Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsMH63_05G0111900 | OGI:05019980 | 7/50 | Minghui 63 | MH63RS3 | HZAU | Chr05:7465833-7468475 | ||||||||
| Gene Symbol | - | ||||||||||
| Mutant | - | ||||||||||
| Stuctural Variations | NamRoo_MH63RS3_INS0514620,02428_MH63RS3_INS0513140_1,Basmati1_MH63RS3_DEL0512430,Y58S_MH63RS3_INS0507480,Lemont_MH63RS3_DEL0506800,Lemont_MH63RS3_DEL0507200,128077_MH63RS3_INS0514260,ZH11_MH63RS3_INS0515760,DG_MH63RS3_DEL0513400,DG_MH63RS3_DEL0513810,DHX2_MH63RS3_INS0515760,KY131_MH63RS3_INS0516860_2,IR64_MH63RS3_INS0522450,Kosh_MH63RS3_INS0516040,G8_MH63RS3_INS0519420,TM_MH63RS3_TRA0524390,TM_MH63RS3_DEL0524840,127564_MH63RS3_INS0508510,132278_MH63RS3_INS0513560,II32_MH63RS3_INS0509370,117425_MH63RS3_INS0514020,Azucena_MH63RS3_DEL0507290,Azucena_MH63RS3_DEL0507720,D62_MH63RS3_DEL0509670,D62_MH63RS3_DEL0510090,OglaRS2_MH63RS3_TRA0512200,OglaRS2_MH63RS3_INS0512210,Nipponbare_MH63RS3_INS0515930,127742_MH63RS3_INS0517280,LJ_MH63RS3_INS0514940,
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| DNA seq | TTAGGGTGTGACAAAAGCACAAATTGATTCAACTTTCTGCCATTCTAGTTCAGTAGGTGCAACTTCACCATGTTGATTTGCATAGCTATCCAGGACAGTTCTGTACATTAATCCTTCTACAATCATTTTATAGGTGGAATTCCATCTAGTCGGTGTATCAAAAGAAAAACTCAACTTCGAAGGAAGATTTTTCGAGTTTGCCATAGAATTGAAATCTTGCATTCTTGATACTGACGAATCTAAATGCTTCAACAACTCACGTAGCTTGTGTATTGTAGGTTTAATTATCTTCATACCATCCTGAACCAAAATATTTAGGATATGGGCACAACATCTAACATGCAAATGCTGACCCTCAAACATCAATGCATTCTTGTGATTCTTTATCAACTCTTGACATGCAGAATTGTTATTACTGCCATTATCTAAAGTTATAGTAAACAGTTTGCTTCTAATGCCCCAATATGTCAAGCAACTCATTATAGCTTCTTCAATGGCGAATCCCGTGTGGGGATACTTCAATTCCTTAAAGCTTATAATTTTCTTCTTAATGTTAAACTCTCTATCAATATAGTGTGCTGTGACAACCATGTAGCCTATATTTTGAATTGAAGTCCACATATCGGATGTTAGACATACGTGCGAATCAAGATTATGTAATTCAGCATGAAAGTCTTCCCTCATTCGCTCATACAAGTTAAAGGCATCATCACGAAGTGTTTGACGCCCCACAACTTTGAAAGTTGGCTGCATGGACTGAATAAGGATCCTCAATTTTCTTGAATGGCACCTCTGCATGAATGAAGAATCTGACCATTAGCTCCCGGCTTCTCTTGGGAACAAACACGAAACCTTCCCCAGTCTGTTTCTTAATTGTTGCAAGGAAGTTGATTCTAGCATCACCATCAATAGCTGGACATGATTCGGCTATGTGATTAATAAGGTGACTTGTTCCTAACTTTTTGGTGGCTGTCAATCTTAAGCTACAATATTTGCATTGAGTCATGGGGACACCATCTATCATTACAACCTCTTGCTGAAAGTGTTCCCATACTTTAGCTCTCTTACGTGTTCTTGAAGATTGATTATTATTTGGACTATTAGTACCTGAACTCTCTGACATTTGTATGGACATATTTATTATTGAGTTTGTTCAATTGTCTGCATAGAGGAAGAAATCTAAAATCAAGATAGTTGAAAGAACATGGTCTATAATTATTTTTTTCACACATTGTACACGTGCTACAATCTAAAAATTGCACACTAAAATTCGATTGACCATAGAATTAATTTGCATCTCAAAATCATATCAGGACTCAATCTGTAATGATACGTTAAATAATTTGCATTGGGAGATGAAGGGAACCTGCATTCACTATACCTCCTTATCTTCTTCTTGAAATCTTGGAACTCCTGCACATAAACCCATCGAAGATTGTAATCTTGAGCAAGTTAACTCCTCAGTAAAACCAACAAAAAAAACAAAATCTTATAGAAACTATCACACCAATCACACTGTTCACATACGTCGTGGTACTTGGGCTTCTCAGGGAGATTGGTGACGCGGCCGGACCGCCAGAGGAGGACATCCTCGCCAGCGCCCGGCGGCGCACGCACCTTCCTCTTCTTCTGCTTCACCTGCACCCGCAACCACCAAGATCAGGAAGAGACCCAAAAAAACACAAACAAAACAACCAGGATAGATCAAAGACTGAGAAAAACTAGGGAAAAAAAAGCAATGGTGGTGGAGGAGGGAATCTGACCGGCGACGGCTTGGCGGCGGATTCGTGGACGGTGGCGGGGAGGTGGAGGAGGCGAAGCAAGGGAAGGGAGCGGCGGCGGCGGAAGGAGTGGAGCCGTGGACGACTGATGACGCTAGGTTTGGAGAGTACTGGACTGTCTAGTGCATCCAAAGAAATCCATGGACTGAATCCAATTTGGATCCAAAAATCAGAAACCAAAAACCAATCCAATCCAAACCGTTTCCACCTCCACCCTAACCAGTCCAGCCCATTAAACTCCTCAATCCATTTCCATCCATCCAAACTACACCCAAAGCTGAAACCAATCCATTGGGCCCATTTCAATCCAGCCCATTGGCAGGCTTAGGTCCAATGGGCTGAGACAGCAGCCGAAGAGAAAGTCGGAACAGCAATCATCTCTGAGGCCGGCCGCCGGCCCGTCAGAAACAGCAAGTTCAAATGAAGGAAATGTACACGGTGATGGTGGAAGGCGCCTTCATGAGAAAACGCACCATAGAGCAGTGCTGGATCTAGAAATTTTTGTTACCTTAAGCAAGTCTAATTAATAACGCCAACGGATATATAACAAATTCATGTAACTCTATAGACTGTACCATACAACAATTTTTTATCGTATTCTAATTTAAAGGAAAACAATGGTTGTGTTTTTACAGACTAAGGGACTTAGAAATTTATTATCTTGAAAAGAAAAAAAATCAACATGAGTGCTAGAAAATTTACTGTCTTTATGTTACAGACATCTAATAGTTTGCAATTAAGTAATGGGTACACTGATCTAATAAATAATGATGGTGCTTCAGGTTATTCTAAATGGTTTTGTCTCTAACATCTATTAACAGAATATAAAAACGTACTTAGGGCACTCACAATAGAGATCCAT
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| CDS seq | MDLYCECPNPWISLDALDSPVLSKPSVISRPRLHSFRRRRSLPLLRLLHLPATVHESAAKPSPVKQKKRKVRAPPGAGEDVLLWRSGRVTNLPEKPKYHDEFQDFKKKIRRQLNKLNNKYVHTNVREFSLRLTATKKLGTSHLINHIAESCPAIDGDARINFLATIKKQTGEGFVFVPKRSRELMPTFKVVGRQTLRDDAFNLYERMREDFHAELHNLDSHDGMKIIKPTIHKLRELLKHLDSSVSRMQDFNSMANSKNLPSKLSFSFDTPTRWNSTYKMIVEGLMYRTVLDSYANQHGEVAPTELEWQKVESICAFVTP |
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| Protein seq | MDLYCECPNPWISLDALDSPVLSKPSVISRPRLHSFRRRRSLPLLRLLHLPATVHESAAKPSPVKQKKRKVRAPPGAGEDVLLWRSGRVTNLPEKPKYHDEFQDFKKKIRRQLNKLNNKYVHTNVREFSLRLTATKKLGTSHLINHIAESCPAIDGDARINFLATIKKQTGEGFVFVPKRSRELMPTFKVVGRQTLRDDAFNLYERMREDFHAELHNLDSHDGMKIIKPTIHKLRELLKHLDSSVSRMQDFNSMANSKNLPSKLSFSFDTPTRWNSTYKMIVEGLMYRTVLDSYANQHGEVAPTELEWQKVESICAFVTP |
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| Function | B3 domain-containing protein Os06g0194400 [UniProtKB/Swiss-Prot:Q69V36] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsMH63_05G0111900 | OsMH63_05T0111900.1 | Chr05 | 7465833 | 7468475 | - | maker | ||
