGCGATAATATTGTCATATTCATTCAAGGAAGTGCCTTTAAGTAACTGCAGAAAGACCGGTTTCAGTTTTTCAGAGCATGCACCTATCACCTTCTCTGCAAGTTCAAAAGATGCAGCAGAAGTTTCCTGGAAATAAAAACCAAATCAATTAGATGGTATCTTTTTGTCTGGGTAGGAATGTAGATTCATATTGTTGATGTCAAGAAAGTTAAAAACATATATATGTACCTTCAGTTCGGACTTAGCATGCTTGAGCAGACATTCTGCAATGGGTATCTCAACTTCATCATCCTCTTCAATTACCAAAATCATTATTGTAGTCATACAGTTTGTAACATTTTCTGGGTGATTTGGTCTGAAATATGAGACAAGGGATTTCAAATTATGAGTGTACATACAAAGCATACAATGCAGACATTAAAGTATAATATCTAACAAAAATGTGTTAATTATCAACTGGCCAAAGTAGTAACACAAGCAAGTTATTTAGGTAAAAACAATGTAATCATGAAAGATCTTAATATTGGCGATTTAGCTCAGACTGATGACTTTAAATACAGAGTATATAAGAAGCCTATAAGAAAAACATTGAATAAGATCTGTGCAGAACAGAACAGCCAATTGTATAAAAAACTATCTGATATTCTTGTTCTTGAAGAACCGTTACAGGTAAGAACTATGTTAAGGAAATAAAATTGACTCATTTAGCATTCTTGGAGAACATAATTTAGCAAAACTTACTTCAAACTTATCATGAGAACTAGCAAATATAGATGAAATTAAGAACAAACGAAGAGGTACTTACTTCACAGTTGTGAAGAAGTTGTGAAACATTTGCAGTATCAGATCTTCACACTCAAGATCCAACATCACCACGCATAGCCGGACCTTTGCCACAGTTTCAAGGATTGCAACTATCCTTCGAAACAAGGGGTTCTCCATATCATCCAATTTCTCAAAAGACCCCACCATTATGGAAAACACGTCCTGAACCGAAAGTAGATAGCACAGGTCAGATGTCAGGATATAGGATATCAAAACAAGATCATCTTCATCCGATAAGAAAAAGGTATACCTTCATGACATCATCGTCATATGGAGTGTCAGGTGCAGTGATCCTAGTTATCTCAGAAATACAGGACACCACAGAAAGTTTCACCTCATAGCTAGAATTATCCAACAGCTCTTTCTTGATCAAAGCTTTCATTGCTGGAGTTATAGCACTAATCATGCTTTCAGAAGGTGCTTGTTCCACTTTCAATATATATATTTCGGCCTCCTGCATGAACAAACAATCATGCCAATCAAAGATCAGTTTTCTAGGGAACCAAGAAGATCATATATGCTCTTAATAAAACTGTAATGTTAAAGGAGTATGGTGCATTTACAGGAATCAACACCACGGCAAACTCCGTATATCAACAATCCAACTCCATATGTCAACAAACACGACGGAAAATACTCTAGAAAAACAAATGCTTGCTCTTTGTGCCATAACGGAAAATCAAACGGATTGCAGAGCAGCAGAAACCAAAATGAATCTAAAGCGGAATTCCAGTCCAGTAAAAATCACGACTCCCAACCGAATCAATCCTCGCGGAATGGTATCAAGCCAAAGCTTCCGAACCATCCCGAAATCAAACCAACCATCCCGAAACCACGCAATCAACAGGATTAATAAAAATAAATAAATCCAACAAACAGCAGAACCCTGACAGGAGAGGCAAAAAAAAAACGTTTCAAAGCGAACACAAACGAATTCCAGCACAGAGAGGGTTAGAGAGACTCACGTGGATGAGCTTGAGCAAGGCATCGACGTCGTCGGGGGGAGACTGGAGCTTCTCCCCGACGTCCCTCAGCTTCCCCTCGAGCTCCCCGAGCTCCGCCATTCCCGCGCGCGCGGCACCCCCCGCGCGTCCCCCCCCTGCCACCCCCTGGATCCGGCCGCCCCCGCCCCGCCCCGCCCCGCCGCGCGAGATCTACGGCTTGCTTGCTAGGGTTTCAGCGGGGAGGGAGGAGCAACGCCGCGCACCACCCCCTGCCCACGCGCGCGCGAGGCAGCGGCCGACGCCGACGACGGCAAACCAAGGTGACGGGAAGAGAGGAGAGGAGATGGATTTCTCTATAGCTATCTCTGCCTCTCTCTCTCTC