| CDS seq | ATGGATCTCTATTGTGAGTGCCCTAATCCATGGATTTCTTTGGATGCACTAGACAGTCCAGTACTCTCCAAACCTAGCGTCATCAGTCGTCCACGGCTCCACTCCTTCCGCCGCCGCCGCTCCCTTCCCTTGCTTCGCCTCCTCCACCTCCCCGCCACCGTCCACGAATCCGCCGCCAAGCCGTCGCCGGTGAAGCAGAAGAAGAGGAAGGTGCGTGCGCCGCCGGGCGCTGGCGAGGATGTCCTCCTCTGGCGGTCCGGCCGCGTCACCAATCTCCCTGAGAAGCCCAAGTACCACGACGAGTTCCAAGATTTCAAGAAGAAGATAAGGAGACAATTGAACAAACTCAATAATAAATATGTCCATACAAATGTCAGAGAGTTCAGCTTAAGATTGACAGCCACCAAAAAGTTAGGAACAAGTCACCTTATTAATCACATAGCCGAATCATGTCCAGCTATTGATGGTGATGCTAGAATCAACTTCCTTGCAACAATTAAGAAACAGACTGGGGAAGGTTTCGTGTTTGTTCCCAAGAGAAGCCGGGAGCTAATGCCAACTTTCAAAGTTGTGGGGCGTCAAACACTTCGTGATGATGCCTTTAACTTGTATGAGCGAATGAGGGAAGACTTTCATGCTGAATTACATAATCTTGATTCGCACGATGGTATGAAGATAATTAAACCTACAATACACAAGCTACGTGAGTTGTTGAAGCATTTAGATTCGTCAGTATCAAGAATGCAAGATTTCAATTCTATGGCAAACTCGAAAAATCTTCCTTCGAAGTTGAGTTTTTCTTTTGATACACCGACTAGATGGAATTCCACCTATAAAATGATTGTAGAAGGATTAATGTACAGAACTGTCCTGGATAGCTATGCAAATCAACATGGTGAAGTTGCACCTACTGAACTAGAATGGCAGAAAGTTGAATCAATTTGTGCTTTTGTCACACCCTAA
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| Protein seq | MDLYCECPNPWISLDALDSPVLSKPSVISRPRLHSFRRRRSLPLLRLLHLPATVHESAAKPSPVKQKKRKVRAPPGAGEDVLLWRSGRVTNLPEKPKYHDEFQDFKKKIRRQLNKLNNKYVHTNVREFSLRLTATKKLGTSHLINHIAESCPAIDGDARINFLATIKKQTGEGFVFVPKRSRELMPTFKVVGRQTLRDDAFNLYERMREDFHAELHNLDSHDGMKIIKPTIHKLRELLKHLDSSVSRMQDFNSMANSKNLPSKLSFSFDTPTRWNSTYKMIVEGLMYRTVLDSYANQHGEVAPTELEWQKVESICAFVTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0 | 0 | 0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0219300 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g12780 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0219300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0127600 | SBH | 4.172153 | 4.1675955 | 17.5621085 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Os XI: R9311 | R9311 | AGIS | R9311C05g19063 | SBH | None | None | None |
| Os XI-adm: HZ | HZ | PKU | OsHZ_05g0095100 | SBH | None | None | None |
| Os XI-adm: J4155S | J4155S | PKU | OsJ4155_05g0095400 | SBH | None | None | None |
| Os XI-adm: LK638S | LK638S | PKU | OsLK638S_05g0092600 | SBH | None | None | None |
| Os XI-adm: XL628S | XL628S | PKU | OsXL628S_05g0095800 | SBH | None | None | None |