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| CDS seq | ATGGCGGAGCTCGGGGAGCTCGAGGGGAAGCTGAGGGACGTCGGGGAGAAGCTCCAGTCTCCCCCCGACGACGTCGATGCCTTGCTCAAGCTCATCCACGAGGCCGAAATATATATATTGAAAGTGGAACAAGCACCTTCTGAAAGCATGATTAGTGCTATAACTCCAGCAATGAAAGCTTTGATCAAGAAAGAGCTGTTGGATAATTCTAGCTATGAGGTGAAACTTTCTGTGGTGTCCTGTATTTCTGAGATAACTAGGATCACTGCACCTGACACTCCATATGACGATGATGTCATGAAGGACGTGTTTTCCATAATGGTGGGGTCTTTTGAGAAATTGGATGATATGGAGAACCCCTTGTTTCGAAGGATAGTTGCAATCCTTGAAACTGTGGCAAAGGTCCGGCTATGCGTGGTGATGTTGGATCTTGAGTGTGAAGATCTGATACTGCAAATGTTTCACAACTTCTTCACAACTGTGAAACCAAATCACCCAGAAAATGTTACAAACTGTATGACTACAATAATGATTTTGGTAATTGAAGAGGATGATGAAGTTGAGATACCCATTGCAGAATGTCTGCTCAAGCATGCTAAGTCCGAACTGAAGGAAACTTCTGCTGCATCTTTTGAACTTGCAGAGAAGGTGATAGGTGCATGCTCTGAAAAACTGAAACCGGTCTTTCTGCAGTTACTTAAAGGCACTTCCTTGAATGAATATGACAATATTATCGCAACAATTTGTGAAGACAGTTCAGATGTCAAGGAAGACATGGATGCTGATCCTTCTGGAAAAGATGTGGTGGATGATGGCAAACTTTCTGAAAGGACTATTTCTGATGAGCTACCTCAGGAACCTGCAAAGTTGGAGCAAGATGTTACTCAGACTACTGCTATTGGCAGTGGTGCAACTCCAGTTGATAATGGCACAGAATCTGCAGCTGCTAATCCCAAGGAATTATCCAATCCCGATTCAGAGAAAAAGGATGGTGTTAAGCAGTCAGCAAAGGTTGCCAATGGAGCTTCTGCTGAAACATCAGAACGTGTTGATGGCTCACCAGCTATGGTCAAATCAAAAAGAGGTCGACCTCCTGGACTAAAGTCATTGGAGAAGAAGGCTGCTGGAAAGAAAGTTCTAGGTCTGAAAAAGGTTGAGGAGACTACTGATTCAACAGGGAAGTTATCGAAGCAGTCATCTAAGGATGATTCCAAGTCATCTACAAGAAAGGCAAGTGGAGCAGGGTCATCAAAAAAGCAACAAAAGATCAGTTTGAAACAGAAGGATGAAACTGACTCCAAGGAAGATACTGCTAAGGATCTGAGCCTAAAGGAAATGGTCTCTCCAAAGTCCGTGTCCAAGGGGTCAGCTAAGACCAAGGGCAGCCAAGGCCAGGACAATAATGGCTCCAAGAGGAAAAGGTCACAAGAGGATGAACAAGAGACTCCTCGTTCTAGGAAGAATAAAGGCCTTGATGCTAGCCTTGTTGGTGCAAGGATCCAAGTATGGTGGCCTGACGACAAGAAGTTTTACAAGGGCATTGTTGACTCATTTGATACAGCTTCAAAAAGGCACAAGATTGCATATGATGATGGAGATGTAGAGGTGCTTCTCCTTAGGGATGAAAAGTGGGAATTCGTCAGTGAGGAACAAGACAAAACCCCTGATGTGGCTTCCGAGATTTCCCCGAAGCCACGGGGTAGGGGCAGAAAAGGAAGAGGGAGCTCAGTGCAATTGAAGGAAGGAAATGCAGAAACACCTAAAAGTGGTGGAGGCGATCTTCCCAAAAAAAGGGGTCGTCCGAAAGGTTCCAGCAATGGTACACCCAAAAGTAACATCTCGGCAACTTCAAGCAAATCAAAGGGGAAAGCTGCAAGGAAGGATGAAAATGAGACACCTAAGGTTGGCAGTGACCTTAAGAAGGAAGCTGAAGAAGGATCCGAAGACAAAGCCACTAAGTCAACTGAGAAGACAAAGGATGATTTGCCTGAGGATGGTAGCAACAAGAGTGCCAGTAAACCAAAGGAGGCTAGCAGCGGAGGCAAGGATTTGAAGGGTGAGAGCAAACCAAGTGAAGGAAGAGCCAAGCCAGGTCGAAAGCCAAAGGTTGCCGGTGCTGCGGTGGCTGGTGAGGAATCTAAGGCCAATGTCTCAGCTGAGAAAGAGAAGCAGAAGGAAGCAGAAGGCGAGGCAGCAGCTGAAGTGGAGCAGGGGGGATCTGCTGGTGGCGCTTCTACTGGAGGAAAGAAGCGCAGAAGGAAGGCTTGA
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| Protein seq | MAELGELEGKLRDVGEKLQSPPDDVDALLKLIHEAEIYILKVEQAPSESMISAITPAMKALIKKELLDNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRIVAILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTNCMTTIMILVIEEDDEVEIPIAECLLKHAKSELKETSAASFELAEKVIGACSEKLKPVFLQLLKGTSLNEYDNIIATICEDSSDVKEDMDADPSGKDVVDDGKLSERTISDELPQEPAKLEQDVTQTTAIGSGATPVDNGTESAAANPKELSNPDSEKKDGVKQSAKVANGASAETSERVDGSPAMVKSKRGRPPGLKSLEKKAAGKKVLGLKKVEETTDSTGKLSKQSSKDDSKSSTRKASGAGSSKKQQKISLKQKDETDSKEDTAKDLSLKEMVSPKSVSKGSAKTKGSQGQDNNGSKRKRSQEDEQETPRSRKNKGLDASLVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFVSEEQDKTPDVASEISPKPRGRGRKGRGSSVQLKEGNAETPKSGGGDLPKKRGRPKGSSNGTPKSNISATSSKSKGKAARKDENETPKVGSDLKKEAEEGSEDKATKSTEKTKDDLPEDGSNKSASKPKEASSGGKDLKGESKPSEGRAKPGRKPKVAGAAVAGEESKANVSAEKEKQKEAEGEAAAEVEQGGSAGGASTGGKKRRRKA |
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| Function | Sister chromatid cohesion protein PDS5 homolog A [UniProtKB/Swiss-Prot:Q5F3V3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os02g39920 | LOC_Os02g39920.1 | Chr02 | 24139753 | 24146705 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGGAGCTCGGGGAGCTCGAGGGGAAGCTGAGGGACGTCGGGGAGAAGCTCCAGTCTCCCCCCGACGACGTCGATGCCTTGCTCAAGCTCATCCACGAGGCCGAAATATATATATTGAAAGTGGAACAAGCACCTTCTGAAAGCATGATTAGTGCTATAACTCCAGCAATGAAAGCTTTGATCAAGAAAGAGCTGTTGGATAATTCTAGCTATGAGGTGAAACTTTCTGTGGTGTCCTGTATTTCTGAGATAACTAGGATCACTGCACCTGACACTCCATATGACGATGATGTCATGAAGGACGTGTTTTCCATAATGGTGGGGTCTTTTGAGAAATTGGATGATATGGAGAACCCCTTGTTTCGAAGGATAGTTGCAATCCTTGAAACTGTGGCAAAGGTCCGGCTATGCGTGGTGATGTTGGATCTTGAGTGTGAAGATCTGATACTGCAAATGTTTCACAACTTCTTCACAACTGTGAAACCAAATCACCCAGAAAATGTTACAAACTGTATGACTACAATAATGATTTTGGTAATTGAAGAGGATGATGAAGTTGAGATACCCATTGCAGAATGTCTGCTCAAGCATGCTAAGTCCGAACTGAAGGAAACTTCTGCTGCATCTTTTGAACTTGCAGAGAAGGTGATAGGTGCATGCTCTGAAAAACTGAAACCGGTCTTTCTGCAGTTACTTAAAGGCACTTCCTTGAATGAATATGACAATATTATCGCAACAATTTGTGAAGACAGTTCAGATGTCAAGGAAGACATGGATGCTGATCCTTCTGGAAAAGATGTGGTGGATGATGGCAAACTTTCTGAAAGGACTATTTCTGATGAGCTACCTCAGGAACCTGCAAAGTTGGAGCAAGATGTTACTCAGACTACTGCTATTGGCAGTGGTGCAACTCCAGTTGATAATGGCACAGAATCTGCAGCTGCTAATCCCAAGGAATTATCCAATCCCGATTCAGAGAAAAAGGATGGTGTTAAGCAGTCAGCAAAGGTTGCCAATGGAGCTTCTGCTGAAACATCAGAACGTGTTGATGGCTCACCAGCTATGGTCAAATCAAAAAGAGGTCGACCTCCTGGACTAAAGTCATTGGAGAAGAAGGCTGCTGGAAAGAAAGTTCTAGGTCTGAAAAAGGTTGAGGAGACTACTGATTCAACAGGGAAGTTATCGAAGCAGTCATCTAAGGATGATTCCAAGTCATCTACAAGAAAGGCAAGTGGAGCAGGGTCATCAAAAAAGCAACAAAAGATCAGTTTGAAACAGAAGGATGAAACTGACTCCAAGGAAGATACTGCTAAGGATCTGAGCCTAAAGGAAATGGTCTCTCCAAAGTCCGTGTCCAAGGGGTCAGCTAAGACCAAGGGCAGCCAAGGCCAGGACAATAATGGCTCCAAGAGGAAAAGGTCACAAGAGGATGAACAAGAGACTCCTCGTTCTAGGAAGAATAAAGGCCTTGATGCTAGCCTTGTTGGTGCAAGGATCCAAGTATGGTGGCCTGACGACAAGAAGTTTTACAAGGGCATTGTTGACTCATTTGATACAGCTTCAAAAAGGCACAAGATTGCATATGATGATGGAGATGTAGAGGTGCTTCTCCTTAGGGATGAAAAGTGGGAATTCGTCAGTGAGGAACAAGACAAAACCCCTGATGTGGCTTCCGAGATTTCCCCGAAGCCACGGGGTAGGGGCAGAAAAGGAAGAGGGAGCTCAGTGCAATTGAAGGAAGGAAATGCAGAAACACCTAAAAGTGGTGGAGGCGATCTTCCCAAAAAAAGGGGTCGTCCGAAAGGTTCCAGCAATGGTACACCCAAAAGTAACATCTCGGCAACTTCAAGCAAATCAAAGGGGAAAGCTGCAAGGAAGGATGAAAATGAGACACCTAAGGTTGGCAGTGACCTTAAGAAGGAAGCTGAAGAAGGATCCGAAGACAAAGCCACTAAGTCAACTGAGAAGACAAAGGATGATTTGCCTGAGGATGGTAGCAACAAGAGTGCCAGTAAACCAAAGGAGGCTAGCAGCGGAGGCAAGGATTTGAAGGGTGAGAGCAAACCAAGTGAAGGAAGAGCCAAGCCAGGTCGAAAGCCAAAGGTTGCCGGTGCTGCGGTGGCTGGTGAGGAATCTAAGGCCAATGTCTCAGCTGAGAAAGAGAAGCAGAAGGAAGCAGAAGGCGAGGCAGCAGCTGAAGTGGAGCAGGGGGGATCTGCTGGTGGCGCTTCTACTGGAGGAAAGAAGCGCAGAAGGAAGGCTTGA
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| Protein seq | MAELGELEGKLRDVGEKLQSPPDDVDALLKLIHEAEIYILKVEQAPSESMISAITPAMKALIKKELLDNSSYEVKLSVVSCISEITRITAPDTPYDDDVMKDVFSIMVGSFEKLDDMENPLFRRIVAILETVAKVRLCVVMLDLECEDLILQMFHNFFTTVKPNHPENVTNCMTTIMILVIEEDDEVEIPIAECLLKHAKSELKETSAASFELAEKVIGACSEKLKPVFLQLLKGTSLNEYDNIIATICEDSSDVKEDMDADPSGKDVVDDGKLSERTISDELPQEPAKLEQDVTQTTAIGSGATPVDNGTESAAANPKELSNPDSEKKDGVKQSAKVANGASAETSERVDGSPAMVKSKRGRPPGLKSLEKKAAGKKVLGLKKVEETTDSTGKLSKQSSKDDSKSSTRKASGAGSSKKQQKISLKQKDETDSKEDTAKDLSLKEMVSPKSVSKGSAKTKGSQGQDNNGSKRKRSQEDEQETPRSRKNKGLDASLVGARIQVWWPDDKKFYKGIVDSFDTASKRHKIAYDDGDVEVLLLRDEKWEFVSEEQDKTPDVASEISPKPRGRGRKGRGSSVQLKEGNAETPKSGGGDLPKKRGRPKGSSNGTPKSNISATSSKSKGKAARKDENETPKVGSDLKKEAEEGSEDKATKSTEKTKDDLPEDGSNKSASKPKEASSGGKDLKGESKPSEGRAKPGRKPKVAGAAVAGEESKANVSAEKEKQKEAEGEAAAEVEQGGSAGGASTGGKKRRRKA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.631843 | 1.931076 | 3.021149 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0612800 | RBH | 8.919925 | 4.323403 | 17.124744 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g42320 | RBH | 5.003244 | 4.463988 | 3.227009 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0612800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0024690 | RBH | 2.117397 | 19.772327 | 23.208807 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024840 | RBH | 0.514575 | 7.391487 | 8.375269 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024840 | RBH | 3.384863 | 13.751342 | 34.586582 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0024490 | RBH | 0.640451 | 0.679928 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0024380 | RBH | 14.271522 | 21.877308 | 50.087120 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0024210 | RBH | 0.660347 | 1.127838 | 5.135205 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0393100 | SBH | 22.952732 | 28.6512635 | 36.797375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0024460 | RBH | 0.483152 | 0.611272 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0024460 | RBH | 0.844654 | 28.234081 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024770 | RBH | 9.128278 | 58.878181 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0024480 | RBH | 2.068528 | 1.734761 | 3.780604 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0024230 | RBH | 1.070709 | 10.786420 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G024650 | RBH | 1.426939 | 12.570844 | 8.137789 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0024500 | RBH | 4.091683 | 46.449944 | 23.415834 |