| Os GJ-temp: 02428 | 02428 | SICAU | Os02428G0508369200.01 | SBH | None | None | None |
| Os cB: Basmati1 | Basmati1 | SICAU | OsBasmati1G0518313800.01 | SBH | None | None | None |
| Os O.glaberrima: Ogla | OglaRS2 | DIADE | NA | NA | NA | NA | NA |
| Os XI-1A: CN1 | CN1 | SICAU | OsCN1G0515646000.01 | RBH | None | None | None |
| Os XI-1A: D62 | D62 | SICAU | OsD62G0517619600.01 | SBH | None | None | None |
| Os XI-1A: DG | DG | SICAU | OsDGG0509613400.01 | SBH | None | None | None |
| Os GJ-temp: DHX2 | DHX2 | SICAU | OsDHX2G0510979400.01 | SBH | None | None | None |
| Os XI-adm: FH838 | FH838 | SICAU | OsFH838G0513231000.01 | RBH | None | None | None |
| Os XI-1A: FS32 | FS32 | SICAU | OsFS32G0509764200.01 | RBH | None | None | None |
| Os XI-1A: G46 | G46 | SICAU | NA | NA | NA | NA | NA |
| Os XI-adm: G630 | G630 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: G8 | G8 | SICAU | OsG8G0510356200.01 | SBH | None | None | None |
| Os XI-1A: II32 | II32 | SICAU | OsII32G0517398000.01 | SBH | None | None | None |
| Os XI-1B: J4155 | J4155 | SICAU | OsJ4155G0510694400.01 | SBH | None | None | None |
| Os GJ-temp: Kosh | Kosh | SICAU | OsKoshG0511130400.01 | SBH | None | None | None |
| Os GJ-temp: KY131 | KY131 | SICAU | NA | NA | NA | NA | NA |
| Os GJ-trp: Lemont | Lemont | SICAU | OsLemontG0508372200.01 | SBH | None | None | None |
| Os GJ-adm: LJ | LJ | SICAU | OsLJG0508373400.01 | SBH | None | None | None |
| Os GJ-sbtrp: NamRoo | NamRoo | SICAU | OsNamRooG0510923000.01 | SBH | None | None | None |
| Os XI-1B: R498 | R498 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: R527 | R527 | SICAU | NA | NA | NA | NA | NA |
| Os XI-1B: S548 | S548 | SICAU | OsS548G0522338600.01 | RBH | None | None | None |
| Os XI-2: TM | TM | SICAU | TMG0513460600.01 | SBH | None | None | None |
| Os XI-3: Tumba | Tumba | SICAU | OsTumbaG0508615800.01 | RBH | None | None | None |
| Os XI-adm: WSSM | WSSM | SICAU | OsWSSMG0508306400.01 | SBH | None | None | None |
| Os XI-1B: Y3551 | Y3551 | SICAU | OsY3551G0510433000.01 | SBH | None | None | None |
| Os XI-1B: Y58S | Y58S | SICAU | OsY58SG0510676600.01 | SBH | None | None | None |
| Os XI-adm: YX1 | YX1 | SICAU | OsYX1G0513987200.01 | SBH | None | None | None |
| Os GJ-temp: ZH11 | ZH11 | SICAU | OsZH11G0508947000.01 | SBH | None | None | None |
